RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 HIKESHIQ53FT3 197 aa16.98■□□□□ 0.31
MBD3-209ENST00000592012 FBXW9Q5XUX1 488 aa16.98■□□□□ 0.31
MBD3-209ENST00000592012 ACOT7LQ6ZUV0 252 aa16.98■□□□□ 0.31
MBD3-209ENST00000592012 MRPL21Q7Z2W9 205 aaKnown RBP16.98■□□□□ 0.31
MBD3-209ENST00000592012 Q8NFD4 153 aa16.98■□□□□ 0.31
MBD3-209ENST00000592012 DYRK2Q92630 601 aa16.98■□□□□ 0.31
MBD3-209ENST00000592012 SPDEFO95238 335 aa16.97■□□□□ 0.31
MBD3-209ENST00000592012 OR5H8P0DN80 308 aa16.97■□□□□ 0.31
MBD3-209ENST00000592012 PSMB6P28072 239 aa16.97■□□□□ 0.31
MBD3-209ENST00000592012 PMP22Q01453 160 aa16.97■□□□□ 0.31
MBD3-209ENST00000592012 ATXN7L3Q14CW9 347 aaPredicted RBP16.97■□□□□ 0.31
MBD3-209ENST00000592012 PDCD1Q15116 288 aa16.97■□□□□ 0.31
MBD3-209ENST00000592012 TOR2AQ5JU69 321 aa16.97■□□□□ 0.31
MBD3-209ENST00000592012 COQ8AQ8NI60 647 aa16.97■□□□□ 0.31
MBD3-209ENST00000592012 THAP6Q8TBB0 222 aa16.97■□□□□ 0.31
MBD3-209ENST00000592012 HPSE2Q8WWQ2 592 aa16.97■□□□□ 0.31
MBD3-209ENST00000592012 MARVELD3Q96A59 401 aa16.97■□□□□ 0.31
MBD3-209ENST00000592012 WDR13Q9H1Z4 485 aa16.97■□□□□ 0.31
MBD3-209ENST00000592012 LIME1Q9H400 295 aa16.97■□□□□ 0.31
MBD3-209ENST00000592012 CHMP1AQ9HD42 196 aaPredicted RBP16.97■□□□□ 0.31
MBD3-209ENST00000592012 ZNF629Q9UEG4 869 aaPredicted RBP16.97■□□□□ 0.31
MBD3-209ENST00000592012 SHANK1Q9Y566 2161 aa16.97■□□□□ 0.31
MBD3-209ENST00000592012 SPENQ96T58 3664 aaKnown RBP16.97■□□□□ 0.31
MBD3-209ENST00000592012 PDCD6O75340 191 aa16.97■□□□□ 0.31
MBD3-209ENST00000592012 ADAP1O75689 374 aa16.97■□□□□ 0.31
MBD3-209ENST00000592012 CST4P01036 141 aa16.97■□□□□ 0.31
MBD3-209ENST00000592012 ECI1P42126 302 aa16.97■□□□□ 0.31
MBD3-209ENST00000592012 CCL11P51671 97 aa16.97■□□□□ 0.31
MBD3-209ENST00000592012 CYCSP99999 105 aaKnown RBP16.97■□□□□ 0.31
MBD3-209ENST00000592012 DHRS11Q6UWP2 260 aa16.97■□□□□ 0.31
MBD3-209ENST00000592012 FDCSPQ8NFU4 85 aa16.97■□□□□ 0.31
MBD3-209ENST00000592012 OR1K1Q8NGR3 316 aa16.97■□□□□ 0.31
MBD3-209ENST00000592012 VRK1Q99986 396 aaPredicted RBP16.97■□□□□ 0.31
MBD3-209ENST00000592012 GP6Q9HCN6 339 aa16.97■□□□□ 0.31
MBD3-209ENST00000592012 KNG1P01042 644 aa16.96■□□□□ 0.31
MBD3-209ENST00000592012 PGAM2P15259 253 aa16.96■□□□□ 0.31
MBD3-209ENST00000592012 CEACAM21Q3KPI0 293 aa16.96■□□□□ 0.31
MBD3-209ENST00000592012 ANGPTL6Q8NI99 470 aa16.96■□□□□ 0.31
MBD3-209ENST00000592012 BCL2L2Q92843 193 aaPredicted RBP16.96■□□□□ 0.31
MBD3-209ENST00000592012 MICU1Q9BPX6 476 aa16.96■□□□□ 0.31
MBD3-209ENST00000592012 MBD2Q9UBB5 411 aa16.96■□□□□ 0.31
MBD3-209ENST00000592012 C14orf166Q9Y224 244 aaKnown RBP16.96■□□□□ 0.31
MBD3-209ENST00000592012 MPTX1A8MV57 137 aa16.96■□□□□ 0.31
MBD3-209ENST00000592012 CLN3Q13286 438 aa16.96■□□□□ 0.31
MBD3-209ENST00000592012 POM121Q96HA1 1249 aa16.96■□□□□ 0.31
MBD3-209ENST00000592012 NECAP2Q9NVZ3 263 aa16.96■□□□□ 0.31
MBD3-209ENST00000592012 ZNF175Q9Y473 711 aa16.96■□□□□ 0.31
MBD3-209ENST00000592012 FAM221AA4D161 298 aa16.95■□□□□ 0.3
MBD3-209ENST00000592012 RLN2P04090 185 aa16.95■□□□□ 0.3
MBD3-209ENST00000592012 WT1P19544 449 aaPredicted RBP16.95■□□□□ 0.3
MBD3-209ENST00000592012 FUT3P21217 361 aa16.95■□□□□ 0.3
MBD3-209ENST00000592012 HAAOP46952 286 aa16.95■□□□□ 0.3
MBD3-209ENST00000592012 GPM6AP51674 278 aa16.95■□□□□ 0.3
MBD3-209ENST00000592012 AANATQ16613 207 aa16.95■□□□□ 0.3
MBD3-209ENST00000592012 BEX5Q5H9J7 111 aa16.95■□□□□ 0.3
MBD3-209ENST00000592012 RGS7BPQ6MZT1 257 aaPredicted RBP16.95■□□□□ 0.3
MBD3-209ENST00000592012 ZDHHC23Q8IYP9 409 aa16.95■□□□□ 0.3
MBD3-209ENST00000592012 BATF2Q8N1L9 274 aa16.95■□□□□ 0.3
MBD3-209ENST00000592012 OR5M9Q8NGP3 310 aa16.95■□□□□ 0.3
MBD3-209ENST00000592012 RNF126Q9BV68 326 aa16.95■□□□□ 0.3
MBD3-209ENST00000592012 PDGFAP04085 211 aa16.95■□□□□ 0.3
MBD3-209ENST00000592012 PTGER4P35408 488 aa16.95■□□□□ 0.3
MBD3-209ENST00000592012 WNT5AP41221 380 aa16.95■□□□□ 0.3
MBD3-209ENST00000592012 ST8SIA2Q92186 375 aa16.95■□□□□ 0.3
MBD3-209ENST00000592012 TRBV6-7A0A0A0MS04 114 aa16.94■□□□□ 0.3
MBD3-209ENST00000592012 KANTRA0A1W2PQU2 76 aa16.94■□□□□ 0.3
MBD3-209ENST00000592012 POM121CA8CG34 1229 aa16.94■□□□□ 0.3
MBD3-209ENST00000592012 OR7C1O76099 320 aaPredicted RBP16.94■□□□□ 0.3
MBD3-209ENST00000592012 CTSDP07339 412 aaPredicted RBP16.94■□□□□ 0.3
MBD3-209ENST00000592012 DPPA2Q7Z7J5 298 aa16.94■□□□□ 0.3
MBD3-209ENST00000592012 MARS2Q96GW9 593 aaKnown RBP16.94■□□□□ 0.3
MBD3-209ENST00000592012 DMRTA2Q96SC8 542 aa16.94■□□□□ 0.3
MBD3-209ENST00000592012 CD300LBA8K4G0 201 aa16.94■□□□□ 0.3
MBD3-209ENST00000592012 I3L521 148 aa16.94■□□□□ 0.3
MBD3-209ENST00000592012 BCL2L11O43521 198 aa16.94■□□□□ 0.3
MBD3-209ENST00000592012 BCL3P20749 454 aa16.94■□□□□ 0.3
MBD3-209ENST00000592012 APLNRP35414 380 aa16.94■□□□□ 0.3
MBD3-209ENST00000592012 PMELP40967 661 aa16.94■□□□□ 0.3
MBD3-209ENST00000592012 UBA52P62987 128 aaKnown RBP16.94■□□□□ 0.3
MBD3-209ENST00000592012 ELP2Q6IA86 826 aa16.94■□□□□ 0.3
MBD3-209ENST00000592012 Q6ZPA2 131 aa16.94■□□□□ 0.3
MBD3-209ENST00000592012 SAXO1Q8IYX7 474 aa16.94■□□□□ 0.3
MBD3-209ENST00000592012 INO80EQ8NBZ0 244 aaPredicted RBP16.94■□□□□ 0.3
MBD3-209ENST00000592012 OR10C1Q96KK4 312 aa16.94■□□□□ 0.3
MBD3-209ENST00000592012 ZNF75AQ96N20 296 aa16.94■□□□□ 0.3
MBD3-209ENST00000592012 OPA3Q9H6K4 179 aa16.94■□□□□ 0.3
MBD3-209ENST00000592012 MED9Q9NWA0 146 aa16.94■□□□□ 0.3
MBD3-209ENST00000592012 ZNF732B4DXR9 585 aa16.93■□□□□ 0.3
MBD3-209ENST00000592012 F8VVB4 439 aa16.93■□□□□ 0.3
MBD3-209ENST00000592012 F8VWA3 439 aa16.93■□□□□ 0.3
MBD3-209ENST00000592012 LRP3O75074 770 aa16.93■□□□□ 0.3
MBD3-209ENST00000592012 ZNF205O95201 554 aa16.93■□□□□ 0.3
MBD3-209ENST00000592012 TMEM211Q6ICI0 200 aa16.93■□□□□ 0.3
MBD3-209ENST00000592012 IGFL2Q6UWQ7 119 aa16.93■□□□□ 0.3
MBD3-209ENST00000592012 TMEM200AQ86VY9 491 aa16.93■□□□□ 0.3
MBD3-209ENST00000592012 SLAMF9Q96A28 289 aa16.93■□□□□ 0.3
MBD3-209ENST00000592012 GMPPAQ96IJ6 420 aaPredicted RBP16.93■□□□□ 0.3
MBD3-209ENST00000592012 CXorf58Q96LI9 332 aa16.93■□□□□ 0.3
MBD3-209ENST00000592012 METTL8Q9H825 291 aaKnown RBP16.93■□□□□ 0.3
MBD3-209ENST00000592012 ARID1AO14497 2285 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms