RNA–Protein interactions for RNA: ENST00000590653.5

LINC01140-210, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 1 (best) BASIC

Gene LINC01140, Length 3,315 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-210ENST00000590653 HNF4GQ14541 408 aa9.56□□□□□ -0.88
LINC01140-210ENST00000590653 PPA1Q15181 289 aa9.56□□□□□ -0.88
LINC01140-210ENST00000590653 UNQ6494/PRO21346Q6UXR6 183 aa9.56□□□□□ -0.88
LINC01140-210ENST00000590653 Q6ZS52 159 aa9.56□□□□□ -0.88
LINC01140-210ENST00000590653 TMEM123Q8N131 208 aa9.56□□□□□ -0.88
LINC01140-210ENST00000590653 CYB561D1Q8N8Q1 229 aa9.56□□□□□ -0.88
LINC01140-210ENST00000590653 RBM24Q9BX46 236 aaKnown RBP9.56□□□□□ -0.88
LINC01140-210ENST00000590653 AK3Q9UIJ7 227 aa9.56□□□□□ -0.88
LINC01140-210ENST00000590653 CCDC187A0A096LP49 1063 aa9.55□□□□□ -0.88
LINC01140-210ENST00000590653 RBFOX3A6NFN3 312 aa9.55□□□□□ -0.88
LINC01140-210ENST00000590653 TLCD2A6NGC4 264 aa9.55□□□□□ -0.88
LINC01140-210ENST00000590653 SERPINE3A8MV23 424 aa9.55□□□□□ -0.88
LINC01140-210ENST00000590653 CDX1P47902 265 aaPredicted RBP9.55□□□□□ -0.88
LINC01140-210ENST00000590653 ERVFRD-1P60508 538 aa9.55□□□□□ -0.88
LINC01140-210ENST00000590653 RND3P61587 244 aa9.55□□□□□ -0.88
LINC01140-210ENST00000590653 SLC22A25Q6T423 547 aa9.55□□□□□ -0.88
LINC01140-210ENST00000590653 ZNF610Q8N9Z0 462 aa9.55□□□□□ -0.88
LINC01140-210ENST00000590653 LYPD6BQ8NI32 183 aa9.55□□□□□ -0.88
LINC01140-210ENST00000590653 SUCNR1Q9BXA5 334 aa9.55□□□□□ -0.88
LINC01140-210ENST00000590653 TREM2Q9NZC2 230 aa9.55□□□□□ -0.88
LINC01140-210ENST00000590653 TUBD1Q9UJT1 453 aa9.55□□□□□ -0.88
LINC01140-210ENST00000590653 HS3ST3B1Q9Y662 390 aa9.55□□□□□ -0.88
LINC01140-210ENST00000590653 C5orf67F2Z3F1 127 aa9.55□□□□□ -0.88
LINC01140-210ENST00000590653 SSSCA1O60232 199 aa9.55□□□□□ -0.88
LINC01140-210ENST00000590653 ATP6V0CP27449 155 aa9.55□□□□□ -0.88
LINC01140-210ENST00000590653 NKX6-1P78426 367 aaPredicted RBP9.55□□□□□ -0.88
LINC01140-210ENST00000590653 SURF2Q15527 256 aaPredicted RBP9.55□□□□□ -0.88
LINC01140-210ENST00000590653 PRAMEF20Q5VT98 475 aa9.55□□□□□ -0.88
LINC01140-210ENST00000590653 OR2T2Q6IF00 324 aa9.55□□□□□ -0.88
LINC01140-210ENST00000590653 ZNF429Q86V71 674 aa9.55□□□□□ -0.88
LINC01140-210ENST00000590653 CCDC54Q8NEL0 328 aa9.55□□□□□ -0.88
LINC01140-210ENST00000590653 NOXO1Q8NFA2 376 aa9.55□□□□□ -0.88
LINC01140-210ENST00000590653 NAA60Q9H7X0 242 aa9.55□□□□□ -0.88
LINC01140-210ENST00000590653 METTL7AQ9H8H3 244 aa9.55□□□□□ -0.88
LINC01140-210ENST00000590653 GFOD1Q9NXC2 390 aa9.55□□□□□ -0.88
LINC01140-210ENST00000590653 ANAPC10Q9UM13 185 aa9.55□□□□□ -0.88
LINC01140-210ENST00000590653 H3BMH7 237 aa9.54□□□□□ -0.88
LINC01140-210ENST00000590653 PPP1R2P9O14990 202 aa9.54□□□□□ -0.88
LINC01140-210ENST00000590653 ZNHIT1O43257 154 aa9.54□□□□□ -0.88
LINC01140-210ENST00000590653 GALNSP34059 522 aa9.54□□□□□ -0.88
LINC01140-210ENST00000590653 FAM89BQ8N5H3 189 aa9.54□□□□□ -0.88
LINC01140-210ENST00000590653 SLC39A7Q92504 469 aa9.54□□□□□ -0.88
LINC01140-210ENST00000590653 NTNG2Q96CW9 530 aa9.54□□□□□ -0.88
LINC01140-210ENST00000590653 NUDT16L1Q9BRJ7 211 aaKnown RBP9.54□□□□□ -0.88
LINC01140-210ENST00000590653 MRPL13Q9BYD1 178 aaKnown RBP9.54□□□□□ -0.88
LINC01140-210ENST00000590653 SLC2A9Q9NRM0 540 aa9.54□□□□□ -0.88
LINC01140-210ENST00000590653 ALKBH4Q9NXW9 302 aa9.54□□□□□ -0.88
LINC01140-210ENST00000590653 PLEK2Q9NYT0 353 aa9.54□□□□□ -0.88
LINC01140-210ENST00000590653 NKX2-6A6NCS4 301 aa9.54□□□□□ -0.88
LINC01140-210ENST00000590653 ANKUB1A6NFN9 424 aa9.54□□□□□ -0.88
LINC01140-210ENST00000590653 SOD3P08294 240 aa9.54□□□□□ -0.88
LINC01140-210ENST00000590653 CD63P08962 238 aa9.54□□□□□ -0.88
LINC01140-210ENST00000590653 PGA4P0DJD7 388 aa9.54□□□□□ -0.88
LINC01140-210ENST00000590653 PGA3P0DJD8 388 aa9.54□□□□□ -0.88
LINC01140-210ENST00000590653 CSNK1A1P48729 337 aa9.54□□□□□ -0.88
LINC01140-210ENST00000590653 EWSR1Q01844 656 aaKnown RBP eCLIP9.54□□□□□ -0.88
LINC01140-210ENST00000590653 DLX2Q07687 328 aaPredicted RBP9.54□□□□□ -0.88
LINC01140-210ENST00000590653 ZP4Q12836 540 aa9.54□□□□□ -0.88
LINC01140-210ENST00000590653 TMEM187Q14656 261 aa9.54□□□□□ -0.88
LINC01140-210ENST00000590653 FAM189A2Q15884 450 aa9.54□□□□□ -0.88
LINC01140-210ENST00000590653 CLEC12BQ2HXU8 276 aa9.54□□□□□ -0.88
LINC01140-210ENST00000590653 PIGYQ3MUY2 71 aa9.54□□□□□ -0.88
LINC01140-210ENST00000590653 ZNF574Q6ZN55 896 aaPredicted RBP9.54□□□□□ -0.88
LINC01140-210ENST00000590653 C7orf61Q8IZ16 206 aa9.54□□□□□ -0.88
LINC01140-210ENST00000590653 RHBDD1Q8TEB9 315 aa9.54□□□□□ -0.88
LINC01140-210ENST00000590653 MUCL1Q96DR8 90 aa9.54□□□□□ -0.88
LINC01140-210ENST00000590653 GINS3Q9BRX5 216 aa9.54□□□□□ -0.88
LINC01140-210ENST00000590653 CHST5Q9GZS9 411 aa9.54□□□□□ -0.88
LINC01140-210ENST00000590653 FBRSQ9HAH7 460 aa9.54□□□□□ -0.88
LINC01140-210ENST00000590653 TMEM131Q92545 1883 aa9.54□□□□□ -0.88
LINC01140-210ENST00000590653 ARHGAP21Q5T5U3 1957 aa9.54□□□□□ -0.88
LINC01140-210ENST00000590653 H3BP45 60 aa9.54□□□□□ -0.88
LINC01140-210ENST00000590653 DUSP1P28562 367 aa9.54□□□□□ -0.88
LINC01140-210ENST00000590653 RAB1AP62820 205 aa9.54□□□□□ -0.88
LINC01140-210ENST00000590653 KIAA0895LQ68EN5 471 aa9.54□□□□□ -0.88
LINC01140-210ENST00000590653 SLC25A24Q6NUK1 477 aa9.54□□□□□ -0.88
LINC01140-210ENST00000590653 COMMD1Q8N668 190 aa9.54□□□□□ -0.88
LINC01140-210ENST00000590653 SLC35G3Q8N808 338 aa9.54□□□□□ -0.88
LINC01140-210ENST00000590653 ST8SIA1Q92185 356 aa9.54□□□□□ -0.88
LINC01140-210ENST00000590653 INTS12Q96CB8 462 aaKnown RBP9.54□□□□□ -0.88
LINC01140-210ENST00000590653 CD207Q9UJ71 328 aa9.54□□□□□ -0.88
LINC01140-210ENST00000590653 TRBV11-1A0A0K0K1C0 115 aa9.53□□□□□ -0.88
LINC01140-210ENST00000590653 MSTNO14793 375 aa9.53□□□□□ -0.88
LINC01140-210ENST00000590653 HIST1H2BKO60814 126 aa9.53□□□□□ -0.88
LINC01140-210ENST00000590653 HIST1H2BJP06899 126 aa9.53□□□□□ -0.88
LINC01140-210ENST00000590653 POU2F2P09086 479 aa9.53□□□□□ -0.88
LINC01140-210ENST00000590653 HIST1H2BOP23527 126 aa9.53□□□□□ -0.88
LINC01140-210ENST00000590653 HIST1H2BBP33778 126 aa9.53□□□□□ -0.88
LINC01140-210ENST00000590653 HIST1H2BDP58876 126 aa9.53□□□□□ -0.88
LINC01140-210ENST00000590653 HIST1H2BCP62807 126 aa9.53□□□□□ -0.88
LINC01140-210ENST00000590653 USF2Q15853 346 aaPredicted RBP9.53□□□□□ -0.88
LINC01140-210ENST00000590653 HIST2H2BEQ16778 126 aa9.53□□□□□ -0.88
LINC01140-210ENST00000590653 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.53□□□□□ -0.88
LINC01140-210ENST00000590653 C9orf50Q5SZB4 431 aa9.53□□□□□ -0.88
LINC01140-210ENST00000590653 OR10G3Q8NGC4 313 aa9.53□□□□□ -0.88
LINC01140-210ENST00000590653 HIST1H2BHQ93079 126 aa9.53□□□□□ -0.88
LINC01140-210ENST00000590653 ZDHHC12Q96GR4 267 aa9.53□□□□□ -0.88
LINC01140-210ENST00000590653 HIST1H2BNQ99877 126 aa9.53□□□□□ -0.88
LINC01140-210ENST00000590653 HIST1H2BMQ99879 126 aa9.53□□□□□ -0.88
LINC01140-210ENST00000590653 SMOC1Q9H4F8 434 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms