RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 UNQ6126/PRO20091Q6UXV3 157 aa6.43□□□□□ -1.38
ZNF540-206ENST00000589117 Q6ZS46 218 aa6.43□□□□□ -1.38
ZNF540-206ENST00000589117 USP34Q70CQ2 3546 aa6.43□□□□□ -1.38
ZNF540-206ENST00000589117 RNF144BQ7Z419 303 aa6.43□□□□□ -1.38
ZNF540-206ENST00000589117 C6orf201Q7Z4U5 140 aa6.43□□□□□ -1.38
ZNF540-206ENST00000589117 GGNQ86UU5 652 aa6.43□□□□□ -1.38
ZNF540-206ENST00000589117 OSR2Q8N2R0 312 aa6.43□□□□□ -1.38
ZNF540-206ENST00000589117 SPERTQ8NA61 448 aa6.43□□□□□ -1.38
ZNF540-206ENST00000589117 SLC30A7Q8NEW0 376 aa6.43□□□□□ -1.38
ZNF540-206ENST00000589117 FNDC9Q8TBE3 224 aa6.43□□□□□ -1.38
ZNF540-206ENST00000589117 NARS2Q96I59 477 aaKnown RBP6.43□□□□□ -1.38
ZNF540-206ENST00000589117 FAM173AQ9BQD7 235 aa6.43□□□□□ -1.38
ZNF540-206ENST00000589117 ZNF2Q9BSG1 426 aaPredicted RBP6.43□□□□□ -1.38
ZNF540-206ENST00000589117 LDAHQ9H6V9 325 aa6.43□□□□□ -1.38
ZNF540-206ENST00000589117 P4HTMQ9NXG6 502 aa6.43□□□□□ -1.38
ZNF540-206ENST00000589117 GSKIPQ9P0R6 139 aa6.43□□□□□ -1.38
ZNF540-206ENST00000589117 LRFN1Q9P244 771 aa6.43□□□□□ -1.38
ZNF540-206ENST00000589117 NOSIPQ9Y314 301 aaKnown RBP6.43□□□□□ -1.38
ZNF540-206ENST00000589117 ZNF816-ZNF321PA0A0X1KG74 233 aa6.43□□□□□ -1.38
ZNF540-206ENST00000589117 TSPAN4O14817 238 aa6.43□□□□□ -1.38
ZNF540-206ENST00000589117 SYNGR4O95473 234 aa6.43□□□□□ -1.38
ZNF540-206ENST00000589117 APOC3P02656 99 aa6.43□□□□□ -1.38
ZNF540-206ENST00000589117 LYL1P12980 280 aa6.43□□□□□ -1.38
ZNF540-206ENST00000589117 PMELP40967 661 aa6.43□□□□□ -1.38
ZNF540-206ENST00000589117 RPL11P62913 178 aaKnown RBP6.43□□□□□ -1.38
ZNF540-206ENST00000589117 PPIAP62937 165 aaKnown RBP6.43□□□□□ -1.38
ZNF540-206ENST00000589117 PSG4Q00888 419 aa6.43□□□□□ -1.38
ZNF540-206ENST00000589117 BTN1A1Q13410 526 aa6.43□□□□□ -1.38
ZNF540-206ENST00000589117 STK11Q15831 433 aa6.43□□□□□ -1.38
ZNF540-206ENST00000589117 ABLIM2Q6H8Q1 611 aa6.43□□□□□ -1.38
ZNF540-206ENST00000589117 ZNF585AQ6P3V2 769 aa6.43□□□□□ -1.38
ZNF540-206ENST00000589117 UNQ6494/PRO21346Q6UXR6 183 aa6.43□□□□□ -1.38
ZNF540-206ENST00000589117 ASCL4Q6XD76 172 aa6.43□□□□□ -1.38
ZNF540-206ENST00000589117 CT55Q8WUE5 264 aa6.43□□□□□ -1.38
ZNF540-206ENST00000589117 ROBO4Q8WZ75 1007 aa6.43□□□□□ -1.38
ZNF540-206ENST00000589117 ARL11Q969Q4 196 aa6.43□□□□□ -1.38
ZNF540-206ENST00000589117 TMEM230Q96A57 120 aa6.43□□□□□ -1.38
ZNF540-206ENST00000589117 TMEM45BQ96B21 275 aa6.43□□□□□ -1.38
ZNF540-206ENST00000589117 ZNF75AQ96N20 296 aa6.43□□□□□ -1.38
ZNF540-206ENST00000589117 AQP10Q96PS8 301 aa6.43□□□□□ -1.38
ZNF540-206ENST00000589117 RNF126Q9BV68 326 aa6.43□□□□□ -1.38
ZNF540-206ENST00000589117 OR2H1Q9GZK4 316 aa6.43□□□□□ -1.38
ZNF540-206ENST00000589117 GPR35Q9HC97 309 aa6.43□□□□□ -1.38
ZNF540-206ENST00000589117 IL36GQ9NZH8 169 aa6.43□□□□□ -1.38
ZNF540-206ENST00000589117 C21orf140B9A014 251 aa6.42□□□□□ -1.38
ZNF540-206ENST00000589117 LGALS8O00214 317 aa6.42□□□□□ -1.38
ZNF540-206ENST00000589117 ADAP1O75689 374 aa6.42□□□□□ -1.38
ZNF540-206ENST00000589117 SFTPBP07988 381 aa6.42□□□□□ -1.38
ZNF540-206ENST00000589117 PI3P19957 117 aa6.42□□□□□ -1.38
ZNF540-206ENST00000589117 GLP1RP43220 463 aa6.42□□□□□ -1.38
ZNF540-206ENST00000589117 CLDN15P56746 228 aa6.42□□□□□ -1.38
ZNF540-206ENST00000589117 SUPT4H1P63272 117 aaKnown RBP6.42□□□□□ -1.38
ZNF540-206ENST00000589117 PDZK1IP1Q13113 114 aa6.42□□□□□ -1.38
ZNF540-206ENST00000589117 TAF9Q16594 264 aa6.42□□□□□ -1.38
ZNF540-206ENST00000589117 DMRTC1Q5HYR2 192 aa6.42□□□□□ -1.38
ZNF540-206ENST00000589117 FAM74A1Q5RGS3 127 aa6.42□□□□□ -1.38
ZNF540-206ENST00000589117 TMEM42Q69YG0 159 aa6.42□□□□□ -1.38
ZNF540-206ENST00000589117 DHRS11Q6UWP2 260 aa6.42□□□□□ -1.38
ZNF540-206ENST00000589117 ZBTB44Q8NCP5 570 aa6.42□□□□□ -1.38
ZNF540-206ENST00000589117 OR2AE1Q8NHA4 323 aa6.42□□□□□ -1.38
ZNF540-206ENST00000589117 AKR7LQ8NHP1 331 aa6.42□□□□□ -1.38
ZNF540-206ENST00000589117 THOC3Q96J01 351 aaKnown RBP6.42□□□□□ -1.38
ZNF540-206ENST00000589117 C16orf92Q96LL3 132 aa6.42□□□□□ -1.38
ZNF540-206ENST00000589117 IP6K3Q96PC2 410 aa6.42□□□□□ -1.38
ZNF540-206ENST00000589117 ALKBH3Q96Q83 286 aaPredicted RBP6.42□□□□□ -1.38
ZNF540-206ENST00000589117 FAAP24Q9BTP7 215 aa6.42□□□□□ -1.38
ZNF540-206ENST00000589117 SLC6A15Q9H2J7 730 aa6.42□□□□□ -1.38
ZNF540-206ENST00000589117 ZNF286AQ9HBT8 521 aa6.42□□□□□ -1.38
ZNF540-206ENST00000589117 DECR2Q9NUI1 292 aa6.42□□□□□ -1.38
ZNF540-206ENST00000589117 GPR160Q9UJ42 338 aa6.42□□□□□ -1.38
ZNF540-206ENST00000589117 MCTS1Q9ULC4 181 aaKnown RBP6.42□□□□□ -1.38
ZNF540-206ENST00000589117 PHF3Q92576 2039 aaKnown RBP6.42□□□□□ -1.38
ZNF540-206ENST00000589117 C5orf63A6NC05 138 aa6.42□□□□□ -1.38
ZNF540-206ENST00000589117 PDGFBP01127 241 aaPredicted RBP6.42□□□□□ -1.38
ZNF540-206ENST00000589117 HOXB5P09067 269 aa6.42□□□□□ -1.38
ZNF540-206ENST00000589117 ZNF728P0DKX0 622 aa6.42□□□□□ -1.38
ZNF540-206ENST00000589117 ACKR3P25106 362 aa6.42□□□□□ -1.38
ZNF540-206ENST00000589117 S100A10P60903 97 aa6.42□□□□□ -1.38
ZNF540-206ENST00000589117 RPS18P62269 152 aaKnown RBP6.42□□□□□ -1.38
ZNF540-206ENST00000589117 DEFA5Q01523 94 aa6.42□□□□□ -1.38
ZNF540-206ENST00000589117 OR8B8Q15620 311 aa6.42□□□□□ -1.38
ZNF540-206ENST00000589117 IAH1Q2TAA2 248 aaPredicted RBP6.42□□□□□ -1.38
ZNF540-206ENST00000589117 ANKRD55Q3KP44 614 aa6.42□□□□□ -1.38
ZNF540-206ENST00000589117 PLCXD3Q63HM9 321 aa6.42□□□□□ -1.38
ZNF540-206ENST00000589117 TMEM211Q6ICI0 200 aa6.42□□□□□ -1.38
ZNF540-206ENST00000589117 TMEM200AQ86VY9 491 aa6.42□□□□□ -1.38
ZNF540-206ENST00000589117 OR51F2Q8NH61 342 aa6.42□□□□□ -1.38
ZNF540-206ENST00000589117 LHFPL5Q8TAF8 219 aa6.42□□□□□ -1.38
ZNF540-206ENST00000589117 SAT2Q96F10 170 aaPredicted RBP6.42□□□□□ -1.38
ZNF540-206ENST00000589117 ADGRG7Q96K78 797 aa6.42□□□□□ -1.38
ZNF540-206ENST00000589117 SUCNR1Q9BXA5 334 aa6.42□□□□□ -1.38
ZNF540-206ENST00000589117 C1QTNF6Q9BXI9 259 aa6.42□□□□□ -1.38
ZNF540-206ENST00000589117 PRRG4Q9BZD6 226 aa6.42□□□□□ -1.38
ZNF540-206ENST00000589117 LINC00470Q9BZP3 86 aa6.42□□□□□ -1.38
ZNF540-206ENST00000589117 WDR13Q9H1Z4 485 aa6.42□□□□□ -1.38
ZNF540-206ENST00000589117 ST3GAL6Q9Y274 331 aa6.42□□□□□ -1.38
ZNF540-206ENST00000589117 WDR87Q6ZQQ6 2873 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 IGKV3D-15A0A087WSY6 115 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 PIGBOS1A0A0B4J2F0 54 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 CRYM-AS1A6NIL9 109 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms