RNA–Protein interactions for RNA: ENST00000589055.3

TMEM259-206, Transcript of transmembrane protein 259, human

TSL 3

Gene TMEM259, Length 791 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM259-206	ENST00000589055	CITED1	Q99966	193 aa		13	□□□□□ -0.33
TMEM259-206	ENST00000589055	FRRS1L	Q9P0K9	344 aa		13	□□□□□ -0.33
TMEM259-206	ENST00000589055	SF3B6	Q9Y3B4	125 aa	Known RBP	13	□□□□□ -0.33
TMEM259-206	ENST00000589055	WNK1	Q9H4A3	2382 aa		13	□□□□□ -0.33
TMEM259-206	ENST00000589055	PRKDC	P78527	4128 aa	Known RBP	12.99	□□□□□ -0.33
TMEM259-206	ENST00000589055	TMEM82	A0PJX8	343 aa		12.99	□□□□□ -0.33
TMEM259-206	ENST00000589055	SLC16A6	O15403	523 aa		12.99	□□□□□ -0.33
TMEM259-206	ENST00000589055	ZNF737	O75373	536 aa		12.99	□□□□□ -0.33
TMEM259-206	ENST00000589055	GATB	O75879	557 aa	Known RBP	12.99	□□□□□ -0.33
TMEM259-206	ENST00000589055	NPBWR2	P48146	333 aa		12.99	□□□□□ -0.33
TMEM259-206	ENST00000589055	FUT6	P51993	359 aa		12.99	□□□□□ -0.33
TMEM259-206	ENST00000589055	DLX6	P56179	175 aa		12.99	□□□□□ -0.33
TMEM259-206	ENST00000589055	PROK1	P58294	105 aa		12.99	□□□□□ -0.33
TMEM259-206	ENST00000589055	RPL15	P61313	204 aa	Known RBP	12.99	□□□□□ -0.33
TMEM259-206	ENST00000589055	ZNF91	Q05481	1191 aa		12.99	□□□□□ -0.33
TMEM259-206	ENST00000589055	ACSM1	Q08AH1	577 aa		12.99	□□□□□ -0.33
TMEM259-206	ENST00000589055	OCLN	Q16625	522 aa		12.99	□□□□□ -0.33
TMEM259-206	ENST00000589055	TCF23	Q7RTU1	214 aa		12.99	□□□□□ -0.33
TMEM259-206	ENST00000589055	TPRX1	Q8N7U7	411 aa		12.99	□□□□□ -0.33
TMEM259-206	ENST00000589055	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	12.99	□□□□□ -0.33
TMEM259-206	ENST00000589055	BEND2	Q8NDZ0	799 aa		12.99	□□□□□ -0.33
TMEM259-206	ENST00000589055	TRUB1	Q8WWH5	349 aa	Known RBP	12.99	□□□□□ -0.33
TMEM259-206	ENST00000589055	EMG1	Q92979	244 aa	Known RBP	12.99	□□□□□ -0.33
TMEM259-206	ENST00000589055	RFT1	Q96AA3	541 aa		12.99	□□□□□ -0.33
TMEM259-206	ENST00000589055	FGGY	Q96C11	551 aa		12.99	□□□□□ -0.33
TMEM259-206	ENST00000589055	PPA2	Q9H2U2	334 aa		12.99	□□□□□ -0.33
TMEM259-206	ENST00000589055	AMBN	Q9NP70	447 aa		12.99	□□□□□ -0.33
TMEM259-206	ENST00000589055	RBFOX1	Q9NWB1	397 aa	Known RBP	12.99	□□□□□ -0.33
TMEM259-206	ENST00000589055	GMPPB	Q9Y5P6	360 aa		12.99	□□□□□ -0.33
TMEM259-206	ENST00000589055		J3QLW9	94 aa		12.98	□□□□□ -0.33
TMEM259-206	ENST00000589055		K7N7A8	449 aa		12.98	□□□□□ -0.33
TMEM259-206	ENST00000589055	IGHA1	P01876	353 aa		12.98	□□□□□ -0.33
TMEM259-206	ENST00000589055	ZNF19	P17023	458 aa		12.98	□□□□□ -0.33
TMEM259-206	ENST00000589055	GABRB1	P18505	474 aa		12.98	□□□□□ -0.33
TMEM259-206	ENST00000589055	BCL3	P20749	454 aa		12.98	□□□□□ -0.33
TMEM259-206	ENST00000589055	AZGP1	P25311	298 aa	Known RBP	12.98	□□□□□ -0.33
TMEM259-206	ENST00000589055	DUSP1	P28562	367 aa		12.98	□□□□□ -0.33
TMEM259-206	ENST00000589055	EDDM3B	P56851	147 aa		12.98	□□□□□ -0.33
TMEM259-206	ENST00000589055	ACTC1	P68032	377 aa		12.98	□□□□□ -0.33
TMEM259-206	ENST00000589055	ACTA1	P68133	377 aa		12.98	□□□□□ -0.33
TMEM259-206	ENST00000589055	EDDM3A	Q14507	147 aa		12.98	□□□□□ -0.33
TMEM259-206	ENST00000589055	CNN3	Q15417	329 aa	Known RBP	12.98	□□□□□ -0.33
TMEM259-206	ENST00000589055	PLA1A	Q53H76	456 aa		12.98	□□□□□ -0.33
TMEM259-206	ENST00000589055	SLC25A30	Q5SVS4	291 aa		12.98	□□□□□ -0.33
TMEM259-206	ENST00000589055	ZFP1	Q6P2D0	407 aa		12.98	□□□□□ -0.33
TMEM259-206	ENST00000589055	LHFPL4	Q7Z7J7	247 aa		12.98	□□□□□ -0.33
TMEM259-206	ENST00000589055	EGFL6	Q8IUX8	553 aa		12.98	□□□□□ -0.33
TMEM259-206	ENST00000589055	ENTHD1	Q8IYW4	607 aa		12.98	□□□□□ -0.33
TMEM259-206	ENST00000589055	DYNAP	Q8N1N2	210 aa		12.98	□□□□□ -0.33
TMEM259-206	ENST00000589055	PELI1	Q96FA3	418 aa		12.98	□□□□□ -0.33
TMEM259-206	ENST00000589055	C4orf36	Q96KX1	117 aa		12.98	□□□□□ -0.33
TMEM259-206	ENST00000589055	SPACA5	Q96QH8	159 aa		12.98	□□□□□ -0.33
TMEM259-206	ENST00000589055	SSX3	Q99909	188 aa		12.98	□□□□□ -0.33
TMEM259-206	ENST00000589055	CHST6	Q9GZX3	395 aa		12.98	□□□□□ -0.33
TMEM259-206	ENST00000589055	MYRF	Q9Y2G1	1151 aa		12.98	□□□□□ -0.33
TMEM259-206	ENST00000589055	SIGLEC9	Q9Y336	463 aa		12.98	□□□□□ -0.33
TMEM259-206	ENST00000589055	DSCAML1	Q8TD84	2053 aa		12.97	□□□□□ -0.33
TMEM259-206	ENST00000589055	HTR1A	P08908	422 aa		12.97	□□□□□ -0.33
TMEM259-206	ENST00000589055	ZNF20	P17024	532 aa		12.97	□□□□□ -0.33
TMEM259-206	ENST00000589055	TMEM244	Q5VVB8	128 aa		12.97	□□□□□ -0.33
TMEM259-206	ENST00000589055	MEDAG	Q5VYS4	303 aa		12.97	□□□□□ -0.33
TMEM259-206	ENST00000589055	LHFPL3	Q86UP9	236 aa		12.97	□□□□□ -0.33
TMEM259-206	ENST00000589055	OR52N4	Q8NGI2	321 aa		12.97	□□□□□ -0.33
TMEM259-206	ENST00000589055	OR5R1	Q8NH85	324 aa		12.97	□□□□□ -0.33
TMEM259-206	ENST00000589055	PPP1R35	Q8TAP8	253 aa		12.97	□□□□□ -0.33
TMEM259-206	ENST00000589055	PP6455	Q8WZ26	134 aa		12.97	□□□□□ -0.33
TMEM259-206	ENST00000589055	FAM234A	Q9H0X4	552 aa		12.97	□□□□□ -0.33
TMEM259-206	ENST00000589055	ISG20L2	Q9H9L3	353 aa	Known RBP	12.97	□□□□□ -0.33
TMEM259-206	ENST00000589055	S100A14	Q9HCY8	104 aa		12.97	□□□□□ -0.33
TMEM259-206	ENST00000589055	EXOG	Q9Y2C4	368 aa	Known RBP	12.97	□□□□□ -0.33
TMEM259-206	ENST00000589055	KMT2C	Q8NEZ4	4911 aa	Known RBP	12.96	□□□□□ -0.33
TMEM259-206	ENST00000589055	MEGF11	A6BM72	1044 aa		12.96	□□□□□ -0.33
TMEM259-206	ENST00000589055	OR4C45	A6NMZ5	311 aa		12.96	□□□□□ -0.33
TMEM259-206	ENST00000589055	CLPX	O76031	633 aa		12.96	□□□□□ -0.33
TMEM259-206	ENST00000589055	HAND1	O96004	215 aa		12.96	□□□□□ -0.33
TMEM259-206	ENST00000589055	SERPINA3	P01011	423 aa		12.96	□□□□□ -0.33
TMEM259-206	ENST00000589055	CHRM2	P08172	466 aa		12.96	□□□□□ -0.33
TMEM259-206	ENST00000589055	DBT	P11182	482 aa	Known RBP	12.96	□□□□□ -0.33
TMEM259-206	ENST00000589055	ATF1	P18846	271 aa		12.96	□□□□□ -0.33
TMEM259-206	ENST00000589055	RBP2	P50120	134 aa		12.96	□□□□□ -0.33
TMEM259-206	ENST00000589055	ATP1B3	P54709	279 aa		12.96	□□□□□ -0.33
TMEM259-206	ENST00000589055	LRRC75B	Q2VPJ9	315 aa		12.96	□□□□□ -0.33
TMEM259-206	ENST00000589055	LDLRAD2	Q5SZI1	272 aa		12.96	□□□□□ -0.33
TMEM259-206	ENST00000589055	ASPHD2	Q6ICH7	369 aa		12.96	□□□□□ -0.33
TMEM259-206	ENST00000589055	SLC35E4	Q6ICL7	350 aa		12.96	□□□□□ -0.33
TMEM259-206	ENST00000589055	FDX2	Q6P4F2	183 aa		12.96	□□□□□ -0.33
TMEM259-206	ENST00000589055	ACBD7	Q8N6N7	88 aa		12.96	□□□□□ -0.33
TMEM259-206	ENST00000589055	CCDC54	Q8NEL0	328 aa		12.96	□□□□□ -0.33
TMEM259-206	ENST00000589055	OR5D18	Q8NGL1	313 aa		12.96	□□□□□ -0.33
TMEM259-206	ENST00000589055	OR13C3	Q8NGS6	347 aa		12.96	□□□□□ -0.33
TMEM259-206	ENST00000589055	OR13C9	Q8NGT0	318 aa		12.96	□□□□□ -0.33
TMEM259-206	ENST00000589055	ALG8	Q9BVK2	526 aa		12.96	□□□□□ -0.33
TMEM259-206	ENST00000589055	C16orf95	Q9H693	158 aa		12.96	□□□□□ -0.33
TMEM259-206	ENST00000589055	HEXA-AS1	Q9H8Q6	139 aa		12.96	□□□□□ -0.33
TMEM259-206	ENST00000589055	NBEAL2	Q6ZNJ1	2754 aa		12.96	□□□□□ -0.34
TMEM259-206	ENST00000589055	IGKV1-12	A0A0C4DH73	117 aa		12.95	□□□□□ -0.34
TMEM259-206	ENST00000589055		A0A1W2PPH5	198 aa		12.95	□□□□□ -0.34
TMEM259-206	ENST00000589055	C17orf98	A8MV24	154 aa		12.95	□□□□□ -0.34
TMEM259-206	ENST00000589055		E9PI62	339 aa		12.95	□□□□□ -0.34
TMEM259-206	ENST00000589055	CHST1	O43916	411 aa		12.95	□□□□□ -0.34

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