RNA–Protein interactions for RNA: ENST00000588762.5

GHDC-209, Transcript of GH3 domain containing, humanhuman

TSL 1 (best)

Gene GHDC, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-209ENST00000588762 GP2P55259 537 aaKnown RBP12.94□□□□□ -0.34
GHDC-209ENST00000588762 SEC61A1P61619 476 aaKnown RBP12.94□□□□□ -0.34
GHDC-209ENST00000588762 IL13RA1P78552 427 aa12.94□□□□□ -0.34
GHDC-209ENST00000588762 LCN2P80188 198 aa12.94□□□□□ -0.34
GHDC-209ENST00000588762 KRTAP1-1Q07627 177 aa12.94□□□□□ -0.34
GHDC-209ENST00000588762 CRIP3Q6Q6R5 217 aa12.94□□□□□ -0.34
GHDC-209ENST00000588762 CD200R1LQ6Q8B3 271 aa12.94□□□□□ -0.34
GHDC-209ENST00000588762 GLCCI1Q86VQ1 547 aa12.94□□□□□ -0.34
GHDC-209ENST00000588762 FAM58AQ8N1B3 248 aa12.94□□□□□ -0.34
GHDC-209ENST00000588762 PXT1Q8NFP0 134 aa12.94□□□□□ -0.34
GHDC-209ENST00000588762 ANGPTL6Q8NI99 470 aa12.94□□□□□ -0.34
GHDC-209ENST00000588762 PPIL3Q9H2H8 161 aaKnown RBP12.94□□□□□ -0.34
GHDC-209ENST00000588762 GSX1Q9H4S2 264 aaPredicted RBP12.94□□□□□ -0.34
GHDC-209ENST00000588762 YAE1D1Q9NRH1 226 aa12.94□□□□□ -0.34
GHDC-209ENST00000588762 RBFOX1Q9NWB1 397 aaKnown RBP12.94□□□□□ -0.34
GHDC-209ENST00000588762 OR14J1Q9UGF5 321 aa12.94□□□□□ -0.34
GHDC-209ENST00000588762 ING4Q9UNL4 249 aa12.94□□□□□ -0.34
GHDC-209ENST00000588762 IGKV1D-17A0A075B6S4 117 aa12.93□□□□□ -0.34
GHDC-209ENST00000588762 TRAV20A0A0B4J274 112 aa12.93□□□□□ -0.34
GHDC-209ENST00000588762 IGKV1-12A0A0C4DH73 117 aa12.93□□□□□ -0.34
GHDC-209ENST00000588762 TRIM64CA6NLI5 447 aa12.93□□□□□ -0.34
GHDC-209ENST00000588762 RFPL4AA6NLU0 287 aa12.93□□□□□ -0.34
GHDC-209ENST00000588762 RFPL4AL1F8VTS6 287 aa12.93□□□□□ -0.34
GHDC-209ENST00000588762 F8VVB4 439 aa12.93□□□□□ -0.34
GHDC-209ENST00000588762 F8VWA3 439 aa12.93□□□□□ -0.34
GHDC-209ENST00000588762 PHF1O43189 567 aaPredicted RBP12.93□□□□□ -0.34
GHDC-209ENST00000588762 NDUFB3O43676 98 aa12.93□□□□□ -0.34
GHDC-209ENST00000588762 KDM4BO94953 1096 aa12.93□□□□□ -0.34
GHDC-209ENST00000588762 IGKV1D-12P01611 117 aa12.93□□□□□ -0.34
GHDC-209ENST00000588762 PRKACAP17612 351 aa12.93□□□□□ -0.34
GHDC-209ENST00000588762 PRDX2P32119 198 aa12.93□□□□□ -0.34
GHDC-209ENST00000588762 OR3A4PP47883 348 aa12.93□□□□□ -0.34
GHDC-209ENST00000588762 BMXP51813 675 aa12.93□□□□□ -0.34
GHDC-209ENST00000588762 DVL1P1P54792 670 aaPredicted RBP12.93□□□□□ -0.34
GHDC-209ENST00000588762 RSU1Q15404 277 aa12.93□□□□□ -0.34
GHDC-209ENST00000588762 GLT8D1Q68CQ7 371 aa12.93□□□□□ -0.34
GHDC-209ENST00000588762 ZNF788Q6ZQV5 615 aa12.93□□□□□ -0.34
GHDC-209ENST00000588762 LRRTM1Q86UE6 522 aa12.93□□□□□ -0.34
GHDC-209ENST00000588762 TMEM186Q96B77 213 aa12.93□□□□□ -0.34
GHDC-209ENST00000588762 FOXRED1Q96CU9 486 aaPredicted RBP12.93□□□□□ -0.34
GHDC-209ENST00000588762 METTL9Q9H1A3 318 aa12.93□□□□□ -0.34
GHDC-209ENST00000588762 HMG20AQ9NP66 347 aa12.93□□□□□ -0.34
GHDC-209ENST00000588762 EXOSC4Q9NPD3 245 aaKnown RBP12.93□□□□□ -0.34
GHDC-209ENST00000588762 PCDHB16Q9NRJ7 776 aa12.93□□□□□ -0.34
GHDC-209ENST00000588762 CTSZQ9UBR2 303 aa12.93□□□□□ -0.34
GHDC-209ENST00000588762 OR5V1Q9UGF6 321 aa12.93□□□□□ -0.34
GHDC-209ENST00000588762 GLS2Q9UI32 602 aa12.93□□□□□ -0.34
GHDC-209ENST00000588762 STUB1Q9UNE7 303 aa12.93□□□□□ -0.34
GHDC-209ENST00000588762 SSR3Q9UNL2 185 aa12.93□□□□□ -0.34
GHDC-209ENST00000588762 TEP1Q99973 2627 aaKnown RBP12.92□□□□□ -0.34
GHDC-209ENST00000588762 A8MXK9 166 aa12.92□□□□□ -0.34
GHDC-209ENST00000588762 DVL1O14640 695 aa12.92□□□□□ -0.34
GHDC-209ENST00000588762 CD36P16671 472 aa12.92□□□□□ -0.34
GHDC-209ENST00000588762 JUNBP17275 347 aaPredicted RBP12.92□□□□□ -0.34
GHDC-209ENST00000588762 MYL9P24844 172 aa12.92□□□□□ -0.34
GHDC-209ENST00000588762 ZFP36P26651 326 aaKnown RBP12.92□□□□□ -0.34
GHDC-209ENST00000588762 IKZF1Q13422 519 aa12.92□□□□□ -0.34
GHDC-209ENST00000588762 LRRC10Q5BKY1 277 aa12.92□□□□□ -0.34
GHDC-209ENST00000588762 SPIN3Q5JUX0 258 aa12.92□□□□□ -0.34
GHDC-209ENST00000588762 CD276Q5ZPR3 534 aa12.92□□□□□ -0.34
GHDC-209ENST00000588762 WDR25Q64LD2 544 aaPredicted RBP12.92□□□□□ -0.34
GHDC-209ENST00000588762 ASCL4Q6XD76 172 aa12.92□□□□□ -0.34
GHDC-209ENST00000588762 ZNF841Q6ZN19 808 aa12.92□□□□□ -0.34
GHDC-209ENST00000588762 FAM216BQ8N7L0 139 aa12.92□□□□□ -0.34
GHDC-209ENST00000588762 GAFA1Q96PS6 74 aa12.92□□□□□ -0.34
GHDC-209ENST00000588762 NKX3-1Q99801 234 aaPredicted RBP12.92□□□□□ -0.34
GHDC-209ENST00000588762 UQCC2Q9BRT2 126 aa12.92□□□□□ -0.34
GHDC-209ENST00000588762 HIF1ANQ9NWT6 349 aa12.92□□□□□ -0.34
GHDC-209ENST00000588762 KCNS2Q9ULS6 477 aa12.92□□□□□ -0.34
GHDC-209ENST00000588762 GSTK1Q9Y2Q3 226 aa12.92□□□□□ -0.34
GHDC-209ENST00000588762 MRPS28Q9Y2Q9 187 aaKnown RBP12.92□□□□□ -0.34
GHDC-209ENST00000588762 A8MV72 311 aaPredicted RBP12.91□□□□□ -0.34
GHDC-209ENST00000588762 SIGLEC5O15389 551 aa12.91□□□□□ -0.34
GHDC-209ENST00000588762 CDRT1O95170 752 aa12.91□□□□□ -0.34
GHDC-209ENST00000588762 CSTBP04080 98 aaKnown RBP12.91□□□□□ -0.34
GHDC-209ENST00000588762 TFF1P04155 84 aa12.91□□□□□ -0.34
GHDC-209ENST00000588762 SFTPBP07988 381 aa12.91□□□□□ -0.34
GHDC-209ENST00000588762 CALCBP10092 127 aa12.91□□□□□ -0.34
GHDC-209ENST00000588762 ADRA2CP18825 462 aa12.91□□□□□ -0.34
GHDC-209ENST00000588762 AMY2BP19961 511 aa12.91□□□□□ -0.34
GHDC-209ENST00000588762 FGF9P31371 208 aaPredicted RBP12.91□□□□□ -0.34
GHDC-209ENST00000588762 MTNR1BP49286 362 aa12.91□□□□□ -0.34
GHDC-209ENST00000588762 CAPZA1P52907 286 aa12.91□□□□□ -0.34
GHDC-209ENST00000588762 SNU13P55769 128 aaKnown RBP12.91□□□□□ -0.34
GHDC-209ENST00000588762 GPR176Q14439 515 aa12.91□□□□□ -0.34
GHDC-209ENST00000588762 C22orf42Q6IC83 251 aa12.91□□□□□ -0.34
GHDC-209ENST00000588762 C1QL2Q7Z5L3 287 aa12.91□□□□□ -0.34
GHDC-209ENST00000588762 ZNF561Q8N587 486 aa12.91□□□□□ -0.34
GHDC-209ENST00000588762 CD177Q8N6Q3 437 aa12.91□□□□□ -0.34
GHDC-209ENST00000588762 ST8SIA4Q92187 359 aa12.91□□□□□ -0.34
GHDC-209ENST00000588762 SDSLQ96GA7 329 aa12.91□□□□□ -0.34
GHDC-209ENST00000588762 MRPS26Q9BYN8 205 aaKnown RBP12.91□□□□□ -0.34
GHDC-209ENST00000588762 CNTD2Q9H8S5 307 aa12.91□□□□□ -0.34
GHDC-209ENST00000588762 IL36GQ9NZH8 169 aa12.91□□□□□ -0.34
GHDC-209ENST00000588762 ZNF222Q9UK12 451 aa12.91□□□□□ -0.34
GHDC-209ENST00000588762 POLR3KQ9Y2Y1 108 aaPredicted RBP12.91□□□□□ -0.34
GHDC-209ENST00000588762 HIVEP2P31629 2446 aa12.9□□□□□ -0.34
GHDC-209ENST00000588762 LOC105371242A0A075B767 164 aa12.9□□□□□ -0.34
GHDC-209ENST00000588762 TRAV1-2A0A0B4J238 106 aa12.9□□□□□ -0.34
GHDC-209ENST00000588762 PPIAL4CA0A0B4J2A2 164 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms