RNA–Protein interactions for RNA: ENST00000588713.1

LIG3-211, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-211ENST00000588713 EFNB2P52799 333 aa3.61□□□□□ -1.83
LIG3-211ENST00000588713 AKR1C2P52895 323 aa3.61□□□□□ -1.83
LIG3-211ENST00000588713 SUCLG1P53597 346 aaKnown RBP3.61□□□□□ -1.83
LIG3-211ENST00000588713 UCP2P55851 309 aa3.61□□□□□ -1.83
LIG3-211ENST00000588713 SLC26A5P58743 744 aa3.61□□□□□ -1.83
LIG3-211ENST00000588713 TAS2R60P59551 318 aa3.61□□□□□ -1.83
LIG3-211ENST00000588713 SPCS3P61009 180 aa3.61□□□□□ -1.83
LIG3-211ENST00000588713 RPS15AP62244 130 aaKnown RBP3.61□□□□□ -1.83
LIG3-211ENST00000588713 IL13RA1P78552 427 aa3.61□□□□□ -1.83
LIG3-211ENST00000588713 SRSF3P84103 164 aaKnown RBP3.61□□□□□ -1.83
LIG3-211ENST00000588713 AKR1C1Q04828 323 aa3.61□□□□□ -1.83
LIG3-211ENST00000588713 FOXO1Q12778 655 aa3.61□□□□□ -1.83
LIG3-211ENST00000588713 PLA2G7Q13093 441 aa3.61□□□□□ -1.83
LIG3-211ENST00000588713 TAF13Q15543 124 aa3.61□□□□□ -1.83
LIG3-211ENST00000588713 ELAVL1Q15717 326 aaKnown RBP3.61□□□□□ -1.83
LIG3-211ENST00000588713 CR1LQ2VPA4 569 aa3.61□□□□□ -1.83
LIG3-211ENST00000588713 FBXL19-AS1Q494R0 122 aa3.61□□□□□ -1.83
LIG3-211ENST00000588713 C1orf100Q5SVJ3 147 aa3.61□□□□□ -1.83
LIG3-211ENST00000588713 RIPPLY2Q5TAB7 128 aa3.61□□□□□ -1.83
LIG3-211ENST00000588713 YOD1Q5VVQ6 348 aaPredicted RBP3.61□□□□□ -1.83
LIG3-211ENST00000588713 METRNLQ641Q3 311 aa3.61□□□□□ -1.83
LIG3-211ENST00000588713 OR52W1Q6IF63 320 aa3.61□□□□□ -1.83
LIG3-211ENST00000588713 LEG1Q6P5S2 330 aa3.61□□□□□ -1.83
LIG3-211ENST00000588713 ULK3Q6PHR2 472 aa3.61□□□□□ -1.83
LIG3-211ENST00000588713 FIP1L1Q6UN15 594 aaKnown RBP3.61□□□□□ -1.83
LIG3-211ENST00000588713 DHRS11Q6UWP2 260 aa3.61□□□□□ -1.83
LIG3-211ENST00000588713 UNQ6126/PRO20091Q6UXV3 157 aa3.61□□□□□ -1.83
LIG3-211ENST00000588713 TTLL10Q6ZVT0 673 aa3.61□□□□□ -1.83
LIG3-211ENST00000588713 COX15Q7KZN9 410 aa3.61□□□□□ -1.83
LIG3-211ENST00000588713 SLC29A4Q7RTT9 530 aa3.61□□□□□ -1.83
LIG3-211ENST00000588713 REC114Q7Z4M0 266 aa3.61□□□□□ -1.83
LIG3-211ENST00000588713 ZNF440Q8IYI8 595 aa3.61□□□□□ -1.83
LIG3-211ENST00000588713 KDM8Q8N371 416 aa3.61□□□□□ -1.83
LIG3-211ENST00000588713 ARRDC1Q8N5I2 433 aa3.61□□□□□ -1.83
LIG3-211ENST00000588713 LMNTD1Q8N9Z9 388 aa3.61□□□□□ -1.83
LIG3-211ENST00000588713 C7orf57Q8NEG2 295 aa3.61□□□□□ -1.83
LIG3-211ENST00000588713 OR2A1Q8NGT9 310 aa3.61□□□□□ -1.83
LIG3-211ENST00000588713 OR9A4Q8NGU2 314 aa3.61□□□□□ -1.83
LIG3-211ENST00000588713 OR13D1Q8NGV5 346 aa3.61□□□□□ -1.83
LIG3-211ENST00000588713 OR4K13Q8NH42 304 aa3.61□□□□□ -1.83
LIG3-211ENST00000588713 OR5R1Q8NH85 324 aa3.61□□□□□ -1.83
LIG3-211ENST00000588713 MRAPQ8TCY5 172 aa3.61□□□□□ -1.83
LIG3-211ENST00000588713 FAM216AQ8WUB2 273 aa3.61□□□□□ -1.83
LIG3-211ENST00000588713 MRGPRFQ96AM1 343 aa3.61□□□□□ -1.83
LIG3-211ENST00000588713 Q96M85 177 aa3.61□□□□□ -1.83
LIG3-211ENST00000588713 YPEL4Q96NS1 127 aa3.61□□□□□ -1.83
LIG3-211ENST00000588713 CLCC1Q96S66 551 aa3.61□□□□□ -1.83
LIG3-211ENST00000588713 SERINC2Q96SA4 455 aa3.61□□□□□ -1.83
LIG3-211ENST00000588713 SULT4A1Q9BR01 284 aa3.61□□□□□ -1.83
LIG3-211ENST00000588713 LMF2Q9BU23 707 aaKnown RBP3.61□□□□□ -1.83
LIG3-211ENST00000588713 GGACTQ9BVM4 153 aa3.61□□□□□ -1.83
LIG3-211ENST00000588713 SELENOIQ9C0D9 397 aa3.61□□□□□ -1.83
LIG3-211ENST00000588713 CHST5Q9GZS9 411 aa3.61□□□□□ -1.83
LIG3-211ENST00000588713 SLC5A7Q9GZV3 580 aa3.61□□□□□ -1.83
LIG3-211ENST00000588713 CHST6Q9GZX3 395 aa3.61□□□□□ -1.83
LIG3-211ENST00000588713 LAT2Q9GZY6 243 aa3.61□□□□□ -1.83
LIG3-211ENST00000588713 CST11Q9H112 138 aa3.61□□□□□ -1.83
LIG3-211ENST00000588713 SMDT1Q9H4I9 107 aa3.61□□□□□ -1.83
LIG3-211ENST00000588713 RGCCQ9H4X1 137 aa3.61□□□□□ -1.83
LIG3-211ENST00000588713 TMEM231Q9H6L2 316 aa3.61□□□□□ -1.83
LIG3-211ENST00000588713 BCO1Q9HAY6 547 aa3.61□□□□□ -1.83
LIG3-211ENST00000588713 LYRM4Q9HD34 91 aa3.61□□□□□ -1.83
LIG3-211ENST00000588713 ADAP2Q9NPF8 381 aa3.61□□□□□ -1.83
LIG3-211ENST00000588713 RPS10P5Q9NQ39 176 aa3.61□□□□□ -1.83
LIG3-211ENST00000588713 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.61□□□□□ -1.83
LIG3-211ENST00000588713 PARPBPQ9NWS1 579 aa3.61□□□□□ -1.83
LIG3-211ENST00000588713 FBLN5Q9UBX5 448 aa3.61□□□□□ -1.83
LIG3-211ENST00000588713 SLC23A2Q9UGH3 650 aa3.61□□□□□ -1.83
LIG3-211ENST00000588713 LAMP5Q9UJQ1 280 aa3.61□□□□□ -1.83
LIG3-211ENST00000588713 NXT1Q9UKK6 140 aaKnown RBP3.61□□□□□ -1.83
LIG3-211ENST00000588713 DHDHQ9UQ10 334 aa3.61□□□□□ -1.83
LIG3-211ENST00000588713 LAMP3Q9UQV4 416 aa3.61□□□□□ -1.83
LIG3-211ENST00000588713 KLHDC2Q9Y2U9 406 aa3.61□□□□□ -1.83
LIG3-211ENST00000588713 HDGFL3Q9Y3E1 203 aa3.61□□□□□ -1.83
LIG3-211ENST00000588713 STRAPQ9Y3F4 350 aaKnown RBP3.61□□□□□ -1.83
LIG3-211ENST00000588713 TMED3Q9Y3Q3 217 aa3.61□□□□□ -1.83
LIG3-211ENST00000588713 ADAM18Q9Y3Q7 739 aa3.61□□□□□ -1.83
LIG3-211ENST00000588713 IER3IP1Q9Y5U9 82 aa3.61□□□□□ -1.83
LIG3-211ENST00000588713 FLVCR1Q9Y5Y0 555 aa3.61□□□□□ -1.83
LIG3-211ENST00000588713 SPACA6W5XKT8 324 aa3.61□□□□□ -1.83
LIG3-211ENST00000588713 PHF3Q92576 2039 aaKnown RBP3.61□□□□□ -1.83
LIG3-211ENST00000588713 A0A087WUJ7 227 aa3.6□□□□□ -1.83
LIG3-211ENST00000588713 A0A087WWC5 75 aa3.6□□□□□ -1.83
LIG3-211ENST00000588713 A0A1W2PPE3 182 aa3.6□□□□□ -1.83
LIG3-211ENST00000588713 TMEM72A0PK05 275 aa3.6□□□□□ -1.83
LIG3-211ENST00000588713 C7orf77A4D0Y5 90 aa3.6□□□□□ -1.83
LIG3-211ENST00000588713 MEIS3P1A6NDR6 274 aa3.6□□□□□ -1.83
LIG3-211ENST00000588713 C5orf51A6NDU8 294 aa3.6□□□□□ -1.83
LIG3-211ENST00000588713 OR2W5A6NFC9 320 aa3.6□□□□□ -1.83
LIG3-211ENST00000588713 URADA6NGE7 173 aa3.6□□□□□ -1.83
LIG3-211ENST00000588713 SEC14L6B5MCN3 397 aa3.6□□□□□ -1.83
LIG3-211ENST00000588713 ZNF587BE7ETH6 402 aa3.6□□□□□ -1.83
LIG3-211ENST00000588713 RAB27BO00194 218 aa3.6□□□□□ -1.83
LIG3-211ENST00000588713 HCRTR1O43613 425 aa3.6□□□□□ -1.83
LIG3-211ENST00000588713 NME2P1O60361 137 aa3.6□□□□□ -1.83
LIG3-211ENST00000588713 NEURL1O76050 574 aa3.6□□□□□ -1.83
LIG3-211ENST00000588713 JTBO76095 146 aa3.6□□□□□ -1.83
LIG3-211ENST00000588713 RPP14O95059 124 aaKnown RBP3.6□□□□□ -1.83
LIG3-211ENST00000588713 SFT2D2O95562 160 aa3.6□□□□□ -1.83
LIG3-211ENST00000588713 BPNT1O95861 308 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms