RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 SMPD3Q9NY59 655 aaPredicted RBP11.83□□□□□ -0.52
DDX39A-208ENST00000588692 AASSQ9UDR5 926 aa11.83□□□□□ -0.52
DDX39A-208ENST00000588692 SF3B6Q9Y3B4 125 aaKnown RBP11.83□□□□□ -0.52
DDX39A-208ENST00000588692 RPL36Q9Y3U8 105 aaKnown RBP11.83□□□□□ -0.52
DDX39A-208ENST00000588692 MEIOCA2RUB1 952 aa11.82□□□□□ -0.52
DDX39A-208ENST00000588692 OR4C45A6NMZ5 311 aa11.82□□□□□ -0.52
DDX39A-208ENST00000588692 K7N7A8 449 aa11.82□□□□□ -0.52
DDX39A-208ENST00000588692 BAG2O95816 211 aa11.82□□□□□ -0.52
DDX39A-208ENST00000588692 CHRM2P08172 466 aa11.82□□□□□ -0.52
DDX39A-208ENST00000588692 ATF1P18846 271 aa11.82□□□□□ -0.52
DDX39A-208ENST00000588692 MDKP21741 143 aaPredicted RBP11.82□□□□□ -0.52
DDX39A-208ENST00000588692 AZGP1P25311 298 aaKnown RBP11.82□□□□□ -0.52
DDX39A-208ENST00000588692 SAA4P35542 130 aa11.82□□□□□ -0.52
DDX39A-208ENST00000588692 ALKBH1Q13686 389 aaKnown RBP11.82□□□□□ -0.52
DDX39A-208ENST00000588692 MIDNQ504T8 468 aa11.82□□□□□ -0.52
DDX39A-208ENST00000588692 GDPGP1Q6ZNW5 385 aa11.82□□□□□ -0.52
DDX39A-208ENST00000588692 LHFPL2Q6ZUX7 228 aa11.82□□□□□ -0.52
DDX39A-208ENST00000588692 MKXQ8IYA7 352 aa11.82□□□□□ -0.52
DDX39A-208ENST00000588692 BATF2Q8N1L9 274 aa11.82□□□□□ -0.52
DDX39A-208ENST00000588692 ASCC1Q8N9N2 400 aaKnown RBP11.82□□□□□ -0.52
DDX39A-208ENST00000588692 ZNF555Q8NEP9 628 aa11.82□□□□□ -0.52
DDX39A-208ENST00000588692 SLAMF9Q96A28 289 aa11.82□□□□□ -0.52
DDX39A-208ENST00000588692 SEBOXQ9HB31 216 aaPredicted RBP11.82□□□□□ -0.52
DDX39A-208ENST00000588692 MRPS18AQ9NVS2 196 aaKnown RBP11.82□□□□□ -0.52
DDX39A-208ENST00000588692 ERVK13-1Q9NX77 482 aa11.82□□□□□ -0.52
DDX39A-208ENST00000588692 C1RLQ9NZP8 487 aa11.82□□□□□ -0.52
DDX39A-208ENST00000588692 MYRFQ9Y2G1 1151 aa11.82□□□□□ -0.52
DDX39A-208ENST00000588692 IGKV1-9A0A0C4DH69 117 aa11.81□□□□□ -0.52
DDX39A-208ENST00000588692 GPR137BO60478 399 aa11.81□□□□□ -0.52
DDX39A-208ENST00000588692 OCM2P0CE71 109 aa11.81□□□□□ -0.52
DDX39A-208ENST00000588692 OCMP0CE72 109 aaPredicted RBP11.81□□□□□ -0.52
DDX39A-208ENST00000588692 DLX1P56177 255 aa11.81□□□□□ -0.52
DDX39A-208ENST00000588692 MTCP1P56278 107 aa11.81□□□□□ -0.52
DDX39A-208ENST00000588692 COL10A1Q03692 680 aa11.81□□□□□ -0.52
DDX39A-208ENST00000588692 KLHL22Q53GT1 634 aa11.81□□□□□ -0.52
DDX39A-208ENST00000588692 LPCAT4Q643R3 524 aa11.81□□□□□ -0.52
DDX39A-208ENST00000588692 TMEM200BQ69YZ2 307 aa11.81□□□□□ -0.52
DDX39A-208ENST00000588692 LHFPL3Q86UP9 236 aa11.81□□□□□ -0.52
DDX39A-208ENST00000588692 ZNF676Q8N7Q3 588 aa11.81□□□□□ -0.52
DDX39A-208ENST00000588692 OR13C3Q8NGS6 347 aa11.81□□□□□ -0.52
DDX39A-208ENST00000588692 OR5R1Q8NH85 324 aa11.81□□□□□ -0.52
DDX39A-208ENST00000588692 EMG1Q92979 244 aaKnown RBP11.81□□□□□ -0.52
DDX39A-208ENST00000588692 FGGYQ96C11 551 aa11.81□□□□□ -0.52
DDX39A-208ENST00000588692 OPALINQ96PE5 141 aa11.81□□□□□ -0.52
DDX39A-208ENST00000588692 HEXA-AS1Q9H8Q6 139 aa11.81□□□□□ -0.52
DDX39A-208ENST00000588692 NEK6Q9HC98 313 aa11.81□□□□□ -0.52
DDX39A-208ENST00000588692 C8orf4Q9NR00 106 aa11.81□□□□□ -0.52
DDX39A-208ENST00000588692 VPREB3Q9UKI3 123 aa11.81□□□□□ -0.52
DDX39A-208ENST00000588692 DSCAML1Q8TD84 2053 aa11.8□□□□□ -0.52
DDX39A-208ENST00000588692 TRBV2A0A0J9YWF9 115 aa11.8□□□□□ -0.52
DDX39A-208ENST00000588692 A0A1W2PRD5 423 aa11.8□□□□□ -0.52
DDX39A-208ENST00000588692 A0A1W2PRF3 423 aa11.8□□□□□ -0.52
DDX39A-208ENST00000588692 A0A1W2PRM7 423 aa11.8□□□□□ -0.52
DDX39A-208ENST00000588692 TMEM212A6NML5 194 aa11.8□□□□□ -0.52
DDX39A-208ENST00000588692 F8VVB4 439 aa11.8□□□□□ -0.52
DDX39A-208ENST00000588692 F8VWA3 439 aa11.8□□□□□ -0.52
DDX39A-208ENST00000588692 ANGPTL7O43827 346 aa11.8□□□□□ -0.52
DDX39A-208ENST00000588692 ZNF737O75373 536 aa11.8□□□□□ -0.52
DDX39A-208ENST00000588692 MT-ND2P03891 347 aa11.8□□□□□ -0.52
DDX39A-208ENST00000588692 CCDC159P0C7I6 412 aa11.8□□□□□ -0.52
DDX39A-208ENST00000588692 OMGP23515 440 aa11.8□□□□□ -0.52
DDX39A-208ENST00000588692 RELBQ01201 579 aa11.8□□□□□ -0.52
DDX39A-208ENST00000588692 PRB3Q04118 309 aaPredicted RBP11.8□□□□□ -0.52
DDX39A-208ENST00000588692 SPIN3Q5JUX0 258 aa11.8□□□□□ -0.52
DDX39A-208ENST00000588692 HCP5Q6MZN7 132 aa11.8□□□□□ -0.52
DDX39A-208ENST00000588692 OR8H2Q8N162 312 aa11.8□□□□□ -0.52
DDX39A-208ENST00000588692 OR4M1Q8NGD0 313 aa11.8□□□□□ -0.52
DDX39A-208ENST00000588692 OR51A4Q8NGJ6 313 aa11.8□□□□□ -0.52
DDX39A-208ENST00000588692 OR52I1Q8NGK6 324 aa11.8□□□□□ -0.52
DDX39A-208ENST00000588692 APH1BQ8WW43 257 aa11.8□□□□□ -0.52
DDX39A-208ENST00000588692 TAF15Q92804 592 aaKnown RBP eCLIP11.8□□□□□ -0.52
DDX39A-208ENST00000588692 JAM3Q9BX67 310 aa11.8□□□□□ -0.52
DDX39A-208ENST00000588692 COMMD4Q9H0A8 199 aa11.8□□□□□ -0.52
DDX39A-208ENST00000588692 AMBNQ9NP70 447 aa11.8□□□□□ -0.52
DDX39A-208ENST00000588692 RBP4P02753 201 aa11.79□□□□□ -0.52
DDX39A-208ENST00000588692 POU3F4P49335 361 aa11.79□□□□□ -0.52
DDX39A-208ENST00000588692 GBX2P52951 348 aaPredicted RBP11.79□□□□□ -0.52
DDX39A-208ENST00000588692 ERVFRD-1P60508 538 aa11.79□□□□□ -0.52
DDX39A-208ENST00000588692 TAF9Q16594 264 aa11.79□□□□□ -0.52
DDX39A-208ENST00000588692 PRR31Q5SQ13 230 aa11.79□□□□□ -0.52
DDX39A-208ENST00000588692 GDPD3Q7L5L3 318 aa11.79□□□□□ -0.52
DDX39A-208ENST00000588692 FAM58AQ8N1B3 248 aa11.79□□□□□ -0.52
DDX39A-208ENST00000588692 PNKDQ8N490 385 aa11.79□□□□□ -0.52
DDX39A-208ENST00000588692 C11orf42Q8N5U0 333 aa11.79□□□□□ -0.52
DDX39A-208ENST00000588692 BEND2Q8NDZ0 799 aa11.79□□□□□ -0.52
DDX39A-208ENST00000588692 OR10AC1Q8NH08 325 aa11.79□□□□□ -0.52
DDX39A-208ENST00000588692 SNX22Q96L94 193 aa11.79□□□□□ -0.52
DDX39A-208ENST00000588692 ZNF649Q9BS31 505 aa11.79□□□□□ -0.52
DDX39A-208ENST00000588692 ZNF696Q9H7X3 374 aa11.79□□□□□ -0.52
DDX39A-208ENST00000588692 ISG20L2Q9H9L3 353 aaKnown RBP11.79□□□□□ -0.52
DDX39A-208ENST00000588692 RHOFQ9HBH0 211 aa11.79□□□□□ -0.52
DDX39A-208ENST00000588692 CLPSL1A2RUU4 121 aa11.78□□□□□ -0.52
DDX39A-208ENST00000588692 SPRY1O43609 319 aaPredicted RBP11.78□□□□□ -0.52
DDX39A-208ENST00000588692 INMTO95050 263 aa11.78□□□□□ -0.52
DDX39A-208ENST00000588692 ZFPL1O95159 310 aa11.78□□□□□ -0.52
DDX39A-208ENST00000588692 HAND1O96004 215 aa11.78□□□□□ -0.52
DDX39A-208ENST00000588692 CCL3L1P16619 93 aa11.78□□□□□ -0.52
DDX39A-208ENST00000588692 MEF2CQ06413 473 aaPredicted RBP11.78□□□□□ -0.52
DDX39A-208ENST00000588692 PDZK1IP1Q13113 114 aa11.78□□□□□ -0.52
DDX39A-208ENST00000588692 ZNF273Q14593 569 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms