RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 MAP2K3P46734 347 aa9.38□□□□□ -0.91
LIG3-207ENST00000586119 DLX6P56179 175 aa9.38□□□□□ -0.91
LIG3-207ENST00000586119 LOXL3P58215 753 aa9.38□□□□□ -0.91
LIG3-207ENST00000586119 PSMA6P60900 246 aaKnown RBP9.38□□□□□ -0.91
LIG3-207ENST00000586119 ISL1P61371 349 aa9.38□□□□□ -0.91
LIG3-207ENST00000586119 BLCAPP62952 87 aa9.38□□□□□ -0.91
LIG3-207ENST00000586119 TMEM95Q3KNT9 176 aa9.38□□□□□ -0.91
LIG3-207ENST00000586119 KRT74Q7RTS7 529 aa9.38□□□□□ -0.91
LIG3-207ENST00000586119 KRT77Q7Z794 578 aa9.38□□□□□ -0.91
LIG3-207ENST00000586119 FTMTQ8N4E7 242 aa9.38□□□□□ -0.91
LIG3-207ENST00000586119 OR5A2Q8NGI9 324 aa9.38□□□□□ -0.91
LIG3-207ENST00000586119 OR51E1Q8TCB6 317 aa9.38□□□□□ -0.91
LIG3-207ENST00000586119 WIPF2Q8TF74 440 aaPredicted RBP9.38□□□□□ -0.91
LIG3-207ENST00000586119 SGCDQ92629 289 aa9.38□□□□□ -0.91
LIG3-207ENST00000586119 R3HDM4Q96D70 268 aa9.38□□□□□ -0.91
LIG3-207ENST00000586119 CDCA4Q9BXL8 241 aa9.38□□□□□ -0.91
LIG3-207ENST00000586119 YIPF3Q9GZM5 350 aa9.38□□□□□ -0.91
LIG3-207ENST00000586119 NPFFR1Q9GZQ6 430 aa9.38□□□□□ -0.91
LIG3-207ENST00000586119 Q9H521 79 aa9.38□□□□□ -0.91
LIG3-207ENST00000586119 RANBP3Q9H6Z4 567 aaPredicted RBP9.38□□□□□ -0.91
LIG3-207ENST00000586119 NIPAL2Q9H841 368 aa9.38□□□□□ -0.91
LIG3-207ENST00000586119 GPR84Q9NQS5 396 aa9.38□□□□□ -0.91
LIG3-207ENST00000586119 FAM206AQ9NX38 181 aa9.38□□□□□ -0.91
LIG3-207ENST00000586119 RAB26Q9ULW5 256 aa9.38□□□□□ -0.91
LIG3-207ENST00000586119 COPS3Q9UNS2 423 aa9.38□□□□□ -0.91
LIG3-207ENST00000586119 KIAA2026Q5HYC2 2103 aa9.38□□□□□ -0.91
LIG3-207ENST00000586119 KMT2CQ8NEZ4 4911 aaKnown RBP9.38□□□□□ -0.91
LIG3-207ENST00000586119 TMEM269A0A1B0GVZ9 245 aa9.37□□□□□ -0.91
LIG3-207ENST00000586119 IRGMA1A4Y4 181 aa9.37□□□□□ -0.91
LIG3-207ENST00000586119 A6NDX4 124 aa9.37□□□□□ -0.91
LIG3-207ENST00000586119 M0R129 80 aa9.37□□□□□ -0.91
LIG3-207ENST00000586119 IGLV3-1P01715 115 aa9.37□□□□□ -0.91
LIG3-207ENST00000586119 MRPL3P09001 348 aaKnown RBP9.37□□□□□ -0.91
LIG3-207ENST00000586119 IGLL1P15814 213 aa9.37□□□□□ -0.91
LIG3-207ENST00000586119 LGALS4P56470 323 aa9.37□□□□□ -0.91
LIG3-207ENST00000586119 MFGE8Q08431 387 aaPredicted RBP9.37□□□□□ -0.91
LIG3-207ENST00000586119 AANATQ16613 207 aa9.37□□□□□ -0.91
LIG3-207ENST00000586119 FOXB2Q5VYV0 432 aa9.37□□□□□ -0.91
LIG3-207ENST00000586119 PLCXD3Q63HM9 321 aa9.37□□□□□ -0.91
LIG3-207ENST00000586119 POC1AQ8NBT0 407 aa9.37□□□□□ -0.91
LIG3-207ENST00000586119 FBLIM1Q8WUP2 373 aa9.37□□□□□ -0.91
LIG3-207ENST00000586119 PHF21AQ96BD5 680 aa9.37□□□□□ -0.91
LIG3-207ENST00000586119 MYCBPQ99417 103 aaPredicted RBP9.37□□□□□ -0.91
LIG3-207ENST00000586119 CNN2Q99439 309 aaKnown RBP9.37□□□□□ -0.91
LIG3-207ENST00000586119 ZNF184Q99676 751 aaPredicted RBP9.37□□□□□ -0.91
LIG3-207ENST00000586119 ANKRD60Q9BZ19 345 aa9.37□□□□□ -0.91
LIG3-207ENST00000586119 PBOV1Q9GZY1 135 aa9.37□□□□□ -0.91
LIG3-207ENST00000586119 HEXA-AS1Q9H8Q6 139 aa9.37□□□□□ -0.91
LIG3-207ENST00000586119 ABCB9Q9NP78 766 aa9.37□□□□□ -0.91
LIG3-207ENST00000586119 GPR173Q9NS66 373 aa9.37□□□□□ -0.91
LIG3-207ENST00000586119 OR14J1Q9UGF5 321 aa9.37□□□□□ -0.91
LIG3-207ENST00000586119 TCF19Q9Y242 345 aa9.37□□□□□ -0.91
LIG3-207ENST00000586119 PIGLQ9Y2B2 252 aa9.37□□□□□ -0.91
LIG3-207ENST00000586119 RPL36Q9Y3U8 105 aaKnown RBP9.37□□□□□ -0.91
LIG3-207ENST00000586119 TMEM14AQ9Y6G1 99 aa9.37□□□□□ -0.91
LIG3-207ENST00000586119 A0A1W2PRX2 142 aa9.36□□□□□ -0.91
LIG3-207ENST00000586119 F8VVB4 439 aa9.36□□□□□ -0.91
LIG3-207ENST00000586119 F8VWA3 439 aa9.36□□□□□ -0.91
LIG3-207ENST00000586119 ENTPD6O75354 484 aa9.36□□□□□ -0.91
LIG3-207ENST00000586119 INMTO95050 263 aa9.36□□□□□ -0.91
LIG3-207ENST00000586119 ARG1P05089 322 aa9.36□□□□□ -0.91
LIG3-207ENST00000586119 PGA5P0DJD9 388 aa9.36□□□□□ -0.91
LIG3-207ENST00000586119 MYF6P23409 242 aa9.36□□□□□ -0.91
LIG3-207ENST00000586119 HAAOP46952 286 aa9.36□□□□□ -0.91
LIG3-207ENST00000586119 RIPPLY1Q0D2K3 151 aa9.36□□□□□ -0.91
LIG3-207ENST00000586119 SSX2Q16385 188 aa9.36□□□□□ -0.91
LIG3-207ENST00000586119 C11orf88Q6PI97 169 aa9.36□□□□□ -0.91
LIG3-207ENST00000586119 PLEKHG7Q6ZR37 379 aa9.36□□□□□ -0.91
LIG3-207ENST00000586119 BCDIN3DQ7Z5W3 292 aaKnown RBP9.36□□□□□ -0.91
LIG3-207ENST00000586119 COMMD2Q86X83 199 aa9.36□□□□□ -0.91
LIG3-207ENST00000586119 ANGPTL5Q86XS5 388 aa9.36□□□□□ -0.91
LIG3-207ENST00000586119 Q8N2B8 174 aa9.36□□□□□ -0.91
LIG3-207ENST00000586119 APH1BQ8WW43 257 aa9.36□□□□□ -0.91
LIG3-207ENST00000586119 ASB17Q8WXJ9 295 aa9.36□□□□□ -0.91
LIG3-207ENST00000586119 OR8B4Q96RC9 309 aa9.36□□□□□ -0.91
LIG3-207ENST00000586119 WNT10AQ9GZT5 417 aa9.36□□□□□ -0.91
LIG3-207ENST00000586119 RAB18Q9NP72 206 aa9.36□□□□□ -0.91
LIG3-207ENST00000586119 MRPS18AQ9NVS2 196 aaKnown RBP9.36□□□□□ -0.91
LIG3-207ENST00000586119 NECAP2Q9NVZ3 263 aa9.36□□□□□ -0.91
LIG3-207ENST00000586119 RASL12Q9NYN1 266 aa9.36□□□□□ -0.91
LIG3-207ENST00000586119 LAMP5Q9UJQ1 280 aa9.36□□□□□ -0.91
LIG3-207ENST00000586119 A0A0U1RQV5 110 aa9.35□□□□□ -0.91
LIG3-207ENST00000586119 C17orf98A8MV24 154 aa9.35□□□□□ -0.91
LIG3-207ENST00000586119 H3BSH0 61 aa9.35□□□□□ -0.91
LIG3-207ENST00000586119 WBP4O75554 376 aaKnown RBP9.35□□□□□ -0.91
LIG3-207ENST00000586119 CLIC3O95833 236 aa9.35□□□□□ -0.91
LIG3-207ENST00000586119 MPIG6BO95866 241 aa9.35□□□□□ -0.91
LIG3-207ENST00000586119 NRASP01111 189 aa9.35□□□□□ -0.91
LIG3-207ENST00000586119 TTRP02766 147 aa9.35□□□□□ -0.91
LIG3-207ENST00000586119 TK1P04183 234 aa9.35□□□□□ -0.91
LIG3-207ENST00000586119 OR2T7P0C7T2 308 aa9.35□□□□□ -0.91
LIG3-207ENST00000586119 ATP6V1E1P36543 226 aa9.35□□□□□ -0.91
LIG3-207ENST00000586119 CXCR4P61073 352 aa9.35□□□□□ -0.91
LIG3-207ENST00000586119 ACTC1P68032 377 aa9.35□□□□□ -0.91
LIG3-207ENST00000586119 ACTA1P68133 377 aa9.35□□□□□ -0.91
LIG3-207ENST00000586119 EMX1Q04741 257 aaPredicted RBP9.35□□□□□ -0.91
LIG3-207ENST00000586119 CNN3Q15417 329 aaKnown RBP9.35□□□□□ -0.91
LIG3-207ENST00000586119 KLHL22Q53GT1 634 aa9.35□□□□□ -0.91
LIG3-207ENST00000586119 KCTD18Q6PI47 426 aaPredicted RBP9.35□□□□□ -0.91
LIG3-207ENST00000586119 NBEAL2Q6ZNJ1 2754 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms