RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 EFSO43281 561 aa9.7□□□□□ -0.86
LIG3-204ENST00000585740 PDCD6O75340 191 aa9.7□□□□□ -0.86
LIG3-204ENST00000585740 PLATP00750 562 aa9.7□□□□□ -0.86
LIG3-204ENST00000585740 ZNF35P13682 527 aa9.7□□□□□ -0.86
LIG3-204ENST00000585740 SELEP16581 610 aa9.7□□□□□ -0.86
LIG3-204ENST00000585740 IGHV1-2P23083 117 aa9.7□□□□□ -0.86
LIG3-204ENST00000585740 TUBG1P23258 451 aa9.7□□□□□ -0.86
LIG3-204ENST00000585740 HOXC12P31275 282 aa9.7□□□□□ -0.86
LIG3-204ENST00000585740 RBM11P57052 281 aaKnown RBP9.7□□□□□ -0.86
LIG3-204ENST00000585740 ARPC4P59998 168 aa9.7□□□□□ -0.86
LIG3-204ENST00000585740 IL13RA1P78552 427 aa9.7□□□□□ -0.86
LIG3-204ENST00000585740 TAF9Q16594 264 aa9.7□□□□□ -0.86
LIG3-204ENST00000585740 LGALSLQ3ZCW2 172 aaPredicted RBP9.7□□□□□ -0.86
LIG3-204ENST00000585740 ACSF3Q4G176 576 aaPredicted RBP9.7□□□□□ -0.86
LIG3-204ENST00000585740 DMRTC1Q5HYR2 192 aa9.7□□□□□ -0.86
LIG3-204ENST00000585740 UNQ6126/PRO20091Q6UXV3 157 aa9.7□□□□□ -0.86
LIG3-204ENST00000585740 C6orf201Q7Z4U5 140 aa9.7□□□□□ -0.86
LIG3-204ENST00000585740 LINC00596Q86U02 117 aa9.7□□□□□ -0.86
LIG3-204ENST00000585740 RTN4RL2Q86UN3 420 aa9.7□□□□□ -0.86
LIG3-204ENST00000585740 FBXL14Q8N1E6 418 aa9.7□□□□□ -0.86
LIG3-204ENST00000585740 ZNF611Q8N823 705 aa9.7□□□□□ -0.86
LIG3-204ENST00000585740 OR5M8Q8NGP6 311 aa9.7□□□□□ -0.86
LIG3-204ENST00000585740 WBP1Q96G27 269 aa9.7□□□□□ -0.86
LIG3-204ENST00000585740 ZNF75AQ96N20 296 aa9.7□□□□□ -0.86
LIG3-204ENST00000585740 DHRS9Q9BPW9 319 aa9.7□□□□□ -0.86
LIG3-204ENST00000585740 ST6GALNAC5Q9BVH7 336 aa9.7□□□□□ -0.86
LIG3-204ENST00000585740 PLK3Q9H4B4 646 aa9.7□□□□□ -0.86
LIG3-204ENST00000585740 RHOFQ9HBH0 211 aa9.7□□□□□ -0.86
LIG3-204ENST00000585740 OBP2BQ9NPH6 170 aa9.7□□□□□ -0.86
LIG3-204ENST00000585740 TUBG2Q9NRH3 451 aa9.7□□□□□ -0.86
LIG3-204ENST00000585740 EHFQ9NZC4 300 aa9.7□□□□□ -0.86
LIG3-204ENST00000585740 OSGIN2Q9Y236 505 aa9.7□□□□□ -0.86
LIG3-204ENST00000585740 ST3GAL6Q9Y274 331 aa9.7□□□□□ -0.86
LIG3-204ENST00000585740 CFAP46Q8IYW2 2715 aa9.7□□□□□ -0.86
LIG3-204ENST00000585740 IGKV1-12A0A0C4DH73 117 aa9.69□□□□□ -0.86
LIG3-204ENST00000585740 PLSCR5A0PG75 271 aa9.69□□□□□ -0.86
LIG3-204ENST00000585740 ZNF732B4DXR9 585 aa9.69□□□□□ -0.86
LIG3-204ENST00000585740 TRAPPC2LH3BP13 241 aa9.69□□□□□ -0.86
LIG3-204ENST00000585740 L7N2F9 121 aa9.69□□□□□ -0.86
LIG3-204ENST00000585740 M0R233 179 aa9.69□□□□□ -0.86
LIG3-204ENST00000585740 DUS4LO95620 317 aaKnown RBP9.69□□□□□ -0.86
LIG3-204ENST00000585740 IFNA7P01567 189 aa9.69□□□□□ -0.86
LIG3-204ENST00000585740 IGKV1D-12P01611 117 aa9.69□□□□□ -0.86
LIG3-204ENST00000585740 CD8AP01732 235 aa9.69□□□□□ -0.86
LIG3-204ENST00000585740 CRYABP02511 175 aaKnown RBP9.69□□□□□ -0.86
LIG3-204ENST00000585740 CRHP06850 196 aa9.69□□□□□ -0.86
LIG3-204ENST00000585740 CCL2P13500 99 aa9.69□□□□□ -0.86
LIG3-204ENST00000585740 ZNF14P17017 642 aaPredicted RBP9.69□□□□□ -0.86
LIG3-204ENST00000585740 COX5AP20674 150 aa9.69□□□□□ -0.86
LIG3-204ENST00000585740 FUT3P21217 361 aa9.69□□□□□ -0.86
LIG3-204ENST00000585740 NFYAP23511 347 aaPredicted RBP9.69□□□□□ -0.86
LIG3-204ENST00000585740 PTGER4P35408 488 aa9.69□□□□□ -0.86
LIG3-204ENST00000585740 WNT5AP41221 380 aa9.69□□□□□ -0.86
LIG3-204ENST00000585740 ZNF81P51508 661 aa9.69□□□□□ -0.86
LIG3-204ENST00000585740 PER3P56645 1201 aa9.69□□□□□ -0.86
LIG3-204ENST00000585740 FGF12P61328 243 aa9.69□□□□□ -0.86
LIG3-204ENST00000585740 GNG3P63215 75 aa9.69□□□□□ -0.86
LIG3-204ENST00000585740 PPP1R1AQ13522 171 aa9.69□□□□□ -0.86
LIG3-204ENST00000585740 GABRA6Q16445 453 aa9.69□□□□□ -0.86
LIG3-204ENST00000585740 MPV17LQ2QL34 196 aa9.69□□□□□ -0.86
LIG3-204ENST00000585740 TMEM128Q5BJH2 165 aa9.69□□□□□ -0.86
LIG3-204ENST00000585740 SIGIRRQ6IA17 410 aa9.69□□□□□ -0.86
LIG3-204ENST00000585740 TMEM211Q6ICI0 200 aa9.69□□□□□ -0.86
LIG3-204ENST00000585740 FBXW12Q6X9E4 464 aa9.69□□□□□ -0.86
LIG3-204ENST00000585740 Q6ZS92 163 aa9.69□□□□□ -0.86
LIG3-204ENST00000585740 SLC25A26Q70HW3 274 aa9.69□□□□□ -0.86
LIG3-204ENST00000585740 OVCH2Q7RTZ1 564 aa9.69□□□□□ -0.86
LIG3-204ENST00000585740 PEG10Q86TG7 708 aaKnown RBP9.69□□□□□ -0.86
LIG3-204ENST00000585740 ZNF573Q86YE8 665 aa9.69□□□□□ -0.86
LIG3-204ENST00000585740 C17orf78Q8N4C9 275 aa9.69□□□□□ -0.86
LIG3-204ENST00000585740 OR8H1Q8NGG4 311 aa9.69□□□□□ -0.86
LIG3-204ENST00000585740 LILRB4Q8NHJ6 448 aa9.69□□□□□ -0.86
LIG3-204ENST00000585740 SNIP1Q8TAD8 396 aaKnown RBP9.69□□□□□ -0.86
LIG3-204ENST00000585740 MARCH1Q8TCQ1 289 aa9.69□□□□□ -0.86
LIG3-204ENST00000585740 MRGPRFQ96AM1 343 aa9.69□□□□□ -0.86
LIG3-204ENST00000585740 PKIBQ9C010 78 aa9.69□□□□□ -0.86
LIG3-204ENST00000585740 PRORYQ9H606 182 aa9.69□□□□□ -0.86
LIG3-204ENST00000585740 ZNF286AQ9HBT8 521 aa9.69□□□□□ -0.86
LIG3-204ENST00000585740 ZNF701Q9NV72 531 aaPredicted RBP9.69□□□□□ -0.86
LIG3-204ENST00000585740 NECAP2Q9NVZ3 263 aa9.69□□□□□ -0.86
LIG3-204ENST00000585740 COMMD9Q9P000 198 aa9.69□□□□□ -0.86
LIG3-204ENST00000585740 AK3Q9UIJ7 227 aa9.69□□□□□ -0.86
LIG3-204ENST00000585740 ANXA10Q9UJ72 324 aa9.69□□□□□ -0.86
LIG3-204ENST00000585740 C14orf166Q9Y224 244 aaKnown RBP9.69□□□□□ -0.86
LIG3-204ENST00000585740 RFPL4AA6NLU0 287 aa9.68□□□□□ -0.86
LIG3-204ENST00000585740 RFPL4AL1F8VTS6 287 aa9.68□□□□□ -0.86
LIG3-204ENST00000585740 GEMIN2O14893 280 aaKnown RBP9.68□□□□□ -0.86
LIG3-204ENST00000585740 KLK10O43240 276 aa9.68□□□□□ -0.86
LIG3-204ENST00000585740 TSC22D2O75157 780 aa9.68□□□□□ -0.86
LIG3-204ENST00000585740 TOXO94900 526 aa9.68□□□□□ -0.86
LIG3-204ENST00000585740 SIX6O95475 246 aa9.68□□□□□ -0.86
LIG3-204ENST00000585740 SFT2D2O95562 160 aa9.68□□□□□ -0.86
LIG3-204ENST00000585740 NGFP01138 241 aa9.68□□□□□ -0.86
LIG3-204ENST00000585740 CBR1P16152 277 aa9.68□□□□□ -0.86
LIG3-204ENST00000585740 PPP3CBP16298 524 aa9.68□□□□□ -0.86
LIG3-204ENST00000585740 KIR2DL2P43627 348 aaPredicted RBP9.68□□□□□ -0.86
LIG3-204ENST00000585740 H2BFSP57053 126 aa9.68□□□□□ -0.86
LIG3-204ENST00000585740 SEC61A1P61619 476 aaKnown RBP9.68□□□□□ -0.86
LIG3-204ENST00000585740 HLXQ14774 488 aaPredicted RBP9.68□□□□□ -0.86
LIG3-204ENST00000585740 SRSF7Q16629 238 aaKnown RBP eCLIP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms