RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 RNF7Q9UBF6 113 aa13.6□□□□□ -0.23
SS18-226ENST00000585241 PPP1R3CQ9UQK1 317 aa13.6□□□□□ -0.23
SS18-226ENST00000585241 A0A0A6YYD4 124 aa13.59□□□□□ -0.23
SS18-226ENST00000585241 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.59□□□□□ -0.23
SS18-226ENST00000585241 RAB27BO00194 218 aa13.59□□□□□ -0.23
SS18-226ENST00000585241 HPXP02790 462 aa13.59□□□□□ -0.23
SS18-226ENST00000585241 CHRM2P08172 466 aa13.59□□□□□ -0.23
SS18-226ENST00000585241 CPT2P23786 658 aa13.59□□□□□ -0.23
SS18-226ENST00000585241 RBM11P57052 281 aaKnown RBP13.59□□□□□ -0.23
SS18-226ENST00000585241 IL13RA2Q14627 380 aa13.59□□□□□ -0.23
SS18-226ENST00000585241 CNIH2Q6PI25 160 aa13.59□□□□□ -0.23
SS18-226ENST00000585241 METAP1DQ6UB28 335 aaPredicted RBP13.59□□□□□ -0.23
SS18-226ENST00000585241 LINC00596Q86U02 117 aa13.59□□□□□ -0.23
SS18-226ENST00000585241 FAM90A1Q86YD7 464 aa13.59□□□□□ -0.23
SS18-226ENST00000585241 FAM58AQ8N1B3 248 aa13.59□□□□□ -0.23
SS18-226ENST00000585241 MFSD4AQ8N468 514 aa13.59□□□□□ -0.23
SS18-226ENST00000585241 OR4M1Q8NGD0 313 aa13.59□□□□□ -0.23
SS18-226ENST00000585241 OR11L1Q8NGX0 322 aa13.59□□□□□ -0.23
SS18-226ENST00000585241 DIRAS2Q96HU8 199 aa13.59□□□□□ -0.23
SS18-226ENST00000585241 VRK1Q99986 396 aaPredicted RBP13.59□□□□□ -0.23
SS18-226ENST00000585241 SEBOXQ9HB31 216 aaPredicted RBP13.59□□□□□ -0.23
SS18-226ENST00000585241 PLEKHA6Q9Y2H5 1048 aa13.59□□□□□ -0.23
SS18-226ENST00000585241 V9GYH0 126 aa13.59□□□□□ -0.23
SS18-226ENST00000585241 IGHV1-69-2A0A0G2JMI3 117 aa13.58□□□□□ -0.24
SS18-226ENST00000585241 hCG_1807616A0A1W2PRN6 198 aa13.58□□□□□ -0.24
SS18-226ENST00000585241 METTL21EPA6NDL7 271 aa13.58□□□□□ -0.24
SS18-226ENST00000585241 FAM25AB3EWG3 89 aa13.58□□□□□ -0.24
SS18-226ENST00000585241 FAM25CB3EWG5 89 aa13.58□□□□□ -0.24
SS18-226ENST00000585241 FAM25GB3EWG6 89 aa13.58□□□□□ -0.24
SS18-226ENST00000585241 TPD52L2O43399 206 aaKnown RBP13.58□□□□□ -0.24
SS18-226ENST00000585241 EGR1P18146 543 aa13.58□□□□□ -0.24
SS18-226ENST00000585241 PTBP1P26599 531 aaKnown RBP eCLIP13.58□□□□□ -0.24
SS18-226ENST00000585241 RAB12Q6IQ22 244 aa13.58□□□□□ -0.24
SS18-226ENST00000585241 ACP7Q6ZNF0 438 aa13.58□□□□□ -0.24
SS18-226ENST00000585241 S100ZQ8WXG8 99 aa13.58□□□□□ -0.24
SS18-226ENST00000585241 EMG1Q92979 244 aaKnown RBP13.58□□□□□ -0.24
SS18-226ENST00000585241 S100A16Q96FQ6 103 aaKnown RBP13.58□□□□□ -0.24
SS18-226ENST00000585241 TSC22D3Q99576 134 aa13.58□□□□□ -0.24
SS18-226ENST00000585241 NICN1Q9BSH3 213 aa13.58□□□□□ -0.24
SS18-226ENST00000585241 SELENOIQ9C0D9 397 aa13.58□□□□□ -0.24
SS18-226ENST00000585241 TMEM106BQ9NUM4 274 aa13.58□□□□□ -0.24
SS18-226ENST00000585241 RABL2AQ9UBK7 228 aaPredicted RBP13.58□□□□□ -0.24
SS18-226ENST00000585241 EXTL2Q9UBQ6 330 aa13.58□□□□□ -0.24
SS18-226ENST00000585241 RABL2BQ9UNT1 228 aa13.58□□□□□ -0.24
SS18-226ENST00000585241 ST3GAL6Q9Y274 331 aa13.58□□□□□ -0.24
SS18-226ENST00000585241 NPTNQ9Y639 398 aa13.58□□□□□ -0.24
SS18-226ENST00000585241 DYSFO75923 2080 aa13.58□□□□□ -0.24
SS18-226ENST00000585241 AKAP6Q13023 2319 aa13.57□□□□□ -0.24
SS18-226ENST00000585241 LRRC30A6NM36 301 aa13.57□□□□□ -0.24
SS18-226ENST00000585241 XRCC3O43542 346 aa13.57□□□□□ -0.24
SS18-226ENST00000585241 NXPH2O95156 264 aa13.57□□□□□ -0.24
SS18-226ENST00000585241 KNG1P01042 644 aa13.57□□□□□ -0.24
SS18-226ENST00000585241 PRKACAP17612 351 aa13.57□□□□□ -0.24
SS18-226ENST00000585241 GLRA1P23415 457 aa13.57□□□□□ -0.24
SS18-226ENST00000585241 CDK2P24941 298 aa13.57□□□□□ -0.24
SS18-226ENST00000585241 TALDO1P37837 337 aa13.57□□□□□ -0.24
SS18-226ENST00000585241 NR4A2P43354 598 aa13.57□□□□□ -0.24
SS18-226ENST00000585241 ZNF45Q02386 682 aa13.57□□□□□ -0.24
SS18-226ENST00000585241 ZNF146Q15072 292 aa13.57□□□□□ -0.24
SS18-226ENST00000585241 MPV17LQ2QL34 196 aa13.57□□□□□ -0.24
SS18-226ENST00000585241 SMIM21Q3B7S5 101 aa13.57□□□□□ -0.24
SS18-226ENST00000585241 PIGYQ3MUY2 71 aa13.57□□□□□ -0.24
SS18-226ENST00000585241 SPIN3Q5JUX0 258 aa13.57□□□□□ -0.24
SS18-226ENST00000585241 BAIAP2L2Q6UXY1 529 aa13.57□□□□□ -0.24
SS18-226ENST00000585241 TGIF2LYQ8IUE0 185 aa13.57□□□□□ -0.24
SS18-226ENST00000585241 OR56B1Q8NGI3 324 aa13.57□□□□□ -0.24
SS18-226ENST00000585241 GAL3ST1Q99999 423 aa13.57□□□□□ -0.24
SS18-226ENST00000585241 ATG5Q9H1Y0 275 aa13.57□□□□□ -0.24
SS18-226ENST00000585241 WDR13Q9H1Z4 485 aa13.57□□□□□ -0.24
SS18-226ENST00000585241 IFT22Q9H7X7 185 aa13.57□□□□□ -0.24
SS18-226ENST00000585241 DIABLOQ9NR28 239 aa13.57□□□□□ -0.24
SS18-226ENST00000585241 PTPN13Q12923 2485 aa13.57□□□□□ -0.24
SS18-226ENST00000585241 GCN1Q92616 2671 aaKnown RBP13.57□□□□□ -0.24
SS18-226ENST00000585241 DCHS2Q6V1P9 2916 aa13.56□□□□□ -0.24
SS18-226ENST00000585241 TMEM178BH3BS89 294 aa13.56□□□□□ -0.24
SS18-226ENST00000585241 GEMIN2O14893 280 aaKnown RBP13.56□□□□□ -0.24
SS18-226ENST00000585241 WNT9BO14905 357 aa13.56□□□□□ -0.24
SS18-226ENST00000585241 RP2O75695 350 aa13.56□□□□□ -0.24
SS18-226ENST00000585241 FSTL3O95633 263 aa13.56□□□□□ -0.24
SS18-226ENST00000585241 IRF2P14316 349 aa13.56□□□□□ -0.24
SS18-226ENST00000585241 CDKN1AP38936 164 aa13.56□□□□□ -0.24
SS18-226ENST00000585241 PITPNBP48739 271 aa13.56□□□□□ -0.24
SS18-226ENST00000585241 PTH2RP49190 550 aa13.56□□□□□ -0.24
SS18-226ENST00000585241 TMEM50BP56557 158 aa13.56□□□□□ -0.24
SS18-226ENST00000585241 TAF9Q16594 264 aa13.56□□□□□ -0.24
SS18-226ENST00000585241 MOGAT2Q3SYC2 334 aa13.56□□□□□ -0.24
SS18-226ENST00000585241 SPANXN2Q5MJ10 180 aa13.56□□□□□ -0.24
SS18-226ENST00000585241 TEX36Q5VZQ5 186 aa13.56□□□□□ -0.24
SS18-226ENST00000585241 SIGIRRQ6IA17 410 aa13.56□□□□□ -0.24
SS18-226ENST00000585241 C1orf87Q8N0U7 546 aa13.56□□□□□ -0.24
SS18-226ENST00000585241 BATF2Q8N1L9 274 aa13.56□□□□□ -0.24
SS18-226ENST00000585241 OR10R2Q8NGX6 335 aa13.56□□□□□ -0.24
SS18-226ENST00000585241 RDH5Q92781 318 aa13.56□□□□□ -0.24
SS18-226ENST00000585241 MARVELD3Q96A59 401 aa13.56□□□□□ -0.24
SS18-226ENST00000585241 CCL19Q99731 98 aa13.56□□□□□ -0.24
SS18-226ENST00000585241 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.56□□□□□ -0.24
SS18-226ENST00000585241 DLL4Q9NR61 685 aa13.56□□□□□ -0.24
SS18-226ENST00000585241 DCAF16Q9NXF7 216 aa13.56□□□□□ -0.24
SS18-226ENST00000585241 RCC2Q9P258 522 aaKnown RBP13.56□□□□□ -0.24
SS18-226ENST00000585241 IL36RNQ9UBH0 155 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms