RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 RFKQ969G6 155 aa14.5□□□□□ -0.09
TOP3A-220ENST00000585031 MUL1Q969V5 352 aa14.5□□□□□ -0.09
TOP3A-220ENST00000585031 RBM38Q9H0Z9 239 aaKnown RBP14.5□□□□□ -0.09
TOP3A-220ENST00000585031 SP140LQ9H930 580 aa14.5□□□□□ -0.09
TOP3A-220ENST00000585031 DNAJC27Q9NZQ0 273 aa14.5□□□□□ -0.09
TOP3A-220ENST00000585031 DSCAML1Q8TD84 2053 aa14.5□□□□□ -0.09
TOP3A-220ENST00000585031 OR2AT4A6NND4 320 aa14.49□□□□□ -0.09
TOP3A-220ENST00000585031 ZNF701M0R085 212 aaPredicted RBP14.49□□□□□ -0.09
TOP3A-220ENST00000585031 PRKYO43930 277 aa14.49□□□□□ -0.09
TOP3A-220ENST00000585031 PEX14O75381 377 aa14.49□□□□□ -0.09
TOP3A-220ENST00000585031 RHBDL1O75783 438 aa14.49□□□□□ -0.09
TOP3A-220ENST00000585031 RENP00797 406 aa14.49□□□□□ -0.09
TOP3A-220ENST00000585031 PSG2P11465 335 aa14.49□□□□□ -0.09
TOP3A-220ENST00000585031 TBCEQ15813 527 aaPredicted RBP14.49□□□□□ -0.09
TOP3A-220ENST00000585031 TMEM200BQ69YZ2 307 aa14.49□□□□□ -0.09
TOP3A-220ENST00000585031 XAF1Q6GPH4 301 aa14.49□□□□□ -0.09
TOP3A-220ENST00000585031 DCXRQ7Z4W1 244 aa14.49□□□□□ -0.09
TOP3A-220ENST00000585031 OR10Z1Q8NGY1 313 aa14.49□□□□□ -0.09
TOP3A-220ENST00000585031 OR4Q3Q8NH05 313 aa14.49□□□□□ -0.09
TOP3A-220ENST00000585031 IFT27Q9BW83 186 aa14.49□□□□□ -0.09
TOP3A-220ENST00000585031 RSL24D1Q9UHA3 163 aaKnown RBP14.49□□□□□ -0.09
TOP3A-220ENST00000585031 CEPT1Q9Y6K0 416 aa14.49□□□□□ -0.09
TOP3A-220ENST00000585031 LCE6AA0A183 80 aa14.48□□□□□ -0.09
TOP3A-220ENST00000585031 hCG_38984A0A1B0GV85 526 aa14.48□□□□□ -0.09
TOP3A-220ENST00000585031 TCRBV4S1A1TA0A5B7 111 aa14.48□□□□□ -0.09
TOP3A-220ENST00000585031 ARPC3O15145 178 aa14.48□□□□□ -0.09
TOP3A-220ENST00000585031 PRODHO43272 600 aa14.48□□□□□ -0.09
TOP3A-220ENST00000585031 XRCC2O43543 280 aa14.48□□□□□ -0.09
TOP3A-220ENST00000585031 ZFPL1O95159 310 aa14.48□□□□□ -0.09
TOP3A-220ENST00000585031 FADS2O95864 444 aaKnown RBP14.48□□□□□ -0.09
TOP3A-220ENST00000585031 IFNGP01579 166 aa14.48□□□□□ -0.09
TOP3A-220ENST00000585031 CHRM2P08172 466 aa14.48□□□□□ -0.09
TOP3A-220ENST00000585031 CCL3L1P16619 93 aa14.48□□□□□ -0.09
TOP3A-220ENST00000585031 DCTDP32321 178 aa14.48□□□□□ -0.09
TOP3A-220ENST00000585031 GABRA2P47869 451 aa14.48□□□□□ -0.09
TOP3A-220ENST00000585031 ST3GAL4Q11206 333 aa14.48□□□□□ -0.09
TOP3A-220ENST00000585031 ZNF782Q6ZMW2 699 aaPredicted RBP14.48□□□□□ -0.09
TOP3A-220ENST00000585031 ETV3LQ6ZN32 361 aa14.48□□□□□ -0.09
TOP3A-220ENST00000585031 PRSS45Q7RTY3 260 aa14.48□□□□□ -0.09
TOP3A-220ENST00000585031 CLVS1Q8IUQ0 354 aaPredicted RBP14.48□□□□□ -0.09
TOP3A-220ENST00000585031 GID4Q8IVV7 300 aa14.48□□□□□ -0.09
TOP3A-220ENST00000585031 TMEM185AQ8NFB2 350 aa14.48□□□□□ -0.09
TOP3A-220ENST00000585031 OR13F1Q8NGS4 319 aa14.48□□□□□ -0.09
TOP3A-220ENST00000585031 REEP6Q96HR9 211 aa14.48□□□□□ -0.09
TOP3A-220ENST00000585031 KCNJ15Q99712 375 aa14.48□□□□□ -0.09
TOP3A-220ENST00000585031 OPA3Q9H6K4 179 aa14.48□□□□□ -0.09
TOP3A-220ENST00000585031 HEXA-AS1Q9H8Q6 139 aa14.48□□□□□ -0.09
TOP3A-220ENST00000585031 AMBNQ9NP70 447 aa14.48□□□□□ -0.09
TOP3A-220ENST00000585031 H2AFY2Q9P0M6 372 aaPredicted RBP14.48□□□□□ -0.09
TOP3A-220ENST00000585031 NLKQ9UBE8 527 aa14.48□□□□□ -0.09
TOP3A-220ENST00000585031 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.48□□□□□ -0.09
TOP3A-220ENST00000585031 RIIAD1A6NNX1 92 aa14.47□□□□□ -0.09
TOP3A-220ENST00000585031 TBX1O43435 398 aa14.47□□□□□ -0.09
TOP3A-220ENST00000585031 DBTP11182 482 aaKnown RBP14.47□□□□□ -0.09
TOP3A-220ENST00000585031 ZNF823P16415 610 aa14.47□□□□□ -0.09
TOP3A-220ENST00000585031 SLC15A1P46059 708 aa14.47□□□□□ -0.09
TOP3A-220ENST00000585031 GSK3AP49840 483 aa14.47□□□□□ -0.09
TOP3A-220ENST00000585031 EFNB1P98172 346 aa14.47□□□□□ -0.09
TOP3A-220ENST00000585031 ZNF91Q05481 1191 aa14.47□□□□□ -0.09
TOP3A-220ENST00000585031 CNPY1Q3B7I2 92 aa14.47□□□□□ -0.09
TOP3A-220ENST00000585031 SLC35F1Q5T1Q4 408 aa14.47□□□□□ -0.09
TOP3A-220ENST00000585031 CYB561A3Q8NBI2 242 aa14.47□□□□□ -0.09
TOP3A-220ENST00000585031 OR51L1Q8NGJ5 315 aa14.47□□□□□ -0.09
TOP3A-220ENST00000585031 MUC7Q8TAX7 377 aa14.47□□□□□ -0.09
TOP3A-220ENST00000585031 SLAMF6Q96DU3 332 aa14.47□□□□□ -0.09
TOP3A-220ENST00000585031 ACOT13Q9NPJ3 140 aa14.47□□□□□ -0.09
TOP3A-220ENST00000585031 CENPMQ9NSP4 180 aa14.47□□□□□ -0.09
TOP3A-220ENST00000585031 WARS2Q9UGM6 360 aaKnown RBP14.47□□□□□ -0.09
TOP3A-220ENST00000585031 KCNG2Q9UJ96 466 aa14.47□□□□□ -0.09
TOP3A-220ENST00000585031 TSSC4Q9Y5U2 329 aaPredicted RBP14.47□□□□□ -0.09
TOP3A-220ENST00000585031 PAICSP22234 425 aaKnown RBP14.46□□□□□ -0.09
TOP3A-220ENST00000585031 ACKR3P25106 362 aa14.46□□□□□ -0.09
TOP3A-220ENST00000585031 LGALS4P56470 323 aa14.46□□□□□ -0.09
TOP3A-220ENST00000585031 ZNF273Q14593 569 aa14.46□□□□□ -0.09
TOP3A-220ENST00000585031 SSX2Q16385 188 aa14.46□□□□□ -0.09
TOP3A-220ENST00000585031 ARSJQ5FYB0 599 aaPredicted RBP14.46□□□□□ -0.09
TOP3A-220ENST00000585031 FAM76BQ5HYJ3 339 aa14.46□□□□□ -0.09
TOP3A-220ENST00000585031 UBE2UQ5VVX9 321 aa14.46□□□□□ -0.09
TOP3A-220ENST00000585031 MRPL41Q8IXM3 137 aaKnown RBP14.46□□□□□ -0.09
TOP3A-220ENST00000585031 OR4M1Q8NGD0 313 aa14.46□□□□□ -0.09
TOP3A-220ENST00000585031 HPSE2Q8WWQ2 592 aa14.46□□□□□ -0.09
TOP3A-220ENST00000585031 OR5P3Q8WZ94 311 aa14.46□□□□□ -0.09
TOP3A-220ENST00000585031 TMEM80Q96HE8 168 aa14.46□□□□□ -0.09
TOP3A-220ENST00000585031 PAPOLGQ9BWT3 736 aaKnown RBP14.46□□□□□ -0.09
TOP3A-220ENST00000585031 CMC2Q9NRP2 79 aa14.46□□□□□ -0.09
TOP3A-220ENST00000585031 ODF3BA8MYP8 253 aa14.45□□□□□ -0.1
TOP3A-220ENST00000585031 IDH3BO43837 385 aa14.45□□□□□ -0.1
TOP3A-220ENST00000585031 ZNF3P17036 446 aa14.45□□□□□ -0.1
TOP3A-220ENST00000585031 DCKP27707 260 aa14.45□□□□□ -0.1
TOP3A-220ENST00000585031 PSMB9P28065 219 aa14.45□□□□□ -0.1
TOP3A-220ENST00000585031 MAP2K4P45985 399 aa14.45□□□□□ -0.1
TOP3A-220ENST00000585031 SLC25A1P53007 311 aa14.45□□□□□ -0.1
TOP3A-220ENST00000585031 TMBIM6P55061 237 aa14.45□□□□□ -0.1
TOP3A-220ENST00000585031 DLX6P56179 175 aa14.45□□□□□ -0.1
TOP3A-220ENST00000585031 RAB40BQ12829 278 aa14.45□□□□□ -0.1
TOP3A-220ENST00000585031 SYT6Q5T7P8 510 aaPredicted RBP14.45□□□□□ -0.1
TOP3A-220ENST00000585031 GPR107Q5VW38 600 aa14.45□□□□□ -0.1
TOP3A-220ENST00000585031 NXNL2Q5VZ03 156 aa14.45□□□□□ -0.1
TOP3A-220ENST00000585031 ZNF367Q7RTV3 350 aa14.45□□□□□ -0.1
TOP3A-220ENST00000585031 CD177Q8N6Q3 437 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms