RNA–Protein interactions for RNA: ENST00000583441.1

SMCHD1-209, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 657 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-209ENST00000583441 DOCK8Q8NF50 2099 aa2□□□□□ -2.09
SMCHD1-209ENST00000583441 LOC100506127A0A0U1RQW1 187 aa1.99□□□□□ -2.09
SMCHD1-209ENST00000583441 MGAT4DA6NG13 374 aa1.99□□□□□ -2.09
SMCHD1-209ENST00000583441 OR2AT4A6NND4 320 aa1.99□□□□□ -2.09
SMCHD1-209ENST00000583441 CD300LBA8K4G0 201 aa1.99□□□□□ -2.09
SMCHD1-209ENST00000583441 BOLA2-SMG1P6H3BVE0 249 aa1.99□□□□□ -2.09
SMCHD1-209ENST00000583441 CLDN34H7C241 214 aa1.99□□□□□ -2.09
SMCHD1-209ENST00000583441 K7EN84 100 aa1.99□□□□□ -2.09
SMCHD1-209ENST00000583441 SC5DO75845 299 aa1.99□□□□□ -2.09
SMCHD1-209ENST00000583441 NRASP01111 189 aa1.99□□□□□ -2.09
SMCHD1-209ENST00000583441 HRASP01112 189 aa1.99□□□□□ -2.09
SMCHD1-209ENST00000583441 KRASP01116 189 aa1.99□□□□□ -2.09
SMCHD1-209ENST00000583441 CD8AP01732 235 aa1.99□□□□□ -2.09
SMCHD1-209ENST00000583441 CCL2P13500 99 aa1.99□□□□□ -2.09
SMCHD1-209ENST00000583441 SLC6A1P30531 599 aa1.99□□□□□ -2.09
SMCHD1-209ENST00000583441 TTPAP49638 278 aa1.99□□□□□ -2.09
SMCHD1-209ENST00000583441 TSPAN5P62079 268 aa1.99□□□□□ -2.09
SMCHD1-209ENST00000583441 TNNC1P63316 161 aa1.99□□□□□ -2.09
SMCHD1-209ENST00000583441 XIAPP98170 497 aa1.99□□□□□ -2.09
SMCHD1-209ENST00000583441 STX4Q12846 297 aa1.99□□□□□ -2.09
SMCHD1-209ENST00000583441 BIKQ13323 160 aa1.99□□□□□ -2.09
SMCHD1-209ENST00000583441 TMED1Q13445 227 aa1.99□□□□□ -2.09
SMCHD1-209ENST00000583441 PSG3Q16557 428 aa1.99□□□□□ -2.09
SMCHD1-209ENST00000583441 Q3ZCU0 254 aa1.99□□□□□ -2.09
SMCHD1-209ENST00000583441 ZNF404Q494X3 552 aa1.99□□□□□ -2.09
SMCHD1-209ENST00000583441 CLLU1OSQ5K130 101 aa1.99□□□□□ -2.09
SMCHD1-209ENST00000583441 TBPL2Q6SJ96 375 aa1.99□□□□□ -2.09
SMCHD1-209ENST00000583441 CALHM3Q86XJ0 350 aa1.99□□□□□ -2.09
SMCHD1-209ENST00000583441 CYP4Z2PQ8N1L4 340 aa1.99□□□□□ -2.09
SMCHD1-209ENST00000583441 GAPTQ8N292 157 aa1.99□□□□□ -2.09
SMCHD1-209ENST00000583441 ZNF680Q8NEM1 530 aa1.99□□□□□ -2.09
SMCHD1-209ENST00000583441 PEBP4Q96S96 227 aa1.99□□□□□ -2.09
SMCHD1-209ENST00000583441 SEC22CQ9BRL7 303 aa1.99□□□□□ -2.09
SMCHD1-209ENST00000583441 METTL8Q9H825 291 aaKnown RBP1.99□□□□□ -2.09
SMCHD1-209ENST00000583441 ZNF302Q9NR11 478 aa1.99□□□□□ -2.09
SMCHD1-209ENST00000583441 DHCR7Q9UBM7 475 aaKnown RBP1.99□□□□□ -2.09
SMCHD1-209ENST00000583441 TAC3Q9UHF0 121 aa1.99□□□□□ -2.09
SMCHD1-209ENST00000583441 ZNF229Q9UJW7 825 aa1.99□□□□□ -2.09
SMCHD1-209ENST00000583441 SCN1AP35498 2009 aa1.98□□□□□ -2.09
SMCHD1-209ENST00000583441 IZUMO1RA6ND01 250 aa1.98□□□□□ -2.09
SMCHD1-209ENST00000583441 K7EM74 188 aa1.98□□□□□ -2.09
SMCHD1-209ENST00000583441 RGS5O15539 181 aa1.98□□□□□ -2.09
SMCHD1-209ENST00000583441 KCNK2O95069 426 aa1.98□□□□□ -2.09
SMCHD1-209ENST00000583441 CXorf1O96002 111 aa1.98□□□□□ -2.09
SMCHD1-209ENST00000583441 RLN2P04090 185 aa1.98□□□□□ -2.09
SMCHD1-209ENST00000583441 OR5AC1P0C628 307 aa1.98□□□□□ -2.09
SMCHD1-209ENST00000583441 GIMD1P0DJR0 217 aa1.98□□□□□ -2.09
SMCHD1-209ENST00000583441 RNASE2P10153 161 aaKnown RBP1.98□□□□□ -2.09
SMCHD1-209ENST00000583441 ELK4P28324 431 aa1.98□□□□□ -2.09
SMCHD1-209ENST00000583441 TEAD1P28347 426 aa1.98□□□□□ -2.09
SMCHD1-209ENST00000583441 KCNJ3P48549 501 aa1.98□□□□□ -2.09
SMCHD1-209ENST00000583441 TUFMP49411 452 aaKnown RBP1.98□□□□□ -2.09
SMCHD1-209ENST00000583441 RAB38P57729 211 aa1.98□□□□□ -2.09
SMCHD1-209ENST00000583441 RPS11P62280 158 aaKnown RBP eCLIP1.98□□□□□ -2.09
SMCHD1-209ENST00000583441 RBX1P62877 108 aa1.98□□□□□ -2.09
SMCHD1-209ENST00000583441 C2orf80Q0P641 193 aa1.98□□□□□ -2.09
SMCHD1-209ENST00000583441 ELOCQ15369 112 aa1.98□□□□□ -2.09
SMCHD1-209ENST00000583441 GUSBP1Q15486 140 aa1.98□□□□□ -2.09
SMCHD1-209ENST00000583441 TNXAQ16473 311 aa1.98□□□□□ -2.09
SMCHD1-209ENST00000583441 SGPP2Q8IWX5 399 aa1.98□□□□□ -2.09
SMCHD1-209ENST00000583441 ATPAF2Q8N5M1 289 aa1.98□□□□□ -2.09
SMCHD1-209ENST00000583441 LINC00337Q8N6G1 96 aa1.98□□□□□ -2.09
SMCHD1-209ENST00000583441 DRAXINQ8NBI3 349 aaPredicted RBP1.98□□□□□ -2.09
SMCHD1-209ENST00000583441 ACBD4Q8NC06 268 aa1.98□□□□□ -2.09
SMCHD1-209ENST00000583441 ZNF555Q8NEP9 628 aa1.98□□□□□ -2.09
SMCHD1-209ENST00000583441 C1orf64Q8NEQ6 169 aa1.98□□□□□ -2.09
SMCHD1-209ENST00000583441 OR1P1Q8NH06 330 aa1.98□□□□□ -2.09
SMCHD1-209ENST00000583441 TMEM239Q8WW34 195 aa1.98□□□□□ -2.09
SMCHD1-209ENST00000583441 DERL3Q96Q80 235 aa1.98□□□□□ -2.09
SMCHD1-209ENST00000583441 THTPAQ9BU02 230 aa1.98□□□□□ -2.09
SMCHD1-209ENST00000583441 NXF2Q9GZY0 626 aaKnown RBP1.98□□□□□ -2.09
SMCHD1-209ENST00000583441 FAM60AQ9NP50 221 aa1.98□□□□□ -2.09
SMCHD1-209ENST00000583441 DIABLOQ9NR28 239 aa1.98□□□□□ -2.09
SMCHD1-209ENST00000583441 AGPAT3Q9NRZ7 376 aa1.98□□□□□ -2.09
SMCHD1-209ENST00000583441 KLF13Q9Y2Y9 288 aaPredicted RBP1.98□□□□□ -2.09
SMCHD1-209ENST00000583441 LOC389332A0A1B0GUA5 103 aa1.97□□□□□ -2.09
SMCHD1-209ENST00000583441 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.97□□□□□ -2.09
SMCHD1-209ENST00000583441 PLPP3O14495 311 aa1.97□□□□□ -2.09
SMCHD1-209ENST00000583441 CNMDO75829 334 aa1.97□□□□□ -2.09
SMCHD1-209ENST00000583441 IGKV1D-16P01601 117 aa1.97□□□□□ -2.09
SMCHD1-209ENST00000583441 CECR9P0C854 216 aa1.97□□□□□ -2.09
SMCHD1-209ENST00000583441 TAC1P20366 129 aa1.97□□□□□ -2.09
SMCHD1-209ENST00000583441 IL12BP29460 328 aa1.97□□□□□ -2.09
SMCHD1-209ENST00000583441 XKP51811 444 aa1.97□□□□□ -2.09
SMCHD1-209ENST00000583441 BNIP2Q12982 314 aa1.97□□□□□ -2.09
SMCHD1-209ENST00000583441 USF2Q15853 346 aaPredicted RBP1.97□□□□□ -2.09
SMCHD1-209ENST00000583441 CEACAM16Q2WEN9 425 aa1.97□□□□□ -2.09
SMCHD1-209ENST00000583441 TTMPQ5BVD1 217 aa1.97□□□□□ -2.09
SMCHD1-209ENST00000583441 UBE2NLQ5JXB2 153 aa1.97□□□□□ -2.09
SMCHD1-209ENST00000583441 TMEM69Q5SWH9 247 aa1.97□□□□□ -2.09
SMCHD1-209ENST00000583441 FAM131AQ6UXB0 335 aa1.97□□□□□ -2.09
SMCHD1-209ENST00000583441 SPICQ8N5J4 248 aa1.97□□□□□ -2.09
SMCHD1-209ENST00000583441 OR8G5Q8NG78 346 aa1.97□□□□□ -2.09
SMCHD1-209ENST00000583441 NELFBQ8WX92 580 aa1.97□□□□□ -2.09
SMCHD1-209ENST00000583441 C22orf15Q8WYQ4 148 aa1.97□□□□□ -2.09
SMCHD1-209ENST00000583441 CCDC124Q96CT7 223 aaKnown RBP1.97□□□□□ -2.09
SMCHD1-209ENST00000583441 PPP1R36Q96LQ0 422 aa1.97□□□□□ -2.09
SMCHD1-209ENST00000583441 YPEL4Q96NS1 127 aa1.97□□□□□ -2.09
SMCHD1-209ENST00000583441 RTBDNQ9BSG5 229 aaPredicted RBP1.97□□□□□ -2.09
SMCHD1-209ENST00000583441 BEX2Q9BXY8 128 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms