RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 Q8IYB0 196 aa13.76□□□□□ -0.21
CDK5RAP3-228ENST00000583363 BATF2Q8N1L9 274 aa13.76□□□□□ -0.21
CDK5RAP3-228ENST00000583363 TMEM104Q8NE00 496 aa13.76□□□□□ -0.21
CDK5RAP3-228ENST00000583363 CMTM3Q96MX0 182 aa13.76□□□□□ -0.21
CDK5RAP3-228ENST00000583363 CST11Q9H112 138 aa13.76□□□□□ -0.21
CDK5RAP3-228ENST00000583363 BANF2Q9H503 90 aa13.76□□□□□ -0.21
CDK5RAP3-228ENST00000583363 CXorf56Q9H5V9 222 aa13.76□□□□□ -0.21
CDK5RAP3-228ENST00000583363 HES4Q9HCC6 221 aa13.76□□□□□ -0.21
CDK5RAP3-228ENST00000583363 RBFOX1Q9NWB1 397 aaKnown RBP13.76□□□□□ -0.21
CDK5RAP3-228ENST00000583363 RASL12Q9NYN1 266 aa13.76□□□□□ -0.21
CDK5RAP3-228ENST00000583363 CACNG2Q9Y698 323 aa13.76□□□□□ -0.21
CDK5RAP3-228ENST00000583363 USF3Q68DE3 2245 aa13.75□□□□□ -0.21
CDK5RAP3-228ENST00000583363 DNHD1Q96M86 4753 aa13.75□□□□□ -0.21
CDK5RAP3-228ENST00000583363 SRRM5B3KS81 715 aa13.75□□□□□ -0.21
CDK5RAP3-228ENST00000583363 C3orf80F5H4A9 247 aa13.75□□□□□ -0.21
CDK5RAP3-228ENST00000583363 CRTAPO75718 401 aaPredicted RBP13.75□□□□□ -0.21
CDK5RAP3-228ENST00000583363 CYB5R3P00387 301 aaPredicted RBP13.75□□□□□ -0.21
CDK5RAP3-228ENST00000583363 GTF2F2P13984 249 aa13.75□□□□□ -0.21
CDK5RAP3-228ENST00000583363 IRF2P14316 349 aa13.75□□□□□ -0.21
CDK5RAP3-228ENST00000583363 RAB6AP20340 208 aa13.75□□□□□ -0.21
CDK5RAP3-228ENST00000583363 EFNA4P52798 201 aa13.75□□□□□ -0.21
CDK5RAP3-228ENST00000583363 EFNB2P52799 333 aa13.75□□□□□ -0.21
CDK5RAP3-228ENST00000583363 FAM58AQ8N1B3 248 aa13.75□□□□□ -0.21
CDK5RAP3-228ENST00000583363 GCSAMQ8N6F7 178 aa13.75□□□□□ -0.21
CDK5RAP3-228ENST00000583363 CCL17Q92583 94 aa13.75□□□□□ -0.21
CDK5RAP3-228ENST00000583363 RDH5Q92781 318 aa13.75□□□□□ -0.21
CDK5RAP3-228ENST00000583363 HPS1Q92902 700 aa13.75□□□□□ -0.21
CDK5RAP3-228ENST00000583363 YIPF5Q969M3 257 aa13.75□□□□□ -0.21
CDK5RAP3-228ENST00000583363 MRPS24Q96EL2 167 aaKnown RBP13.75□□□□□ -0.21
CDK5RAP3-228ENST00000583363 FOXC2Q99958 501 aa13.75□□□□□ -0.21
CDK5RAP3-228ENST00000583363 C6orf62Q9GZU0 229 aaPredicted RBP13.75□□□□□ -0.21
CDK5RAP3-228ENST00000583363 HMG20AQ9NP66 347 aa13.75□□□□□ -0.21
CDK5RAP3-228ENST00000583363 TMEM106BQ9NUM4 274 aa13.75□□□□□ -0.21
CDK5RAP3-228ENST00000583363 ZNF701Q9NV72 531 aaPredicted RBP13.75□□□□□ -0.21
CDK5RAP3-228ENST00000583363 LRRC30A6NM36 301 aa13.74□□□□□ -0.21
CDK5RAP3-228ENST00000583363 LYNX1G3V0Z9 82 aa13.74□□□□□ -0.21
CDK5RAP3-228ENST00000583363 TMEM178BH3BS89 294 aa13.74□□□□□ -0.21
CDK5RAP3-228ENST00000583363 WNT9BO14905 357 aa13.74□□□□□ -0.21
CDK5RAP3-228ENST00000583363 HPGDSO60760 199 aa13.74□□□□□ -0.21
CDK5RAP3-228ENST00000583363 NDUFS7O75251 213 aa13.74□□□□□ -0.21
CDK5RAP3-228ENST00000583363 CLPXO76031 633 aa13.74□□□□□ -0.21
CDK5RAP3-228ENST00000583363 MPIG6BO95866 241 aa13.74□□□□□ -0.21
CDK5RAP3-228ENST00000583363 LYNX1P0DP58 116 aa13.74□□□□□ -0.21
CDK5RAP3-228ENST00000583363 DAOP14920 347 aa13.74□□□□□ -0.21
CDK5RAP3-228ENST00000583363 PAX1P15863 534 aa13.74□□□□□ -0.21
CDK5RAP3-228ENST00000583363 MGMTP16455 207 aa13.74□□□□□ -0.21
CDK5RAP3-228ENST00000583363 EGR1P18146 543 aa13.74□□□□□ -0.21
CDK5RAP3-228ENST00000583363 GLRA1P23415 457 aa13.74□□□□□ -0.21
CDK5RAP3-228ENST00000583363 FGF12P61328 243 aa13.74□□□□□ -0.21
CDK5RAP3-228ENST00000583363 HOXA4Q00056 320 aaPredicted RBP13.74□□□□□ -0.21
CDK5RAP3-228ENST00000583363 HFEQ30201 348 aa13.74□□□□□ -0.21
CDK5RAP3-228ENST00000583363 ACP7Q6ZNF0 438 aa13.74□□□□□ -0.21
CDK5RAP3-228ENST00000583363 OSR2Q8N2R0 312 aa13.74□□□□□ -0.21
CDK5RAP3-228ENST00000583363 SAMD12Q8N8I0 201 aa13.74□□□□□ -0.21
CDK5RAP3-228ENST00000583363 OR51T1Q8NGJ9 327 aa13.74□□□□□ -0.21
CDK5RAP3-228ENST00000583363 OR6Q1Q8NGQ2 317 aa13.74□□□□□ -0.21
CDK5RAP3-228ENST00000583363 FAM46BQ96A09 425 aa13.74□□□□□ -0.21
CDK5RAP3-228ENST00000583363 TM2D1Q9BX74 207 aa13.74□□□□□ -0.21
CDK5RAP3-228ENST00000583363 WDR13Q9H1Z4 485 aa13.74□□□□□ -0.21
CDK5RAP3-228ENST00000583363 ABCG5Q9H222 651 aa13.74□□□□□ -0.21
CDK5RAP3-228ENST00000583363 MIXL1Q9H2W2 232 aa13.74□□□□□ -0.21
CDK5RAP3-228ENST00000583363 DLL4Q9NR61 685 aa13.74□□□□□ -0.21
CDK5RAP3-228ENST00000583363 DCAF16Q9NXF7 216 aa13.74□□□□□ -0.21
CDK5RAP3-228ENST00000583363 PEX16Q9Y5Y5 336 aa13.74□□□□□ -0.21
CDK5RAP3-228ENST00000583363 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.73□□□□□ -0.21
CDK5RAP3-228ENST00000583363 LY6HO94772 140 aa13.73□□□□□ -0.21
CDK5RAP3-228ENST00000583363 NXPH2O95156 264 aa13.73□□□□□ -0.21
CDK5RAP3-228ENST00000583363 RPS27AP62979 156 aaKnown RBP13.73□□□□□ -0.21
CDK5RAP3-228ENST00000583363 NHLRC3Q5JS37 347 aa13.73□□□□□ -0.21
CDK5RAP3-228ENST00000583363 UBE2NLQ5JXB2 153 aa13.73□□□□□ -0.21
CDK5RAP3-228ENST00000583363 FAM201AQ5SY85 155 aa13.73□□□□□ -0.21
CDK5RAP3-228ENST00000583363 BIVMQ86UB2 503 aa13.73□□□□□ -0.21
CDK5RAP3-228ENST00000583363 CMTM4Q8IZR5 234 aa13.73□□□□□ -0.21
CDK5RAP3-228ENST00000583363 C1orf87Q8N0U7 546 aa13.73□□□□□ -0.21
CDK5RAP3-228ENST00000583363 FAM89BQ8N5H3 189 aa13.73□□□□□ -0.21
CDK5RAP3-228ENST00000583363 BOLLQ8N9W6 283 aaKnown RBP13.73□□□□□ -0.21
CDK5RAP3-228ENST00000583363 EMG1Q92979 244 aaKnown RBP13.73□□□□□ -0.21
CDK5RAP3-228ENST00000583363 NINJ1Q92982 152 aa13.73□□□□□ -0.21
CDK5RAP3-228ENST00000583363 SLC25A38Q96DW6 304 aa13.73□□□□□ -0.21
CDK5RAP3-228ENST00000583363 TMEM59Q9BXS4 323 aa13.73□□□□□ -0.21
CDK5RAP3-228ENST00000583363 SELENOIQ9C0D9 397 aa13.73□□□□□ -0.21
CDK5RAP3-228ENST00000583363 LPAR5Q9H1C0 372 aa13.73□□□□□ -0.21
CDK5RAP3-228ENST00000583363 RHBDL2Q9NX52 303 aa13.73□□□□□ -0.21
CDK5RAP3-228ENST00000583363 NPTNQ9Y639 398 aa13.73□□□□□ -0.21
CDK5RAP3-228ENST00000583363 RGS5O15539 181 aa13.72□□□□□ -0.21
CDK5RAP3-228ENST00000583363 RP2O75695 350 aa13.72□□□□□ -0.21
CDK5RAP3-228ENST00000583363 APOA1P02647 267 aa13.72□□□□□ -0.21
CDK5RAP3-228ENST00000583363 EIF4EP06730 217 aaKnown RBP13.72□□□□□ -0.21
CDK5RAP3-228ENST00000583363 PRKACAP17612 351 aa13.72□□□□□ -0.21
CDK5RAP3-228ENST00000583363 ELK1P19419 428 aa13.72□□□□□ -0.21
CDK5RAP3-228ENST00000583363 GMFBP60983 142 aa13.72□□□□□ -0.21
CDK5RAP3-228ENST00000583363 FAM90A1Q86YD7 464 aa13.72□□□□□ -0.21
CDK5RAP3-228ENST00000583363 SEH1LQ96EE3 360 aa13.72□□□□□ -0.21
CDK5RAP3-228ENST00000583363 Q96M66 194 aa13.72□□□□□ -0.21
CDK5RAP3-228ENST00000583363 URM1Q9BTM9 101 aaKnown RBP13.72□□□□□ -0.21
CDK5RAP3-228ENST00000583363 GSX1Q9H4S2 264 aaPredicted RBP13.72□□□□□ -0.21
CDK5RAP3-228ENST00000583363 EDARQ9UNE0 448 aa13.72□□□□□ -0.21
CDK5RAP3-228ENST00000583363 ST3GAL6Q9Y274 331 aa13.72□□□□□ -0.21
CDK5RAP3-228ENST00000583363 PLEKHA6Q9Y2H5 1048 aa13.72□□□□□ -0.21
CDK5RAP3-228ENST00000583363 A0A0A6YYD4 124 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms