RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 MPC1Q9Y5U8 109 aa9.91□□□□□ -0.82
TOP3A-215ENST00000583328 TMEM14AQ9Y6G1 99 aa9.91□□□□□ -0.82
TOP3A-215ENST00000583328 IGKV1D-17A0A075B6S4 117 aa9.9□□□□□ -0.82
TOP3A-215ENST00000583328 FAM90A8PA6NJQ4 464 aa9.9□□□□□ -0.82
TOP3A-215ENST00000583328 ZNF850A8MQ14 1090 aa9.9□□□□□ -0.82
TOP3A-215ENST00000583328 F2RL2O00254 374 aa9.9□□□□□ -0.82
TOP3A-215ENST00000583328 SYNGR1O43759 233 aa9.9□□□□□ -0.82
TOP3A-215ENST00000583328 LYNP07948 512 aa9.9□□□□□ -0.82
TOP3A-215ENST00000583328 MRPL3P09001 348 aaKnown RBP9.9□□□□□ -0.82
TOP3A-215ENST00000583328 ERVFRD-1P60508 538 aa9.9□□□□□ -0.82
TOP3A-215ENST00000583328 RPL31P62899 125 aaKnown RBP9.9□□□□□ -0.82
TOP3A-215ENST00000583328 PRDX4Q13162 271 aa9.9□□□□□ -0.82
TOP3A-215ENST00000583328 DCTN2Q13561 401 aaKnown RBP9.9□□□□□ -0.82
TOP3A-215ENST00000583328 TMEM200BQ69YZ2 307 aa9.9□□□□□ -0.82
TOP3A-215ENST00000583328 CENPVQ7Z7K6 275 aaPredicted RBP9.9□□□□□ -0.82
TOP3A-215ENST00000583328 C8orf59Q8N0T1 100 aaPredicted RBP9.9□□□□□ -0.82
TOP3A-215ENST00000583328 DYNAPQ8N1N2 210 aa9.9□□□□□ -0.82
TOP3A-215ENST00000583328 APH1BQ8WW43 257 aa9.9□□□□□ -0.82
TOP3A-215ENST00000583328 OR5P3Q8WZ94 311 aa9.9□□□□□ -0.82
TOP3A-215ENST00000583328 PIGCQ92535 297 aa9.9□□□□□ -0.82
TOP3A-215ENST00000583328 HIST1H2AAQ96QV6 131 aa9.9□□□□□ -0.82
TOP3A-215ENST00000583328 ABHD6Q9BV23 337 aa9.9□□□□□ -0.82
TOP3A-215ENST00000583328 OR10A2Q9H208 303 aa9.9□□□□□ -0.82
TOP3A-215ENST00000583328 ABCB9Q9NP78 766 aa9.9□□□□□ -0.82
TOP3A-215ENST00000583328 BRD7Q9NPI1 651 aa9.9□□□□□ -0.82
TOP3A-215ENST00000583328 AASSQ9UDR5 926 aa9.9□□□□□ -0.82
TOP3A-215ENST00000583328 TSSC4Q9Y5U2 329 aaPredicted RBP9.9□□□□□ -0.82
TOP3A-215ENST00000583328 WBP4O75554 376 aaKnown RBP9.89□□□□□ -0.83
TOP3A-215ENST00000583328 APOC1P02654 83 aa9.89□□□□□ -0.83
TOP3A-215ENST00000583328 ARG1P05089 322 aa9.89□□□□□ -0.83
TOP3A-215ENST00000583328 GNAO1P09471 354 aa9.89□□□□□ -0.83
TOP3A-215ENST00000583328 ALOX5APP20292 161 aa9.89□□□□□ -0.83
TOP3A-215ENST00000583328 ATP6V1E1P36543 226 aa9.89□□□□□ -0.83
TOP3A-215ENST00000583328 ISL1P61371 349 aa9.89□□□□□ -0.83
TOP3A-215ENST00000583328 EGFEM1PQ0D2K5 195 aa9.89□□□□□ -0.83
TOP3A-215ENST00000583328 SSX2Q16385 188 aa9.89□□□□□ -0.83
TOP3A-215ENST00000583328 FAM76BQ5HYJ3 339 aa9.89□□□□□ -0.83
TOP3A-215ENST00000583328 ZNF782Q6ZMW2 699 aaPredicted RBP9.89□□□□□ -0.83
TOP3A-215ENST00000583328 SLC35F2Q8IXU6 374 aa9.89□□□□□ -0.83
TOP3A-215ENST00000583328 C11orf42Q8N5U0 333 aa9.89□□□□□ -0.83
TOP3A-215ENST00000583328 OR4M1Q8NGD0 313 aa9.89□□□□□ -0.83
TOP3A-215ENST00000583328 OR52H1Q8NGJ2 320 aa9.89□□□□□ -0.83
TOP3A-215ENST00000583328 RNF133Q8WVZ7 376 aa9.89□□□□□ -0.83
TOP3A-215ENST00000583328 FOXRED1Q96CU9 486 aaPredicted RBP9.89□□□□□ -0.83
TOP3A-215ENST00000583328 MALSU1Q96EH3 234 aa9.89□□□□□ -0.83
TOP3A-215ENST00000583328 RNFT2Q96EX2 444 aa9.89□□□□□ -0.83
TOP3A-215ENST00000583328 PGAM5Q96HS1 289 aa9.89□□□□□ -0.83
TOP3A-215ENST00000583328 GPR61Q9BZJ8 451 aa9.89□□□□□ -0.83
TOP3A-215ENST00000583328 INPP5EQ9NRR6 644 aa9.89□□□□□ -0.83
TOP3A-215ENST00000583328 ZNF319Q9P2F9 582 aa9.89□□□□□ -0.83
TOP3A-215ENST00000583328 LAMP5Q9UJQ1 280 aa9.89□□□□□ -0.83
TOP3A-215ENST00000583328 ZNF222Q9UK12 451 aa9.89□□□□□ -0.83
TOP3A-215ENST00000583328 LRP12Q9Y561 859 aa9.89□□□□□ -0.83
TOP3A-215ENST00000583328 H3BUI4 141 aa9.88□□□□□ -0.83
TOP3A-215ENST00000583328 CST4P01036 141 aa9.88□□□□□ -0.83
TOP3A-215ENST00000583328 OR2T7P0C7T2 308 aa9.88□□□□□ -0.83
TOP3A-215ENST00000583328 NHLRC4P0CG21 123 aaPredicted RBP9.88□□□□□ -0.83
TOP3A-215ENST00000583328 DBTP11182 482 aaKnown RBP9.88□□□□□ -0.83
TOP3A-215ENST00000583328 CCL3L1P16619 93 aa9.88□□□□□ -0.83
TOP3A-215ENST00000583328 OPRL1P41146 370 aa9.88□□□□□ -0.83
TOP3A-215ENST00000583328 ZNF121P58317 390 aaPredicted RBP9.88□□□□□ -0.83
TOP3A-215ENST00000583328 COL10A1Q03692 680 aa9.88□□□□□ -0.83
TOP3A-215ENST00000583328 ZNF91Q05481 1191 aa9.88□□□□□ -0.83
TOP3A-215ENST00000583328 KCTD18Q6PI47 426 aaPredicted RBP9.88□□□□□ -0.83
TOP3A-215ENST00000583328 RNF144BQ7Z419 303 aa9.88□□□□□ -0.83
TOP3A-215ENST00000583328 THAP5Q7Z6K1 395 aa9.88□□□□□ -0.83
TOP3A-215ENST00000583328 OR2T27Q8NH04 317 aa9.88□□□□□ -0.83
TOP3A-215ENST00000583328 ZNF671Q8TAW3 534 aa9.88□□□□□ -0.83
TOP3A-215ENST00000583328 CNIH3Q8TBE1 160 aa9.88□□□□□ -0.83
TOP3A-215ENST00000583328 FBLIM1Q8WUP2 373 aa9.88□□□□□ -0.83
TOP3A-215ENST00000583328 THEM6Q8WUY1 208 aa9.88□□□□□ -0.83
TOP3A-215ENST00000583328 ASB17Q8WXJ9 295 aa9.88□□□□□ -0.83
TOP3A-215ENST00000583328 MYDGFQ969H8 173 aa9.88□□□□□ -0.83
TOP3A-215ENST00000583328 SDSLQ96GA7 329 aa9.88□□□□□ -0.83
TOP3A-215ENST00000583328 AMELYQ99218 206 aa9.88□□□□□ -0.83
TOP3A-215ENST00000583328 FGF23Q9GZV9 251 aaPredicted RBP9.88□□□□□ -0.83
TOP3A-215ENST00000583328 RGCCQ9H4X1 137 aa9.88□□□□□ -0.83
TOP3A-215ENST00000583328 COPS3Q9UNS2 423 aa9.88□□□□□ -0.83
TOP3A-215ENST00000583328 KLHDC2Q9Y2U9 406 aa9.88□□□□□ -0.83
TOP3A-215ENST00000583328 RPL36Q9Y3U8 105 aaKnown RBP9.88□□□□□ -0.83
TOP3A-215ENST00000583328 TBL2Q9Y4P3 447 aaKnown RBP9.88□□□□□ -0.83
TOP3A-215ENST00000583328 U3KQK5 164 aa9.88□□□□□ -0.83
TOP3A-215ENST00000583328 RFPL4AA6NLU0 287 aa9.87□□□□□ -0.83
TOP3A-215ENST00000583328 ZNF670-ZNF695F2Z2N8 137 aa9.87□□□□□ -0.83
TOP3A-215ENST00000583328 RFPL4AL1F8VTS6 287 aa9.87□□□□□ -0.83
TOP3A-215ENST00000583328 C3orf84H3BNL1 204 aa9.87□□□□□ -0.83
TOP3A-215ENST00000583328 APOL3O95236 402 aa9.87□□□□□ -0.83
TOP3A-215ENST00000583328 H2BFMP0C1H6 154 aa9.87□□□□□ -0.83
TOP3A-215ENST00000583328 ACKR3P25106 362 aa9.87□□□□□ -0.83
TOP3A-215ENST00000583328 DCTDP32321 178 aa9.87□□□□□ -0.83
TOP3A-215ENST00000583328 GPM6AP51674 278 aa9.87□□□□□ -0.83
TOP3A-215ENST00000583328 HCCSP53701 268 aa9.87□□□□□ -0.83
TOP3A-215ENST00000583328 OR12D2P58182 307 aa9.87□□□□□ -0.83
TOP3A-215ENST00000583328 CXCR4P61073 352 aa9.87□□□□□ -0.83
TOP3A-215ENST00000583328 ACTC1P68032 377 aa9.87□□□□□ -0.83
TOP3A-215ENST00000583328 ACTA1P68133 377 aa9.87□□□□□ -0.83
TOP3A-215ENST00000583328 RAB40BQ12829 278 aa9.87□□□□□ -0.83
TOP3A-215ENST00000583328 SMN1Q16637 294 aaKnown RBP9.87□□□□□ -0.83
TOP3A-215ENST00000583328 TCTEX1D4Q5JR98 221 aa9.87□□□□□ -0.83
TOP3A-215ENST00000583328 KHDC1LQ5JSQ8 128 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms