RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 ACOT13Q9NPJ3 140 aa2.38□□□□□ -2.03
SMCHD1-205ENST00000581383 OR2S2Q9NQN1 319 aa2.38□□□□□ -2.03
SMCHD1-205ENST00000581383 PARP11Q9NR21 331 aa2.38□□□□□ -2.03
SMCHD1-205ENST00000581383 ANXA10Q9UJ72 324 aa2.38□□□□□ -2.03
SMCHD1-205ENST00000581383 ACOT9Q9Y305 439 aa2.38□□□□□ -2.03
SMCHD1-205ENST00000581383 NCAPD3P42695 1498 aa2.38□□□□□ -2.03
SMCHD1-205ENST00000581383 TCAPO15273 167 aa2.37□□□□□ -2.03
SMCHD1-205ENST00000581383 OR2A4O95047 310 aa2.37□□□□□ -2.03
SMCHD1-205ENST00000581383 VAPBO95292 243 aa2.37□□□□□ -2.03
SMCHD1-205ENST00000581383 RLN2P04090 185 aa2.37□□□□□ -2.03
SMCHD1-205ENST00000581383 CDK1P06493 297 aa2.37□□□□□ -2.03
SMCHD1-205ENST00000581383 TAC1P20366 129 aa2.37□□□□□ -2.03
SMCHD1-205ENST00000581383 ELOCQ15369 112 aa2.37□□□□□ -2.03
SMCHD1-205ENST00000581383 IDNKQ5T6J7 187 aa2.37□□□□□ -2.03
SMCHD1-205ENST00000581383 OR5H2Q8NGV7 314 aa2.37□□□□□ -2.03
SMCHD1-205ENST00000581383 CDKL2Q92772 493 aa2.37□□□□□ -2.03
SMCHD1-205ENST00000581383 TNFRSF14Q92956 283 aa2.37□□□□□ -2.03
SMCHD1-205ENST00000581383 RILPQ96NA2 401 aa2.37□□□□□ -2.03
SMCHD1-205ENST00000581383 QKIQ96PU8 341 aaKnown RBP eCLIP2.37□□□□□ -2.03
SMCHD1-205ENST00000581383 OR2A7Q96R45 310 aa2.37□□□□□ -2.03
SMCHD1-205ENST00000581383 PEBP4Q96S96 227 aa2.37□□□□□ -2.03
SMCHD1-205ENST00000581383 COPS4Q9BT78 406 aa2.37□□□□□ -2.03
SMCHD1-205ENST00000581383 VSIRQ9H7M9 311 aa2.37□□□□□ -2.03
SMCHD1-205ENST00000581383 TMEM38BQ9NVV0 291 aa2.37□□□□□ -2.03
SMCHD1-205ENST00000581383 VAPAQ9P0L0 249 aa2.37□□□□□ -2.03
SMCHD1-205ENST00000581383 INSIG2Q9Y5U4 225 aa2.37□□□□□ -2.03
SMCHD1-205ENST00000581383 HMGXB3Q12766 1538 aa2.37□□□□□ -2.03
SMCHD1-205ENST00000581383 MIA3Q5JRA6 1907 aa2.36□□□□□ -2.03
SMCHD1-205ENST00000581383 E7EWF7 191 aa2.36□□□□□ -2.03
SMCHD1-205ENST00000581383 NDUFS8O00217 210 aa2.36□□□□□ -2.03
SMCHD1-205ENST00000581383 UPK1AO00322 258 aa2.36□□□□□ -2.03
SMCHD1-205ENST00000581383 ZNF593O00488 134 aaPredicted RBP2.36□□□□□ -2.03
SMCHD1-205ENST00000581383 IGKV4-1P06312 121 aa2.36□□□□□ -2.03
SMCHD1-205ENST00000581383 BGNP21810 368 aa2.36□□□□□ -2.03
SMCHD1-205ENST00000581383 NUDT2P50583 147 aa2.36□□□□□ -2.03
SMCHD1-205ENST00000581383 BAMBIQ13145 260 aa2.36□□□□□ -2.03
SMCHD1-205ENST00000581383 VAMP3Q15836 100 aa2.36□□□□□ -2.03
SMCHD1-205ENST00000581383 UGT2A3Q6UWM9 527 aa2.36□□□□□ -2.03
SMCHD1-205ENST00000581383 FA2HQ7L5A8 372 aa2.36□□□□□ -2.03
SMCHD1-205ENST00000581383 DOK4Q8TEW6 326 aa2.36□□□□□ -2.03
SMCHD1-205ENST00000581383 FXYD5Q96DB9 178 aa2.36□□□□□ -2.03
SMCHD1-205ENST00000581383 LRRC39Q96DD0 335 aa2.36□□□□□ -2.03
SMCHD1-205ENST00000581383 VAT1Q99536 393 aa2.36□□□□□ -2.03
SMCHD1-205ENST00000581383 SIKE1Q9BRV8 207 aa2.36□□□□□ -2.03
SMCHD1-205ENST00000581383 THTPAQ9BU02 230 aa2.36□□□□□ -2.03
SMCHD1-205ENST00000581383 PRRG3Q9BZD7 231 aa2.36□□□□□ -2.03
SMCHD1-205ENST00000581383 SHCBP1LQ9BZQ2 653 aa2.36□□□□□ -2.03
SMCHD1-205ENST00000581383 SRRQ9GZT4 340 aa2.36□□□□□ -2.03
SMCHD1-205ENST00000581383 PRORYQ9H606 182 aa2.36□□□□□ -2.03
SMCHD1-205ENST00000581383 ASB7Q9H672 318 aa2.36□□□□□ -2.03
SMCHD1-205ENST00000581383 ZNF302Q9NR11 478 aa2.36□□□□□ -2.03
SMCHD1-205ENST00000581383 SDHAF3Q9NRP4 125 aa2.36□□□□□ -2.03
SMCHD1-205ENST00000581383 INIPQ9NRY2 104 aa2.36□□□□□ -2.03
SMCHD1-205ENST00000581383 BAZ1AQ9NRL2 1556 aaPredicted RBP2.36□□□□□ -2.03
SMCHD1-205ENST00000581383 IGKV2-24A0A0C4DH68 120 aa2.35□□□□□ -2.03
SMCHD1-205ENST00000581383 LOC389332A0A1B0GUA5 103 aa2.35□□□□□ -2.03
SMCHD1-205ENST00000581383 RAB19A4D1S5 217 aa2.35□□□□□ -2.03
SMCHD1-205ENST00000581383 OR2AT4A6NND4 320 aa2.35□□□□□ -2.03
SMCHD1-205ENST00000581383 C9JQL5 133 aa2.35□□□□□ -2.03
SMCHD1-205ENST00000581383 BOLA2-SMG1P6H3BVE0 249 aa2.35□□□□□ -2.03
SMCHD1-205ENST00000581383 KCNK2O95069 426 aa2.35□□□□□ -2.03
SMCHD1-205ENST00000581383 FSTL3O95633 263 aa2.35□□□□□ -2.03
SMCHD1-205ENST00000581383 SNRPAP09012 282 aaKnown RBP2.35□□□□□ -2.03
SMCHD1-205ENST00000581383 CCNOP22674 350 aa2.35□□□□□ -2.03
SMCHD1-205ENST00000581383 TEAD1P28347 426 aa2.35□□□□□ -2.03
SMCHD1-205ENST00000581383 SLC6A1P30531 599 aa2.35□□□□□ -2.03
SMCHD1-205ENST00000581383 RANBP1P43487 201 aa2.35□□□□□ -2.03
SMCHD1-205ENST00000581383 ACOT2P49753 483 aa2.35□□□□□ -2.03
SMCHD1-205ENST00000581383 SLC18A1P54219 525 aa2.35□□□□□ -2.03
SMCHD1-205ENST00000581383 STX4Q12846 297 aa2.35□□□□□ -2.03
SMCHD1-205ENST00000581383 SSX1Q16384 188 aa2.35□□□□□ -2.03
SMCHD1-205ENST00000581383 LINC00303Q3SY05 128 aa2.35□□□□□ -2.03
SMCHD1-205ENST00000581383 ACTL10Q5JWF8 245 aa2.35□□□□□ -2.03
SMCHD1-205ENST00000581383 RESP18Q5W5W9 173 aa2.35□□□□□ -2.03
SMCHD1-205ENST00000581383 FAHD1Q6P587 224 aa2.35□□□□□ -2.03
SMCHD1-205ENST00000581383 GAPTQ8N292 157 aa2.35□□□□□ -2.03
SMCHD1-205ENST00000581383 PDCL2Q8N4E4 241 aa2.35□□□□□ -2.03
SMCHD1-205ENST00000581383 ZFP62Q8NB50 900 aaPredicted RBP2.35□□□□□ -2.03
SMCHD1-205ENST00000581383 OR8K3Q8NH51 312 aa2.35□□□□□ -2.03
SMCHD1-205ENST00000581383 CLHC1Q8NHS4 586 aa2.35□□□□□ -2.03
SMCHD1-205ENST00000581383 LGALS14Q8TCE9 139 aa2.35□□□□□ -2.03
SMCHD1-205ENST00000581383 PPP1R36Q96LQ0 422 aa2.35□□□□□ -2.03
SMCHD1-205ENST00000581383 GLT1D1Q96MS3 346 aa2.35□□□□□ -2.03
SMCHD1-205ENST00000581383 CIB1Q99828 191 aa2.35□□□□□ -2.03
SMCHD1-205ENST00000581383 WDR55Q9H6Y2 383 aaPredicted RBP2.35□□□□□ -2.03
SMCHD1-205ENST00000581383 RDH14Q9HBH5 336 aa2.35□□□□□ -2.03
SMCHD1-205ENST00000581383 ZNF492Q9P255 531 aa2.35□□□□□ -2.03
SMCHD1-205ENST00000581383 RBMX2Q9Y388 322 aaKnown RBP2.35□□□□□ -2.03
SMCHD1-205ENST00000581383 MRC2Q9UBG0 1479 aa2.34□□□□□ -2.03
SMCHD1-205ENST00000581383 KIR2DS1A0A191URI9 304 aa2.34□□□□□ -2.03
SMCHD1-205ENST00000581383 GOLGA6L4A6NEF3 574 aa2.34□□□□□ -2.03
SMCHD1-205ENST00000581383 RGS5O15539 181 aa2.34□□□□□ -2.03
SMCHD1-205ENST00000581383 KLHL2O95198 593 aa2.34□□□□□ -2.03
SMCHD1-205ENST00000581383 CD8AP01732 235 aa2.34□□□□□ -2.03
SMCHD1-205ENST00000581383 S100A9P06702 114 aaKnown RBP2.34□□□□□ -2.03
SMCHD1-205ENST00000581383 IMPA1P29218 277 aa2.34□□□□□ -2.03
SMCHD1-205ENST00000581383 HTR2BP41595 481 aa2.34□□□□□ -2.03
SMCHD1-205ENST00000581383 XKP51811 444 aa2.34□□□□□ -2.03
SMCHD1-205ENST00000581383 TNNC1P63316 161 aa2.34□□□□□ -2.03
SMCHD1-205ENST00000581383 FMODQ06828 376 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms