RNA–Protein interactions for RNA: ENST00000578985.5

IFT20-208, Transcript of intraflagellar transport 20, humanhuman

TSL 3 BASIC

Gene IFT20, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-208ENST00000578985 MED30Q96HR3 178 aa12.8□□□□□ -0.36
IFT20-208ENST00000578985 SMURF1Q9HCE7 757 aa12.8□□□□□ -0.36
IFT20-208ENST00000578985 TMEM160Q9NX00 188 aa12.8□□□□□ -0.36
IFT20-208ENST00000578985 DUX4Q9UBX2 424 aa12.8□□□□□ -0.36
IFT20-208ENST00000578985 ZNF222Q9UK12 451 aa12.8□□□□□ -0.36
IFT20-208ENST00000578985 NIPBLQ6KC79 2804 aaeCLIP12.79□□□□□ -0.36
IFT20-208ENST00000578985 PPIAL4CA0A0B4J2A2 164 aa12.79□□□□□ -0.36
IFT20-208ENST00000578985 IGKV1-12A0A0C4DH73 117 aa12.79□□□□□ -0.36
IFT20-208ENST00000578985 A0A0G2JMP0 313 aa12.79□□□□□ -0.36
IFT20-208ENST00000578985 A0A0X1KG70 313 aa12.79□□□□□ -0.36
IFT20-208ENST00000578985 RFPL4AA6NLU0 287 aa12.79□□□□□ -0.36
IFT20-208ENST00000578985 RFPL4AL1F8VTS6 287 aa12.79□□□□□ -0.36
IFT20-208ENST00000578985 NDUFB3O43676 98 aa12.79□□□□□ -0.36
IFT20-208ENST00000578985 KNG1P01042 644 aa12.79□□□□□ -0.36
IFT20-208ENST00000578985 IGKV1D-12P01611 117 aa12.79□□□□□ -0.36
IFT20-208ENST00000578985 PSMA1P25786 263 aaKnown RBP12.79□□□□□ -0.36
IFT20-208ENST00000578985 PRDX2P32119 198 aa12.79□□□□□ -0.36
IFT20-208ENST00000578985 IL13RA1P78552 427 aa12.79□□□□□ -0.36
IFT20-208ENST00000578985 IKZF1Q13422 519 aa12.79□□□□□ -0.36
IFT20-208ENST00000578985 FAM27D1Q5T7N8 215 aa12.79□□□□□ -0.36
IFT20-208ENST00000578985 DCAF12L2Q5VW00 463 aa12.79□□□□□ -0.36
IFT20-208ENST00000578985 OR4M2Q8NGB6 313 aa12.79□□□□□ -0.36
IFT20-208ENST00000578985 EMG1Q92979 244 aaKnown RBP12.79□□□□□ -0.36
IFT20-208ENST00000578985 GAFA1Q96PS6 74 aa12.79□□□□□ -0.36
IFT20-208ENST00000578985 MMP26Q9NRE1 261 aa12.79□□□□□ -0.36
IFT20-208ENST00000578985 SF3B6Q9Y3B4 125 aaKnown RBP12.79□□□□□ -0.36
IFT20-208ENST00000578985 FN1P02751 2386 aaKnown RBP12.79□□□□□ -0.36
IFT20-208ENST00000578985 LOC105371242A0A075B767 164 aa12.78□□□□□ -0.36
IFT20-208ENST00000578985 MAGEA13PA6NCF6 341 aa12.78□□□□□ -0.36
IFT20-208ENST00000578985 GABRPO00591 440 aa12.78□□□□□ -0.36
IFT20-208ENST00000578985 SIGLEC5O15389 551 aa12.78□□□□□ -0.36
IFT20-208ENST00000578985 FCN3O75636 299 aa12.78□□□□□ -0.36
IFT20-208ENST00000578985 SC5DO75845 299 aa12.78□□□□□ -0.36
IFT20-208ENST00000578985 RGS9O75916 674 aaPredicted RBP12.78□□□□□ -0.36
IFT20-208ENST00000578985 KDM4BO94953 1096 aa12.78□□□□□ -0.36
IFT20-208ENST00000578985 TNFAIP8O95379 198 aa12.78□□□□□ -0.36
IFT20-208ENST00000578985 MAS1P04201 325 aa12.78□□□□□ -0.36
IFT20-208ENST00000578985 SELLP14151 372 aa12.78□□□□□ -0.36
IFT20-208ENST00000578985 GATA3P23771 443 aa12.78□□□□□ -0.36
IFT20-208ENST00000578985 PSMB9P28065 219 aa12.78□□□□□ -0.36
IFT20-208ENST00000578985 GABRA5P31644 462 aa12.78□□□□□ -0.36
IFT20-208ENST00000578985 ZNF93P35789 620 aaPredicted RBP12.78□□□□□ -0.36
IFT20-208ENST00000578985 SSX1Q16384 188 aa12.78□□□□□ -0.36
IFT20-208ENST00000578985 LRRC10Q5BKY1 277 aa12.78□□□□□ -0.36
IFT20-208ENST00000578985 FAM120AOSQ5T036 256 aa12.78□□□□□ -0.36
IFT20-208ENST00000578985 CD276Q5ZPR3 534 aa12.78□□□□□ -0.36
IFT20-208ENST00000578985 FAHD2BQ6P2I3 314 aaPredicted RBP12.78□□□□□ -0.36
IFT20-208ENST00000578985 FIP1L1Q6UN15 594 aaKnown RBP12.78□□□□□ -0.36
IFT20-208ENST00000578985 TMEM91Q6ZNR0 172 aa12.78□□□□□ -0.36
IFT20-208ENST00000578985 FAM58AQ8N1B3 248 aa12.78□□□□□ -0.36
IFT20-208ENST00000578985 CD177Q8N6Q3 437 aa12.78□□□□□ -0.36
IFT20-208ENST00000578985 TNFAIP8L1Q8WVP5 186 aa12.78□□□□□ -0.36
IFT20-208ENST00000578985 RAB40AQ8WXH6 277 aa12.78□□□□□ -0.36
IFT20-208ENST00000578985 ST8SIA4Q92187 359 aa12.78□□□□□ -0.36
IFT20-208ENST00000578985 SDSLQ96GA7 329 aa12.78□□□□□ -0.36
IFT20-208ENST00000578985 FAHD2AQ96GK7 314 aa12.78□□□□□ -0.36
IFT20-208ENST00000578985 NKX3-1Q99801 234 aaPredicted RBP12.78□□□□□ -0.36
IFT20-208ENST00000578985 RHOFQ9HBH0 211 aa12.78□□□□□ -0.36
IFT20-208ENST00000578985 RBFOX1Q9NWB1 397 aaKnown RBP12.78□□□□□ -0.36
IFT20-208ENST00000578985 OR14J1Q9UGF5 321 aa12.78□□□□□ -0.36
IFT20-208ENST00000578985 C22orf46C9J442 243 aa12.77□□□□□ -0.37
IFT20-208ENST00000578985 J3QLI3 93 aa12.77□□□□□ -0.37
IFT20-208ENST00000578985 UCHL1P09936 223 aa12.77□□□□□ -0.37
IFT20-208ENST00000578985 CALCBP10092 127 aa12.77□□□□□ -0.37
IFT20-208ENST00000578985 PRKACAP17612 351 aa12.77□□□□□ -0.37
IFT20-208ENST00000578985 PTGFRP43088 359 aa12.77□□□□□ -0.37
IFT20-208ENST00000578985 OR3A4PP47883 348 aa12.77□□□□□ -0.37
IFT20-208ENST00000578985 CEBPDP49716 269 aaPredicted RBP12.77□□□□□ -0.37
IFT20-208ENST00000578985 GP2P55259 537 aaKnown RBP12.77□□□□□ -0.37
IFT20-208ENST00000578985 PAX2Q02962 417 aa12.77□□□□□ -0.37
IFT20-208ENST00000578985 DGUOKQ16854 277 aa12.77□□□□□ -0.37
IFT20-208ENST00000578985 HSD17B12Q53GQ0 312 aa12.77□□□□□ -0.37
IFT20-208ENST00000578985 C1QL2Q7Z5L3 287 aa12.77□□□□□ -0.37
IFT20-208ENST00000578985 FGFRL1Q8N441 504 aa12.77□□□□□ -0.37
IFT20-208ENST00000578985 PNLDC1Q8NA58 520 aaKnown RBP12.77□□□□□ -0.37
IFT20-208ENST00000578985 PXT1Q8NFP0 134 aa12.77□□□□□ -0.37
IFT20-208ENST00000578985 PHYHIPQ92561 330 aa12.77□□□□□ -0.37
IFT20-208ENST00000578985 FAM192AQ9GZU8 254 aa12.77□□□□□ -0.37
IFT20-208ENST00000578985 SHARPINQ9H0F6 387 aa12.77□□□□□ -0.37
IFT20-208ENST00000578985 PPIL3Q9H2H8 161 aaKnown RBP12.77□□□□□ -0.37
IFT20-208ENST00000578985 TCF7L1Q9HCS4 588 aa12.77□□□□□ -0.37
IFT20-208ENST00000578985 HMG20AQ9NP66 347 aa12.77□□□□□ -0.37
IFT20-208ENST00000578985 SLC25A10Q9UBX3 287 aaPredicted RBP12.77□□□□□ -0.37
IFT20-208ENST00000578985 LPAR3Q9UBY5 353 aa12.77□□□□□ -0.37
IFT20-208ENST00000578985 METRNQ9UJH8 293 aa12.77□□□□□ -0.37
IFT20-208ENST00000578985 MAB21L2Q9Y586 359 aa12.77□□□□□ -0.37
IFT20-208ENST00000578985 INSIG2Q9Y5U4 225 aa12.77□□□□□ -0.37
IFT20-208ENST00000578985 IGHV2-70DA0A0C4DH43 119 aa12.76□□□□□ -0.37
IFT20-208ENST00000578985 MEGF11A6BM72 1044 aa12.76□□□□□ -0.37
IFT20-208ENST00000578985 CRLF1O75462 422 aa12.76□□□□□ -0.37
IFT20-208ENST00000578985 ECDO95905 644 aaPredicted RBP12.76□□□□□ -0.37
IFT20-208ENST00000578985 SFTPBP07988 381 aa12.76□□□□□ -0.37
IFT20-208ENST00000578985 HNF1AP20823 631 aa12.76□□□□□ -0.37
IFT20-208ENST00000578985 CAPZA1P52907 286 aa12.76□□□□□ -0.37
IFT20-208ENST00000578985 FABP5Q01469 135 aa12.76□□□□□ -0.37
IFT20-208ENST00000578985 C11orf91Q3C1V1 193 aa12.76□□□□□ -0.37
IFT20-208ENST00000578985 BTNL3Q6UXE8 466 aa12.76□□□□□ -0.37
IFT20-208ENST00000578985 ASCL4Q6XD76 172 aa12.76□□□□□ -0.37
IFT20-208ENST00000578985 BTN2A1Q7KYR7 527 aa12.76□□□□□ -0.37
IFT20-208ENST00000578985 CDH26Q8IXH8 852 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms