RNA–Protein interactions for RNA: ENST00000578367.1

LINC01543-201, Transcript of long intergenic non-protein coding RNA 1543, humanhuman

TSL 5 BASIC

Gene LINC01543, Length 900 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01543-201ENST00000578367 FAM90A13PP0C7W8 464 aa11.61□□□□□ -0.55
LINC01543-201ENST00000578367 FAM90A14PP0C7W9 464 aa11.61□□□□□ -0.55
LINC01543-201ENST00000578367 FAM90A24PP0C7X0 464 aa11.61□□□□□ -0.55
LINC01543-201ENST00000578367 GTF2F2P13984 249 aa11.61□□□□□ -0.55
LINC01543-201ENST00000578367 EGR1P18146 543 aa11.61□□□□□ -0.55
LINC01543-201ENST00000578367 OR3A4PP47883 348 aa11.61□□□□□ -0.55
LINC01543-201ENST00000578367 NPY4RP50391 375 aa11.61□□□□□ -0.55
LINC01543-201ENST00000578367 DYNC1I2Q13409 638 aaKnown RBP11.61□□□□□ -0.55
LINC01543-201ENST00000578367 IL13RA2Q14627 380 aa11.61□□□□□ -0.55
LINC01543-201ENST00000578367 RAB11BQ15907 218 aa11.61□□□□□ -0.55
LINC01543-201ENST00000578367 CTF1Q16619 201 aa11.61□□□□□ -0.55
LINC01543-201ENST00000578367 STUMQ69YW2 141 aa11.61□□□□□ -0.55
LINC01543-201ENST00000578367 GLIPR1L1Q6UWM5 242 aa11.61□□□□□ -0.55
LINC01543-201ENST00000578367 USP43Q70EL4 1123 aa11.61□□□□□ -0.55
LINC01543-201ENST00000578367 NLRC3Q7RTR2 1065 aa11.61□□□□□ -0.55
LINC01543-201ENST00000578367 CHST4Q8NCG5 386 aa11.61□□□□□ -0.55
LINC01543-201ENST00000578367 OR4D6Q8NGJ1 314 aa11.61□□□□□ -0.55
LINC01543-201ENST00000578367 OR5D18Q8NGL1 313 aa11.61□□□□□ -0.55
LINC01543-201ENST00000578367 ANGPTL6Q8NI99 470 aa11.61□□□□□ -0.55
LINC01543-201ENST00000578367 KCNG3Q8TAE7 436 aa11.61□□□□□ -0.55
LINC01543-201ENST00000578367 EMG1Q92979 244 aaKnown RBP11.61□□□□□ -0.55
LINC01543-201ENST00000578367 PTX4Q96A99 478 aa11.61□□□□□ -0.55
LINC01543-201ENST00000578367 SDSLQ96GA7 329 aa11.61□□□□□ -0.55
LINC01543-201ENST00000578367 C1orf159Q96HA4 380 aa11.61□□□□□ -0.55
LINC01543-201ENST00000578367 GFI1Q99684 422 aa11.61□□□□□ -0.55
LINC01543-201ENST00000578367 TMEM246Q9BRR3 403 aa11.61□□□□□ -0.55
LINC01543-201ENST00000578367 REG4Q9BYZ8 158 aa11.61□□□□□ -0.55
LINC01543-201ENST00000578367 PATZ1Q9HBE1 687 aaKnown RBP11.61□□□□□ -0.55
LINC01543-201ENST00000578367 PCDHB10Q9UN67 800 aa11.61□□□□□ -0.55
LINC01543-201ENST00000578367 ING4Q9UNL4 249 aa11.61□□□□□ -0.55
LINC01543-201ENST00000578367 SMIM31A0A1B0GVY4 71 aa11.6□□□□□ -0.55
LINC01543-201ENST00000578367 ISPDA4D126 451 aa11.6□□□□□ -0.55
LINC01543-201ENST00000578367 NKX6-3A6NJ46 265 aa11.6□□□□□ -0.55
LINC01543-201ENST00000578367 F5H0A9 414 aaPredicted RBP11.6□□□□□ -0.55
LINC01543-201ENST00000578367 C3orf80F5H4A9 247 aa11.6□□□□□ -0.55
LINC01543-201ENST00000578367 ANGPTL7O43827 346 aa11.6□□□□□ -0.55
LINC01543-201ENST00000578367 CDRT1O95170 752 aa11.6□□□□□ -0.55
LINC01543-201ENST00000578367 PLATP00750 562 aa11.6□□□□□ -0.55
LINC01543-201ENST00000578367 SFTPBP07988 381 aa11.6□□□□□ -0.55
LINC01543-201ENST00000578367 CHRM2P08172 466 aa11.6□□□□□ -0.55
LINC01543-201ENST00000578367 PSG2P11465 335 aa11.6□□□□□ -0.55
LINC01543-201ENST00000578367 ARSBP15848 533 aa11.6□□□□□ -0.55
LINC01543-201ENST00000578367 BCL3P20749 454 aa11.6□□□□□ -0.55
LINC01543-201ENST00000578367 CD80P33681 288 aa11.6□□□□□ -0.55
LINC01543-201ENST00000578367 ZNF788Q6ZQV5 615 aa11.6□□□□□ -0.55
LINC01543-201ENST00000578367 C1QL2Q7Z5L3 287 aa11.6□□□□□ -0.55
LINC01543-201ENST00000578367 CLVS1Q8IUQ0 354 aaPredicted RBP11.6□□□□□ -0.55
LINC01543-201ENST00000578367 OSR2Q8N2R0 312 aa11.6□□□□□ -0.55
LINC01543-201ENST00000578367 ZNF561Q8N587 486 aa11.6□□□□□ -0.55
LINC01543-201ENST00000578367 WFDC11Q8NEX6 87 aa11.6□□□□□ -0.55
LINC01543-201ENST00000578367 SLC25A28Q96A46 364 aa11.6□□□□□ -0.55
LINC01543-201ENST00000578367 DMRTB1Q96MA1 342 aa11.6□□□□□ -0.55
LINC01543-201ENST00000578367 C1orf147Q96MC9 270 aaPredicted RBP11.6□□□□□ -0.55
LINC01543-201ENST00000578367 WDR13Q9H1Z4 485 aa11.6□□□□□ -0.55
LINC01543-201ENST00000578367 ZNF665Q9H7R5 613 aa11.6□□□□□ -0.55
LINC01543-201ENST00000578367 IFT22Q9H7X7 185 aa11.6□□□□□ -0.55
LINC01543-201ENST00000578367 ELL3Q9HB65 397 aaPredicted RBP11.6□□□□□ -0.55
LINC01543-201ENST00000578367 ZNF222Q9UK12 451 aa11.6□□□□□ -0.55
LINC01543-201ENST00000578367 CSMD2Q7Z408 3487 aa11.6□□□□□ -0.55
LINC01543-201ENST00000578367 SETXQ7Z333 2677 aaKnown RBP11.6□□□□□ -0.55
LINC01543-201ENST00000578367 A0A0G2JK05 382 aa11.59□□□□□ -0.55
LINC01543-201ENST00000578367 CEACAM18A8MTB9 384 aa11.59□□□□□ -0.55
LINC01543-201ENST00000578367 SH2D1BO14796 132 aa11.59□□□□□ -0.55
LINC01543-201ENST00000578367 WNT9BO14905 357 aa11.59□□□□□ -0.55
LINC01543-201ENST00000578367 SIGLEC5O15389 551 aa11.59□□□□□ -0.55
LINC01543-201ENST00000578367 IGHV2-5P01817 119 aa11.59□□□□□ -0.55
LINC01543-201ENST00000578367 CALCBP10092 127 aa11.59□□□□□ -0.55
LINC01543-201ENST00000578367 PRKACAP17612 351 aa11.59□□□□□ -0.55
LINC01543-201ENST00000578367 PRDX2P32119 198 aa11.59□□□□□ -0.55
LINC01543-201ENST00000578367 NPBWR2P48146 333 aa11.59□□□□□ -0.55
LINC01543-201ENST00000578367 LMO4P61968 165 aa11.59□□□□□ -0.55
LINC01543-201ENST00000578367 MPV17LQ2QL34 196 aa11.59□□□□□ -0.55
LINC01543-201ENST00000578367 FAM201AQ5SY85 155 aa11.59□□□□□ -0.55
LINC01543-201ENST00000578367 AVPI1Q5T686 147 aa11.59□□□□□ -0.55
LINC01543-201ENST00000578367 SFRP4Q6FHJ7 346 aaPredicted RBP11.59□□□□□ -0.55
LINC01543-201ENST00000578367 SFXN4Q6P4A7 337 aa11.59□□□□□ -0.55
LINC01543-201ENST00000578367 RNF144BQ7Z419 303 aa11.59□□□□□ -0.55
LINC01543-201ENST00000578367 BOLLQ8N9W6 283 aaKnown RBP11.59□□□□□ -0.55
LINC01543-201ENST00000578367 OR8B3Q8NGG8 313 aa11.59□□□□□ -0.55
LINC01543-201ENST00000578367 CLDND2Q8NHS1 167 aa11.59□□□□□ -0.55
LINC01543-201ENST00000578367 PPP1R35Q8TAP8 253 aa11.59□□□□□ -0.55
LINC01543-201ENST00000578367 FAM3DQ96BQ1 224 aa11.59□□□□□ -0.55
LINC01543-201ENST00000578367 KCTD12Q96CX2 325 aaKnown RBP11.59□□□□□ -0.55
LINC01543-201ENST00000578367 NEIL1Q96FI4 390 aaPredicted RBP11.59□□□□□ -0.55
LINC01543-201ENST00000578367 ZNF488Q96MN9 340 aa11.59□□□□□ -0.55
LINC01543-201ENST00000578367 OR8B2Q96RD0 313 aa11.59□□□□□ -0.55
LINC01543-201ENST00000578367 FAM234AQ9H0X4 552 aa11.59□□□□□ -0.55
LINC01543-201ENST00000578367 SPACA1Q9HBV2 294 aa11.59□□□□□ -0.55
LINC01543-201ENST00000578367 RBFOX1Q9NWB1 397 aaKnown RBP11.59□□□□□ -0.55
LINC01543-201ENST00000578367 ITGB1BP2Q9UKP3 347 aa11.59□□□□□ -0.55
LINC01543-201ENST00000578367 PRRC2AP48634 2157 aaKnown RBP11.59□□□□□ -0.55
LINC01543-201ENST00000578367 CSMD1Q96PZ7 3565 aa11.58□□□□□ -0.56
LINC01543-201ENST00000578367 IGKV1D-17A0A075B6S4 117 aa11.58□□□□□ -0.56
LINC01543-201ENST00000578367 IGHV4-61A0A0C4DH41 118 aa11.58□□□□□ -0.56
LINC01543-201ENST00000578367 RFPL4AA6NLU0 287 aa11.58□□□□□ -0.56
LINC01543-201ENST00000578367 TMEM14DPA8MWL7 114 aa11.58□□□□□ -0.56
LINC01543-201ENST00000578367 RFPL4AL1F8VTS6 287 aa11.58□□□□□ -0.56
LINC01543-201ENST00000578367 HTR3BO95264 441 aa11.58□□□□□ -0.56
LINC01543-201ENST00000578367 ECDO95905 644 aaPredicted RBP11.58□□□□□ -0.56
LINC01543-201ENST00000578367 GLAP06280 429 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms