RNA–Protein interactions for RNA: ENST00000578217.1

SLC46A1-201, Transcript of solute carrier family 46 member 1, humanhuman

TSL 4

Gene SLC46A1, Length 596 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1-201ENST00000578217 ZNF676Q8N7Q3 588 aa6.17□□□□□ -1.42
SLC46A1-201ENST00000578217 ANKRD42Q8N9B4 389 aa6.17□□□□□ -1.42
SLC46A1-201ENST00000578217 EIF1ADQ8N9N8 165 aaKnown RBP6.17□□□□□ -1.42
SLC46A1-201ENST00000578217 POC1AQ8NBT0 407 aa6.17□□□□□ -1.42
SLC46A1-201ENST00000578217 C4orf3Q8WVX3 66 aa6.17□□□□□ -1.42
SLC46A1-201ENST00000578217 DLX4Q92988 240 aaPredicted RBP6.17□□□□□ -1.42
SLC46A1-201ENST00000578217 ITFG2Q969R8 447 aa6.17□□□□□ -1.42
SLC46A1-201ENST00000578217 FNDC11Q9BVV2 318 aa6.17□□□□□ -1.42
SLC46A1-201ENST00000578217 ALX4Q9H161 411 aaPredicted RBP6.17□□□□□ -1.42
SLC46A1-201ENST00000578217 KLK15Q9H2R5 256 aa6.17□□□□□ -1.42
SLC46A1-201ENST00000578217 KRCC1Q9NPI7 259 aaPredicted RBP6.17□□□□□ -1.42
SLC46A1-201ENST00000578217 MPC1Q9Y5U8 109 aa6.17□□□□□ -1.42
SLC46A1-201ENST00000578217 COMMD3-BMI1R4GMX3 469 aa6.17□□□□□ -1.42
SLC46A1-201ENST00000578217 HSPG2P98160 4391 aa6.17□□□□□ -1.42
SLC46A1-201ENST00000578217 DHRS12A0PJE2 317 aa6.16□□□□□ -1.42
SLC46A1-201ENST00000578217 A8MZ25 164 aa6.16□□□□□ -1.42
SLC46A1-201ENST00000578217 I3L521 148 aa6.16□□□□□ -1.42
SLC46A1-201ENST00000578217 M0QZK8 103 aa6.16□□□□□ -1.42
SLC46A1-201ENST00000578217 FXYD1O00168 92 aa6.16□□□□□ -1.42
SLC46A1-201ENST00000578217 SPARCP09486 303 aa6.16□□□□□ -1.42
SLC46A1-201ENST00000578217 BRS3P32247 399 aa6.16□□□□□ -1.42
SLC46A1-201ENST00000578217 POU3F4P49335 361 aa6.16□□□□□ -1.42
SLC46A1-201ENST00000578217 SLURP1P55000 103 aa6.16□□□□□ -1.42
SLC46A1-201ENST00000578217 STX1BP61266 288 aa6.16□□□□□ -1.42
SLC46A1-201ENST00000578217 SRSF3P84103 164 aaKnown RBP6.16□□□□□ -1.42
SLC46A1-201ENST00000578217 EWSR1Q01844 656 aaKnown RBP eCLIP6.16□□□□□ -1.42
SLC46A1-201ENST00000578217 BDH1Q02338 343 aa6.16□□□□□ -1.42
SLC46A1-201ENST00000578217 IFFO1Q0D2I5 559 aa6.16□□□□□ -1.42
SLC46A1-201ENST00000578217 FOXE3Q13461 319 aa6.16□□□□□ -1.42
SLC46A1-201ENST00000578217 IL18R1Q13478 541 aa6.16□□□□□ -1.42
SLC46A1-201ENST00000578217 GPR50Q13585 617 aa6.16□□□□□ -1.42
SLC46A1-201ENST00000578217 EDDM3AQ14507 147 aa6.16□□□□□ -1.42
SLC46A1-201ENST00000578217 PNLIPRP3Q17RR3 467 aa6.16□□□□□ -1.42
SLC46A1-201ENST00000578217 LRRC23Q53EV4 343 aaPredicted RBP6.16□□□□□ -1.42
SLC46A1-201ENST00000578217 TPTE2P1Q5T6R2 138 aa6.16□□□□□ -1.42
SLC46A1-201ENST00000578217 SMARCD3Q6STE5 483 aa6.16□□□□□ -1.42
SLC46A1-201ENST00000578217 RNF113BQ8IZP6 322 aaKnown RBP6.16□□□□□ -1.42
SLC46A1-201ENST00000578217 ABHD12Q8N2K0 398 aa6.16□□□□□ -1.42
SLC46A1-201ENST00000578217 FAM71E2Q8N5Q1 922 aa6.16□□□□□ -1.42
SLC46A1-201ENST00000578217 COMMD1Q8N668 190 aa6.16□□□□□ -1.42
SLC46A1-201ENST00000578217 ASCC1Q8N9N2 400 aaKnown RBP6.16□□□□□ -1.42
SLC46A1-201ENST00000578217 CSNK2A3Q8NEV1 391 aa6.16□□□□□ -1.42
SLC46A1-201ENST00000578217 OR56B4Q8NH76 319 aa6.16□□□□□ -1.42
SLC46A1-201ENST00000578217 MYOZ3Q8TDC0 251 aa6.16□□□□□ -1.42
SLC46A1-201ENST00000578217 RASSF5Q8WWW0 418 aa6.16□□□□□ -1.42
SLC46A1-201ENST00000578217 ARPC1AQ92747 370 aa6.16□□□□□ -1.42
SLC46A1-201ENST00000578217 ZNF714Q96N38 554 aa6.16□□□□□ -1.42
SLC46A1-201ENST00000578217 NRIP2Q9BQI9 281 aa6.16□□□□□ -1.42
SLC46A1-201ENST00000578217 HIPK2Q9H2X6 1198 aa6.16□□□□□ -1.42
SLC46A1-201ENST00000578217 ZNF286AQ9HBT8 521 aa6.16□□□□□ -1.42
SLC46A1-201ENST00000578217 UBR4Q5T4S7 5183 aa6.16□□□□□ -1.42
SLC46A1-201ENST00000578217 DMBT1Q9UGM3 2413 aaPredicted RBP6.15□□□□□ -1.42
SLC46A1-201ENST00000578217 DNAH17Q9UFH2 4485 aa6.15□□□□□ -1.42
SLC46A1-201ENST00000578217 DNAH6Q9C0G6 4158 aa6.15□□□□□ -1.42
SLC46A1-201ENST00000578217 TRBV4-1A0A0J9YWV2 114 aa6.15□□□□□ -1.42
SLC46A1-201ENST00000578217 UNC119BA6NIH7 251 aa6.15□□□□□ -1.42
SLC46A1-201ENST00000578217 OVOL1O14753 267 aa6.15□□□□□ -1.42
SLC46A1-201ENST00000578217 RENP00797 406 aa6.15□□□□□ -1.42
SLC46A1-201ENST00000578217 GYPBP06028 91 aa6.15□□□□□ -1.42
SLC46A1-201ENST00000578217 VIMP08670 466 aaKnown RBP6.15□□□□□ -1.42
SLC46A1-201ENST00000578217 GPR12P47775 334 aa6.15□□□□□ -1.42
SLC46A1-201ENST00000578217 RPS6KA3P51812 740 aa6.15□□□□□ -1.42
SLC46A1-201ENST00000578217 GNG3P63215 75 aa6.15□□□□□ -1.42
SLC46A1-201ENST00000578217 SLC35B1P78383 322 aa6.15□□□□□ -1.42
SLC46A1-201ENST00000578217 TAF13Q15543 124 aa6.15□□□□□ -1.42
SLC46A1-201ENST00000578217 SMIM21Q3B7S5 101 aa6.15□□□□□ -1.42
SLC46A1-201ENST00000578217 CXorf66Q5JRM2 361 aaPredicted RBP6.15□□□□□ -1.42
SLC46A1-201ENST00000578217 RNLSQ5VYX0 342 aa6.15□□□□□ -1.42
SLC46A1-201ENST00000578217 NANOGP8Q6NSW7 305 aa6.15□□□□□ -1.42
SLC46A1-201ENST00000578217 TIGD4Q8IY51 512 aa6.15□□□□□ -1.42
SLC46A1-201ENST00000578217 ZDHHC23Q8IYP9 409 aa6.15□□□□□ -1.42
SLC46A1-201ENST00000578217 OR52N4Q8NGI2 321 aa6.15□□□□□ -1.42
SLC46A1-201ENST00000578217 OR1N2Q8NGR9 330 aa6.15□□□□□ -1.42
SLC46A1-201ENST00000578217 ST6GALNAC6Q969X2 333 aa6.15□□□□□ -1.42
SLC46A1-201ENST00000578217 TMEM120AQ9BXJ8 343 aa6.15□□□□□ -1.42
SLC46A1-201ENST00000578217 ROPN1BQ9BZX4 212 aaPredicted RBP6.15□□□□□ -1.42
SLC46A1-201ENST00000578217 ROPN1Q9HAT0 212 aaPredicted RBP6.15□□□□□ -1.42
SLC46A1-201ENST00000578217 HES4Q9HCC6 221 aa6.15□□□□□ -1.42
SLC46A1-201ENST00000578217 PAPOLBQ9NRJ5 636 aaKnown RBP6.15□□□□□ -1.42
SLC46A1-201ENST00000578217 GPR173Q9NS66 373 aa6.15□□□□□ -1.42
SLC46A1-201ENST00000578217 IL36RNQ9UBH0 155 aa6.15□□□□□ -1.42
SLC46A1-201ENST00000578217 KCNG2Q9UJ96 466 aa6.15□□□□□ -1.42
SLC46A1-201ENST00000578217 A0A1W2PPI3 338 aa6.14□□□□□ -1.43
SLC46A1-201ENST00000578217 ARRDC5A6NEK1 342 aa6.14□□□□□ -1.43
SLC46A1-201ENST00000578217 ZNF878C9JN71 531 aa6.14□□□□□ -1.43
SLC46A1-201ENST00000578217 BUB1B-PAK6H3BSN5 160 aa6.14□□□□□ -1.43
SLC46A1-201ENST00000578217 ZNF593O00488 134 aaPredicted RBP6.14□□□□□ -1.43
SLC46A1-201ENST00000578217 ARPC3O15145 178 aa6.14□□□□□ -1.43
SLC46A1-201ENST00000578217 IFNA6P05013 189 aa6.14□□□□□ -1.43
SLC46A1-201ENST00000578217 CLUP10909 449 aa6.14□□□□□ -1.43
SLC46A1-201ENST00000578217 PSMB8P28062 276 aa6.14□□□□□ -1.43
SLC46A1-201ENST00000578217 KDELR2P33947 212 aa6.14□□□□□ -1.43
SLC46A1-201ENST00000578217 GABPB1Q06547 395 aaPredicted RBP6.14□□□□□ -1.43
SLC46A1-201ENST00000578217 CEACAM21Q3KPI0 293 aa6.14□□□□□ -1.43
SLC46A1-201ENST00000578217 TNFAIP8L3Q5GJ75 292 aa6.14□□□□□ -1.43
SLC46A1-201ENST00000578217 FANK1Q8TC84 345 aa6.14□□□□□ -1.43
SLC46A1-201ENST00000578217 LZICQ8WZA0 190 aa6.14□□□□□ -1.43
SLC46A1-201ENST00000578217 HSPB9Q9BQS6 159 aa6.14□□□□□ -1.43
SLC46A1-201ENST00000578217 FUZQ9BT04 418 aa6.14□□□□□ -1.43
SLC46A1-201ENST00000578217 TMEM109Q9BVC6 243 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms