RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 GIFP27352 417 aa9.35□□□□□ -0.91
CDK5RAP3-204ENST00000577664 OR3A4PP47883 348 aa9.35□□□□□ -0.91
CDK5RAP3-204ENST00000577664 MXD1Q05195 221 aa9.35□□□□□ -0.91
CDK5RAP3-204ENST00000577664 RAB11BQ15907 218 aa9.35□□□□□ -0.91
CDK5RAP3-204ENST00000577664 DGUOKQ16854 277 aa9.35□□□□□ -0.91
CDK5RAP3-204ENST00000577664 C2orf76Q3KRA6 126 aa9.35□□□□□ -0.91
CDK5RAP3-204ENST00000577664 PDLIM3Q53GG5 364 aaPredicted RBP9.35□□□□□ -0.91
CDK5RAP3-204ENST00000577664 PRAMEF6Q5VXH4 476 aa9.35□□□□□ -0.91
CDK5RAP3-204ENST00000577664 TEX36Q5VZQ5 186 aa9.35□□□□□ -0.91
CDK5RAP3-204ENST00000577664 SLC25A26Q70HW3 274 aa9.35□□□□□ -0.91
CDK5RAP3-204ENST00000577664 C1orf87Q8N0U7 546 aa9.35□□□□□ -0.91
CDK5RAP3-204ENST00000577664 JAGN1Q8N5M9 183 aa9.35□□□□□ -0.91
CDK5RAP3-204ENST00000577664 GCSAMQ8N6F7 178 aa9.35□□□□□ -0.91
CDK5RAP3-204ENST00000577664 NPRL2Q8WTW4 380 aa9.35□□□□□ -0.91
CDK5RAP3-204ENST00000577664 FAM3DQ96BQ1 224 aa9.35□□□□□ -0.91
CDK5RAP3-204ENST00000577664 GPER1Q99527 375 aa9.35□□□□□ -0.91
CDK5RAP3-204ENST00000577664 METTL9Q9H1A3 318 aa9.35□□□□□ -0.91
CDK5RAP3-204ENST00000577664 BARX1Q9HBU1 254 aaPredicted RBP9.35□□□□□ -0.91
CDK5RAP3-204ENST00000577664 TMEM106BQ9NUM4 274 aa9.35□□□□□ -0.91
CDK5RAP3-204ENST00000577664 C1orf123Q9NWV4 160 aa9.35□□□□□ -0.91
CDK5RAP3-204ENST00000577664 SPATA2Q9UM82 520 aa9.35□□□□□ -0.91
CDK5RAP3-204ENST00000577664 MRPS28Q9Y2Q9 187 aaKnown RBP9.35□□□□□ -0.91
CDK5RAP3-204ENST00000577664 NPTNQ9Y639 398 aa9.35□□□□□ -0.91
CDK5RAP3-204ENST00000577664 TANC2Q9HCD6 1990 aa9.35□□□□□ -0.91
CDK5RAP3-204ENST00000577664 CCDC160A6NGH7 325 aa9.34□□□□□ -0.91
CDK5RAP3-204ENST00000577664 LRRC30A6NM36 301 aa9.34□□□□□ -0.91
CDK5RAP3-204ENST00000577664 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.34□□□□□ -0.91
CDK5RAP3-204ENST00000577664 CYB5AP00167 134 aa9.34□□□□□ -0.91
CDK5RAP3-204ENST00000577664 SFTPBP07988 381 aa9.34□□□□□ -0.91
CDK5RAP3-204ENST00000577664 TMEM225BP0DP42 221 aa9.34□□□□□ -0.91
CDK5RAP3-204ENST00000577664 VSIG8P0DPA2 414 aa9.34□□□□□ -0.91
CDK5RAP3-204ENST00000577664 DAOP14920 347 aa9.34□□□□□ -0.91
CDK5RAP3-204ENST00000577664 ARSBP15848 533 aa9.34□□□□□ -0.91
CDK5RAP3-204ENST00000577664 MUC1P15941 1255 aaPredicted RBP9.34□□□□□ -0.91
CDK5RAP3-204ENST00000577664 RAB6AP20340 208 aa9.34□□□□□ -0.91
CDK5RAP3-204ENST00000577664 CPT2P23786 658 aa9.34□□□□□ -0.91
CDK5RAP3-204ENST00000577664 SOX6P35712 828 aa9.34□□□□□ -0.91
CDK5RAP3-204ENST00000577664 CDKN1AP38936 164 aa9.34□□□□□ -0.91
CDK5RAP3-204ENST00000577664 CAV3P56539 151 aa9.34□□□□□ -0.91
CDK5RAP3-204ENST00000577664 FGF12P61328 243 aa9.34□□□□□ -0.91
CDK5RAP3-204ENST00000577664 ZNF146Q15072 292 aa9.34□□□□□ -0.91
CDK5RAP3-204ENST00000577664 FAM189A2Q15884 450 aa9.34□□□□□ -0.91
CDK5RAP3-204ENST00000577664 HFEQ30201 348 aa9.34□□□□□ -0.91
CDK5RAP3-204ENST00000577664 ATPAF1Q5TC12 328 aaPredicted RBP9.34□□□□□ -0.91
CDK5RAP3-204ENST00000577664 GLIPR1L1Q6UWM5 242 aa9.34□□□□□ -0.91
CDK5RAP3-204ENST00000577664 LINC00299Q6ZSB3 139 aa9.34□□□□□ -0.91
CDK5RAP3-204ENST00000577664 ZNF826PQ6ZT77 177 aa9.34□□□□□ -0.91
CDK5RAP3-204ENST00000577664 MOGAT3Q86VF5 341 aa9.34□□□□□ -0.91
CDK5RAP3-204ENST00000577664 FAM89BQ8N5H3 189 aa9.34□□□□□ -0.91
CDK5RAP3-204ENST00000577664 OR11L1Q8NGX0 322 aa9.34□□□□□ -0.91
CDK5RAP3-204ENST00000577664 KCNG3Q8TAE7 436 aa9.34□□□□□ -0.91
CDK5RAP3-204ENST00000577664 TNFAIP8L1Q8WVP5 186 aa9.34□□□□□ -0.91
CDK5RAP3-204ENST00000577664 YIPF5Q969M3 257 aa9.34□□□□□ -0.91
CDK5RAP3-204ENST00000577664 CEP19Q96LK0 163 aa9.34□□□□□ -0.91
CDK5RAP3-204ENST00000577664 TM2D1Q9BX74 207 aa9.34□□□□□ -0.91
CDK5RAP3-204ENST00000577664 IFT22Q9H7X7 185 aa9.34□□□□□ -0.91
CDK5RAP3-204ENST00000577664 CHODLQ9H9P2 273 aa9.34□□□□□ -0.91
CDK5RAP3-204ENST00000577664 LIN7BQ9HAP6 207 aa9.34□□□□□ -0.91
CDK5RAP3-204ENST00000577664 PLGRKTQ9HBL7 147 aa9.34□□□□□ -0.91
CDK5RAP3-204ENST00000577664 SMURF1Q9HCE7 757 aa9.34□□□□□ -0.91
CDK5RAP3-204ENST00000577664 HMG20AQ9NP66 347 aa9.34□□□□□ -0.91
CDK5RAP3-204ENST00000577664 OR5V1Q9UGF6 321 aa9.34□□□□□ -0.91
CDK5RAP3-204ENST00000577664 RAB22AQ9UL26 194 aa9.34□□□□□ -0.91
CDK5RAP3-204ENST00000577664 ETV7Q9Y603 341 aa9.34□□□□□ -0.91
CDK5RAP3-204ENST00000577664 DYSFO75923 2080 aa9.34□□□□□ -0.91
CDK5RAP3-204ENST00000577664 ABCA1O95477 2261 aa9.33□□□□□ -0.92
CDK5RAP3-204ENST00000577664 FAM90A10PA6NDY2 464 aa9.33□□□□□ -0.92
CDK5RAP3-204ENST00000577664 FAM90A18PA6NE21 464 aa9.33□□□□□ -0.92
CDK5RAP3-204ENST00000577664 FAM90A16PA6NEW6 464 aa9.33□□□□□ -0.92
CDK5RAP3-204ENST00000577664 FAM90A20PA6NIJ5 464 aa9.33□□□□□ -0.92
CDK5RAP3-204ENST00000577664 FAM90A8PA6NJQ4 464 aa9.33□□□□□ -0.92
CDK5RAP3-204ENST00000577664 FAM90A7PA6NKC0 464 aa9.33□□□□□ -0.92
CDK5RAP3-204ENST00000577664 FAM90A22PA8MWA6 464 aa9.33□□□□□ -0.92
CDK5RAP3-204ENST00000577664 FAM90A12PA8MX19 464 aa9.33□□□□□ -0.92
CDK5RAP3-204ENST00000577664 FAM90A5PA8MXJ8 464 aa9.33□□□□□ -0.92
CDK5RAP3-204ENST00000577664 FAM90A23PA8MXZ1 464 aa9.33□□□□□ -0.92
CDK5RAP3-204ENST00000577664 TRAPPC2LH3BP13 241 aa9.33□□□□□ -0.92
CDK5RAP3-204ENST00000577664 TPD52L2O43399 206 aaKnown RBP9.33□□□□□ -0.92
CDK5RAP3-204ENST00000577664 IGHV4-39P01824 125 aa9.33□□□□□ -0.92
CDK5RAP3-204ENST00000577664 FAM90A15PP0C7V4 464 aa9.33□□□□□ -0.92
CDK5RAP3-204ENST00000577664 FAM90A13PP0C7W8 464 aa9.33□□□□□ -0.92
CDK5RAP3-204ENST00000577664 FAM90A14PP0C7W9 464 aa9.33□□□□□ -0.92
CDK5RAP3-204ENST00000577664 FAM90A24PP0C7X0 464 aa9.33□□□□□ -0.92
CDK5RAP3-204ENST00000577664 SLC2A2P11168 524 aaPredicted RBP9.33□□□□□ -0.92
CDK5RAP3-204ENST00000577664 GTF2F2P13984 249 aa9.33□□□□□ -0.92
CDK5RAP3-204ENST00000577664 LMO1P25800 156 aa9.33□□□□□ -0.92
CDK5RAP3-204ENST00000577664 NPBWR2P48146 333 aa9.33□□□□□ -0.92
CDK5RAP3-204ENST00000577664 PTH2RP49190 550 aa9.33□□□□□ -0.92
CDK5RAP3-204ENST00000577664 HNRNPA0Q13151 305 aaKnown RBP9.33□□□□□ -0.92
CDK5RAP3-204ENST00000577664 SPIN3Q5JUX0 258 aa9.33□□□□□ -0.92
CDK5RAP3-204ENST00000577664 HIST2H2BDQ6DRA6 164 aa9.33□□□□□ -0.92
CDK5RAP3-204ENST00000577664 AWAT2Q6E213 333 aa9.33□□□□□ -0.92
CDK5RAP3-204ENST00000577664 LINC00596Q86U02 117 aa9.33□□□□□ -0.92
CDK5RAP3-204ENST00000577664 LRRC28Q86X40 367 aaPredicted RBP9.33□□□□□ -0.92
CDK5RAP3-204ENST00000577664 OR51D1Q8NGF3 324 aa9.33□□□□□ -0.92
CDK5RAP3-204ENST00000577664 AP3S1Q92572 193 aa9.33□□□□□ -0.92
CDK5RAP3-204ENST00000577664 RFT1Q96AA3 541 aa9.33□□□□□ -0.92
CDK5RAP3-204ENST00000577664 S100A13Q99584 98 aa9.33□□□□□ -0.92
CDK5RAP3-204ENST00000577664 NUDT16L1Q9BRJ7 211 aaKnown RBP9.33□□□□□ -0.92
CDK5RAP3-204ENST00000577664 CST11Q9H112 138 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms