RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 SLC9A3R1O14745 358 aaPredicted RBP3.36□□□□□ -1.87
NUP88-213ENST00000576862 TGOLN2O43493 480 aa3.36□□□□□ -1.87
NUP88-213ENST00000576862 DPM1O60762 260 aa3.36□□□□□ -1.87
NUP88-213ENST00000576862 SHOX2O60902 331 aaPredicted RBP3.36□□□□□ -1.87
NUP88-213ENST00000576862 UGT2B17O75795 530 aa3.36□□□□□ -1.87
NUP88-213ENST00000576862 PIAS1O75925 651 aa3.36□□□□□ -1.87
NUP88-213ENST00000576862 TNFAIP8O95379 198 aa3.36□□□□□ -1.87
NUP88-213ENST00000576862 UTS2O95399 124 aa3.36□□□□□ -1.87
NUP88-213ENST00000576862 IGHG4P01861 327 aa3.36□□□□□ -1.87
NUP88-213ENST00000576862 HLA-AP01891 365 aaKnown RBP3.36□□□□□ -1.87
NUP88-213ENST00000576862 C1QAP02745 245 aa3.36□□□□□ -1.87
NUP88-213ENST00000576862 P04436 131 aa3.36□□□□□ -1.87
NUP88-213ENST00000576862 CRHP06850 196 aa3.36□□□□□ -1.87
NUP88-213ENST00000576862 RHOCP08134 193 aa3.36□□□□□ -1.87
NUP88-213ENST00000576862 NBEAP1P0C6P0 100 aa3.36□□□□□ -1.87
NUP88-213ENST00000576862 LINC00614P0C842 121 aa3.36□□□□□ -1.87
NUP88-213ENST00000576862 C8orf88P0DMB2 117 aa3.36□□□□□ -1.87
NUP88-213ENST00000576862 ZNF35P13682 527 aa3.36□□□□□ -1.87
NUP88-213ENST00000576862 GABRR1P24046 479 aa3.36□□□□□ -1.87
NUP88-213ENST00000576862 ATP5A1P25705 553 aaKnown RBP3.36□□□□□ -1.87
NUP88-213ENST00000576862 GCAP28676 217 aa3.36□□□□□ -1.87
NUP88-213ENST00000576862 FOXN2P32314 431 aa3.36□□□□□ -1.87
NUP88-213ENST00000576862 GCKP35557 465 aa3.36□□□□□ -1.87
NUP88-213ENST00000576862 NSG1P42857 185 aa3.36□□□□□ -1.87
NUP88-213ENST00000576862 PPOXP50336 477 aa3.36□□□□□ -1.87
NUP88-213ENST00000576862 UGT2B15P54855 530 aa3.36□□□□□ -1.87
NUP88-213ENST00000576862 CLDN6P56747 220 aa3.36□□□□□ -1.87
NUP88-213ENST00000576862 OR4D2P58180 307 aa3.36□□□□□ -1.87
NUP88-213ENST00000576862 C1QTNF8P60827 252 aa3.36□□□□□ -1.87
NUP88-213ENST00000576862 FLI1Q01543 452 aaPredicted RBP3.36□□□□□ -1.87
NUP88-213ENST00000576862 AESQ08117 197 aa3.36□□□□□ -1.87
NUP88-213ENST00000576862 DAZ2Q13117 558 aaKnown RBP3.36□□□□□ -1.87
NUP88-213ENST00000576862 AQP6Q13520 282 aa3.36□□□□□ -1.87
NUP88-213ENST00000576862 TPBGQ13641 420 aa3.36□□□□□ -1.87
NUP88-213ENST00000576862 SLC9A3R2Q15599 337 aa3.36□□□□□ -1.87
NUP88-213ENST00000576862 PSMD5Q16401 504 aa3.36□□□□□ -1.87
NUP88-213ENST00000576862 PGGHGQ32M88 737 aa3.36□□□□□ -1.87
NUP88-213ENST00000576862 SPIN3Q5JUX0 258 aa3.36□□□□□ -1.87
NUP88-213ENST00000576862 NPSR1Q6W5P4 371 aa3.36□□□□□ -1.87
NUP88-213ENST00000576862 LYG2Q86SG7 212 aa3.36□□□□□ -1.87
NUP88-213ENST00000576862 RIMKLAQ8IXN7 391 aa3.36□□□□□ -1.87
NUP88-213ENST00000576862 SLC35F2Q8IXU6 374 aa3.36□□□□□ -1.87
NUP88-213ENST00000576862 ZNF567Q8N184 647 aa3.36□□□□□ -1.87
NUP88-213ENST00000576862 LINC01561Q8N1V8 128 aa3.36□□□□□ -1.87
NUP88-213ENST00000576862 NATD1Q8N6N6 113 aa3.36□□□□□ -1.87
NUP88-213ENST00000576862 PXT1Q8NFP0 134 aa3.36□□□□□ -1.87
NUP88-213ENST00000576862 OR56A4Q8NGH8 313 aa3.36□□□□□ -1.87
NUP88-213ENST00000576862 OR51A7Q8NH64 312 aa3.36□□□□□ -1.87
NUP88-213ENST00000576862 PLPPR1Q8TBJ4 325 aa3.36□□□□□ -1.87
NUP88-213ENST00000576862 SPPL2BQ8TCT7 592 aa3.36□□□□□ -1.87
NUP88-213ENST00000576862 C2orf15Q8WU43 125 aaKnown RBP3.36□□□□□ -1.87
NUP88-213ENST00000576862 IL1F10Q8WWZ1 152 aa3.36□□□□□ -1.87
NUP88-213ENST00000576862 BORCS5Q969J3 196 aa3.36□□□□□ -1.87
NUP88-213ENST00000576862 CREB3L1Q96BA8 519 aa3.36□□□□□ -1.87
NUP88-213ENST00000576862 APH1AQ96BI3 265 aa3.36□□□□□ -1.87
NUP88-213ENST00000576862 DGCR14Q96DF8 476 aaKnown RBP3.36□□□□□ -1.87
NUP88-213ENST00000576862 YIPF6Q96EC8 236 aa3.36□□□□□ -1.87
NUP88-213ENST00000576862 WDR34Q96EX3 536 aa3.36□□□□□ -1.87
NUP88-213ENST00000576862 TIMD4Q96H15 378 aa3.36□□□□□ -1.87
NUP88-213ENST00000576862 CENPNQ96H22 339 aaPredicted RBP3.36□□□□□ -1.87
NUP88-213ENST00000576862 Q96MT0 163 aa3.36□□□□□ -1.87
NUP88-213ENST00000576862 SERPINB12Q96P63 405 aa3.36□□□□□ -1.87
NUP88-213ENST00000576862 SLC6A7Q99884 636 aa3.36□□□□□ -1.87
NUP88-213ENST00000576862 NIPSNAP3BQ9BS92 247 aa3.36□□□□□ -1.87
NUP88-213ENST00000576862 ZNF2Q9BSG1 426 aaPredicted RBP3.36□□□□□ -1.87
NUP88-213ENST00000576862 RNF126Q9BV68 326 aa3.36□□□□□ -1.87
NUP88-213ENST00000576862 ING2Q9H160 280 aa3.36□□□□□ -1.87
NUP88-213ENST00000576862 ALX4Q9H161 411 aaPredicted RBP3.36□□□□□ -1.87
NUP88-213ENST00000576862 PPDPFQ9H3Y8 114 aa3.36□□□□□ -1.87
NUP88-213ENST00000576862 TRABDQ9H4I3 376 aa3.36□□□□□ -1.87
NUP88-213ENST00000576862 PATZ1Q9HBE1 687 aaKnown RBP3.36□□□□□ -1.87
NUP88-213ENST00000576862 DAZ3Q9NR90 486 aaKnown RBP3.36□□□□□ -1.87
NUP88-213ENST00000576862 FBXO8Q9NRD0 319 aa3.36□□□□□ -1.87
NUP88-213ENST00000576862 FGFR1OP2Q9NVK5 253 aa3.36□□□□□ -1.87
NUP88-213ENST00000576862 VAPAQ9P0L0 249 aa3.36□□□□□ -1.87
NUP88-213ENST00000576862 OR12D3Q9UGF7 316 aa3.36□□□□□ -1.87
NUP88-213ENST00000576862 LGALS13Q9UHV8 139 aa3.36□□□□□ -1.87
NUP88-213ENST00000576862 RAB26Q9ULW5 256 aa3.36□□□□□ -1.87
NUP88-213ENST00000576862 TMCO1Q9UM00 188 aa3.36□□□□□ -1.87
NUP88-213ENST00000576862 ARL2BPQ9Y2Y0 163 aa3.36□□□□□ -1.87
NUP88-213ENST00000576862 NUBP2Q9Y5Y2 271 aa3.36□□□□□ -1.87
NUP88-213ENST00000576862 CASP8AP2Q9UKL3 1982 aa3.36□□□□□ -1.87
NUP88-213ENST00000576862 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.35□□□□□ -1.87
NUP88-213ENST00000576862 A0A1B0GV72 72 aa3.35□□□□□ -1.87
NUP88-213ENST00000576862 EXOC1LA0A1B0GW35 172 aa3.35□□□□□ -1.87
NUP88-213ENST00000576862 TCRBV9S1A1TA0A576 114 aa3.35□□□□□ -1.87
NUP88-213ENST00000576862 K7N7A8 449 aa3.35□□□□□ -1.87
NUP88-213ENST00000576862 DFFAO00273 331 aa3.35□□□□□ -1.87
NUP88-213ENST00000576862 SULT1C2O00338 296 aa3.35□□□□□ -1.87
NUP88-213ENST00000576862 RGS16O15492 202 aaPredicted RBP3.35□□□□□ -1.87
NUP88-213ENST00000576862 HPGDSO60760 199 aa3.35□□□□□ -1.87
NUP88-213ENST00000576862 RCBTB2O95199 551 aa3.35□□□□□ -1.87
NUP88-213ENST00000576862 SERPINA1P01009 418 aa3.35□□□□□ -1.87
NUP88-213ENST00000576862 IGLV3-27P01718 113 aa3.35□□□□□ -1.87
NUP88-213ENST00000576862 ISG15P05161 165 aa3.35□□□□□ -1.87
NUP88-213ENST00000576862 HBQ1P09105 142 aa3.35□□□□□ -1.87
NUP88-213ENST00000576862 TACSTD2P09758 323 aa3.35□□□□□ -1.87
NUP88-213ENST00000576862 HMGA1P17096 107 aaKnown RBP3.35□□□□□ -1.87
NUP88-213ENST00000576862 AQP1P29972 269 aa3.35□□□□□ -1.87
NUP88-213ENST00000576862 GNRHRP30968 328 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms