RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 RPS4XP62701 263 aaKnown RBP11.61□□□□□ -0.55
PCDHGB3-201ENST00000576222 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.61□□□□□ -0.55
PCDHGB3-201ENST00000576222 TBX21Q9UL17 535 aa11.61□□□□□ -0.55
PCDHGB3-201ENST00000576222 ZNF236Q9UL36 1845 aa11.61□□□□□ -0.55
PCDHGB3-201ENST00000576222 ATG2BQ96BY7 2078 aa11.61□□□□□ -0.55
PCDHGB3-201ENST00000576222 ATP6V0CP27449 155 aa11.61□□□□□ -0.55
PCDHGB3-201ENST00000576222 CCKARP32238 428 aa11.61□□□□□ -0.55
PCDHGB3-201ENST00000576222 PPP1CAP62136 330 aa11.61□□□□□ -0.55
PCDHGB3-201ENST00000576222 TLE1Q04724 770 aa11.61□□□□□ -0.55
PCDHGB3-201ENST00000576222 MPV17LQ2QL34 196 aa11.61□□□□□ -0.55
PCDHGB3-201ENST00000576222 TIGITQ495A1 244 aa11.61□□□□□ -0.55
PCDHGB3-201ENST00000576222 FBXO46Q6PJ61 603 aaPredicted RBP11.61□□□□□ -0.55
PCDHGB3-201ENST00000576222 OR2T10Q8NGZ9 312 aa11.61□□□□□ -0.55
PCDHGB3-201ENST00000576222 RNF133Q8WVZ7 376 aa11.61□□□□□ -0.55
PCDHGB3-201ENST00000576222 MCHR2Q969V1 340 aa11.61□□□□□ -0.55
PCDHGB3-201ENST00000576222 TAAR9Q96RI9 348 aa11.61□□□□□ -0.55
PCDHGB3-201ENST00000576222 GPX7Q96SL4 187 aaPredicted RBP11.61□□□□□ -0.55
PCDHGB3-201ENST00000576222 Q9N2K0 584 aa11.61□□□□□ -0.55
PCDHGB3-201ENST00000576222 MYO16Q9Y6X6 1858 aa11.61□□□□□ -0.55
PCDHGB3-201ENST00000576222 NRG2O14511 850 aaPredicted RBP11.61□□□□□ -0.55
PCDHGB3-201ENST00000576222 PDCD6O75340 191 aa11.61□□□□□ -0.55
PCDHGB3-201ENST00000576222 ACTL6AO96019 429 aa11.61□□□□□ -0.55
PCDHGB3-201ENST00000576222 MBPP02686 304 aaPredicted RBP11.61□□□□□ -0.55
PCDHGB3-201ENST00000576222 CHRNA7P36544 502 aa11.61□□□□□ -0.55
PCDHGB3-201ENST00000576222 SFTPA1Q8IWL2 248 aa11.61□□□□□ -0.55
PCDHGB3-201ENST00000576222 SLC35G3Q8N808 338 aa11.61□□□□□ -0.55
PCDHGB3-201ENST00000576222 ASB10Q8WXI3 467 aa11.61□□□□□ -0.55
PCDHGB3-201ENST00000576222 IL22RA2Q969J5 263 aa11.61□□□□□ -0.55
PCDHGB3-201ENST00000576222 RHOVQ96L33 236 aa11.61□□□□□ -0.55
PCDHGB3-201ENST00000576222 CIB3Q96Q77 187 aaPredicted RBP11.61□□□□□ -0.55
PCDHGB3-201ENST00000576222 SLC35D1Q9NTN3 355 aa11.61□□□□□ -0.55
PCDHGB3-201ENST00000576222 NRXN2Q9P2S2 1712 aa11.61□□□□□ -0.55
PCDHGB3-201ENST00000576222 NAT8Q9UHE5 227 aa11.61□□□□□ -0.55
PCDHGB3-201ENST00000576222 BOKQ9UMX3 212 aaPredicted RBP11.61□□□□□ -0.55
PCDHGB3-201ENST00000576222 DTX4Q9Y2E6 619 aa11.61□□□□□ -0.55
PCDHGB3-201ENST00000576222 POLR2AP24928 1970 aaKnown RBP11.61□□□□□ -0.55
PCDHGB3-201ENST00000576222 ZNF205O95201 554 aa11.6□□□□□ -0.55
PCDHGB3-201ENST00000576222 PNPP00491 289 aa11.6□□□□□ -0.55
PCDHGB3-201ENST00000576222 BGLAPP02818 100 aa11.6□□□□□ -0.55
PCDHGB3-201ENST00000576222 TRGC2P03986 189 aa11.6□□□□□ -0.55
PCDHGB3-201ENST00000576222 CD74P04233 296 aa11.6□□□□□ -0.55
PCDHGB3-201ENST00000576222 HOXB1P14653 301 aaPredicted RBP11.6□□□□□ -0.55
PCDHGB3-201ENST00000576222 ID4P47928 161 aa11.6□□□□□ -0.55
PCDHGB3-201ENST00000576222 HNRNPA3P51991 378 aaKnown RBP11.6□□□□□ -0.55
PCDHGB3-201ENST00000576222 CLDN15P56746 228 aa11.6□□□□□ -0.55
PCDHGB3-201ENST00000576222 C8orf44Q96CB5 159 aa11.6□□□□□ -0.55
PCDHGB3-201ENST00000576222 WDR13Q9H1Z4 485 aa11.6□□□□□ -0.55
PCDHGB3-201ENST00000576222 SLC2A9Q9NRM0 540 aa11.6□□□□□ -0.55
PCDHGB3-201ENST00000576222 MTCH1Q9NZJ7 389 aa11.6□□□□□ -0.55
PCDHGB3-201ENST00000576222 DOK5Q9P104 306 aa11.6□□□□□ -0.55
PCDHGB3-201ENST00000576222 KIAA1456Q9P272 454 aa11.6□□□□□ -0.55
PCDHGB3-201ENST00000576222 FAM186AA6NE01 2351 aa11.6□□□□□ -0.55
PCDHGB3-201ENST00000576222 C4orf47A7E2U8 309 aa11.6□□□□□ -0.55
PCDHGB3-201ENST00000576222 H3BMH7 237 aa11.6□□□□□ -0.55
PCDHGB3-201ENST00000576222 CDX1P47902 265 aaPredicted RBP11.6□□□□□ -0.55
PCDHGB3-201ENST00000576222 C21orf62-AS1Q17RA5 79 aa11.6□□□□□ -0.55
PCDHGB3-201ENST00000576222 ZNF784Q8NCA9 323 aaPredicted RBP11.6□□□□□ -0.55
PCDHGB3-201ENST00000576222 ZNF707Q96C28 371 aaPredicted RBP11.6□□□□□ -0.55
PCDHGB3-201ENST00000576222 PRSS50Q9UI38 385 aa11.6□□□□□ -0.55
PCDHGB3-201ENST00000576222 C4orf51C9J302 202 aa11.6□□□□□ -0.55
PCDHGB3-201ENST00000576222 DVL1O14640 695 aa11.6□□□□□ -0.55
PCDHGB3-201ENST00000576222 TNFSF14O43557 240 aa11.6□□□□□ -0.55
PCDHGB3-201ENST00000576222 HEXAP06865 529 aa11.6□□□□□ -0.55
PCDHGB3-201ENST00000576222 ASAH2BP0C7U1 165 aa11.6□□□□□ -0.55
PCDHGB3-201ENST00000576222 SLC25A6P12236 298 aa11.6□□□□□ -0.55
PCDHGB3-201ENST00000576222 GAS1P54826 345 aa11.6□□□□□ -0.55
PCDHGB3-201ENST00000576222 NHLH2Q02577 135 aa11.6□□□□□ -0.55
PCDHGB3-201ENST00000576222 TMEM183BQ1AE95 376 aa11.6□□□□□ -0.55
PCDHGB3-201ENST00000576222 C1orf100Q5SVJ3 147 aa11.6□□□□□ -0.55
PCDHGB3-201ENST00000576222 LINC01590Q5TEZ4 76 aa11.6□□□□□ -0.55
PCDHGB3-201ENST00000576222 PRAMEF5Q5TYX0 476 aa11.6□□□□□ -0.55
PCDHGB3-201ENST00000576222 PRAMEF6Q5VXH4 476 aa11.6□□□□□ -0.55
PCDHGB3-201ENST00000576222 ELSPBP1Q96BH3 223 aa11.6□□□□□ -0.55
PCDHGB3-201ENST00000576222 GGACTQ9BVM4 153 aa11.6□□□□□ -0.55
PCDHGB3-201ENST00000576222 FOXQ1Q9C009 403 aa11.6□□□□□ -0.55
PCDHGB3-201ENST00000576222 STRADBQ9C0K7 418 aa11.6□□□□□ -0.55
PCDHGB3-201ENST00000576222 CBY3A6NI87 242 aa11.6□□□□□ -0.55
PCDHGB3-201ENST00000576222 B4GALT1P15291 398 aa11.6□□□□□ -0.55
PCDHGB3-201ENST00000576222 DDTP30046 118 aa11.6□□□□□ -0.55
PCDHGB3-201ENST00000576222 ADPRHL1Q8NDY3 354 aa11.6□□□□□ -0.55
PCDHGB3-201ENST00000576222 OR10C1Q96KK4 312 aa11.6□□□□□ -0.55
PCDHGB3-201ENST00000576222 CTDSP1Q9GZU7 261 aa11.6□□□□□ -0.55
PCDHGB3-201ENST00000576222 ZNF831Q5JPB2 1677 aa11.59□□□□□ -0.55
PCDHGB3-201ENST00000576222 GPR3P46089 330 aa11.59□□□□□ -0.55
PCDHGB3-201ENST00000576222 GABRA2P47869 451 aa11.59□□□□□ -0.55
PCDHGB3-201ENST00000576222 P2RY4P51582 365 aa11.59□□□□□ -0.55
PCDHGB3-201ENST00000576222 RPS19BP1Q86WX3 136 aaKnown RBP11.59□□□□□ -0.55
PCDHGB3-201ENST00000576222 DICER1Q9UPY3 1922 aaKnown RBP11.59□□□□□ -0.55
PCDHGB3-201ENST00000576222 VSTM5A8MXK1 200 aa11.59□□□□□ -0.55
PCDHGB3-201ENST00000576222 CHST1O43916 411 aa11.59□□□□□ -0.55
PCDHGB3-201ENST00000576222 EML2O95834 649 aa11.59□□□□□ -0.55
PCDHGB3-201ENST00000576222 HKR1P10072 659 aa11.59□□□□□ -0.55
PCDHGB3-201ENST00000576222 INSM1Q01101 510 aaPredicted RBP11.59□□□□□ -0.55
PCDHGB3-201ENST00000576222 CLN3Q13286 438 aa11.59□□□□□ -0.55
PCDHGB3-201ENST00000576222 ZNF600Q6ZNG1 722 aa11.59□□□□□ -0.55
PCDHGB3-201ENST00000576222 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.59□□□□□ -0.55
PCDHGB3-201ENST00000576222 CYB561D1Q8N8Q1 229 aa11.59□□□□□ -0.55
PCDHGB3-201ENST00000576222 GPR61Q9BZJ8 451 aa11.59□□□□□ -0.55
PCDHGB3-201ENST00000576222 RP1L1Q8IWN7 2480 aaPredicted RBP11.59□□□□□ -0.55
PCDHGB3-201ENST00000576222 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms