RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 GINS3Q9BRX5 216 aa16.57■□□□□ 0.24
SCARF1-206ENST00000573852 ULBP2Q9BZM5 246 aa16.57■□□□□ 0.24
SCARF1-206ENST00000573852 SPACA1Q9HBV2 294 aa16.57■□□□□ 0.24
SCARF1-206ENST00000573852 C19orf25Q9UFG5 118 aaPredicted RBP16.57■□□□□ 0.24
SCARF1-206ENST00000573852 CCDC187A0A096LP49 1063 aa16.57■□□□□ 0.24
SCARF1-206ENST00000573852 C5orf52A6NGY3 159 aa16.57■□□□□ 0.24
SCARF1-206ENST00000573852 G3V3Y1 287 aa16.57■□□□□ 0.24
SCARF1-206ENST00000573852 H7C1Q1 480 aa16.57■□□□□ 0.24
SCARF1-206ENST00000573852 GPR137BO60478 399 aa16.57■□□□□ 0.24
SCARF1-206ENST00000573852 CCL7P80098 99 aa16.57■□□□□ 0.24
SCARF1-206ENST00000573852 COL19A1Q14993 1142 aa16.57■□□□□ 0.24
SCARF1-206ENST00000573852 RAET1LQ5VY80 246 aa16.57■□□□□ 0.24
SCARF1-206ENST00000573852 RBMS3Q6XE24 437 aaKnown RBP16.57■□□□□ 0.24
SCARF1-206ENST00000573852 NAXEQ8NCW5 288 aa16.57■□□□□ 0.24
SCARF1-206ENST00000573852 OR5L1Q8NGL2 311 aa16.57■□□□□ 0.24
SCARF1-206ENST00000573852 HPSE2Q8WWQ2 592 aa16.57■□□□□ 0.24
SCARF1-206ENST00000573852 SPSB1Q96BD6 273 aa16.57■□□□□ 0.24
SCARF1-206ENST00000573852 C18orf12Q96KH6 178 aa16.57■□□□□ 0.24
SCARF1-206ENST00000573852 EIF5A2Q9GZV4 153 aaKnown RBP16.57■□□□□ 0.24
SCARF1-206ENST00000573852 RGCCQ9H4X1 137 aa16.57■□□□□ 0.24
SCARF1-206ENST00000573852 IGHV5-10-1A0A0J9YXX1 117 aa16.56■□□□□ 0.24
SCARF1-206ENST00000573852 A0A1W2PPE3 182 aa16.56■□□□□ 0.24
SCARF1-206ENST00000573852 MED19A0JLT2 244 aaPredicted RBP16.56■□□□□ 0.24
SCARF1-206ENST00000573852 GLAP06280 429 aa16.56■□□□□ 0.24
SCARF1-206ENST00000573852 CRYGSP22914 178 aa16.56■□□□□ 0.24
SCARF1-206ENST00000573852 DTYMKP23919 212 aa16.56■□□□□ 0.24
SCARF1-206ENST00000573852 P2RY1P47900 373 aa16.56■□□□□ 0.24
SCARF1-206ENST00000573852 CAMLGP49069 296 aa16.56■□□□□ 0.24
SCARF1-206ENST00000573852 NHLH2Q02577 135 aa16.56■□□□□ 0.24
SCARF1-206ENST00000573852 PIGYQ3MUY2 71 aa16.56■□□□□ 0.24
SCARF1-206ENST00000573852 CDCP2Q5VXM1 449 aa16.56■□□□□ 0.24
SCARF1-206ENST00000573852 OR11L1Q8NGX0 322 aa16.56■□□□□ 0.24
SCARF1-206ENST00000573852 SLC2A9Q9NRM0 540 aa16.56■□□□□ 0.24
SCARF1-206ENST00000573852 BORCS7-ASMTA0A0B4J1R7 106 aa16.56■□□□□ 0.24
SCARF1-206ENST00000573852 GEMIN2O14893 280 aaKnown RBP16.56■□□□□ 0.24
SCARF1-206ENST00000573852 FAM27BQ5VT28 67 aa16.56■□□□□ 0.24
SCARF1-206ENST00000573852 LIAT1Q6ZQX7 453 aa16.56■□□□□ 0.24
SCARF1-206ENST00000573852 CCDC54Q8NEL0 328 aa16.56■□□□□ 0.24
SCARF1-206ENST00000573852 OR10AD1Q8NGE0 317 aa16.56■□□□□ 0.24
SCARF1-206ENST00000573852 C19orf12Q9NSK7 152 aa16.56■□□□□ 0.24
SCARF1-206ENST00000573852 LUZP4Q9P127 313 aa16.56■□□□□ 0.24
SCARF1-206ENST00000573852 A6NLC8 198 aa16.55■□□□□ 0.24
SCARF1-206ENST00000573852 M0R036 132 aa16.55■□□□□ 0.24
SCARF1-206ENST00000573852 ZIC3O60481 467 aa16.55■□□□□ 0.24
SCARF1-206ENST00000573852 EIF1BO60739 113 aaKnown RBP16.55■□□□□ 0.24
SCARF1-206ENST00000573852 ONECUT2O95948 504 aa16.55■□□□□ 0.24
SCARF1-206ENST00000573852 MT-ND4LP03901 98 aa16.55■□□□□ 0.24
SCARF1-206ENST00000573852 CCL3P10147 92 aa16.55■□□□□ 0.24
SCARF1-206ENST00000573852 EIF2S3LQ2VIR3 472 aaKnown RBP16.55■□□□□ 0.24
SCARF1-206ENST00000573852 RNF212Q495C1 297 aa16.55■□□□□ 0.24
SCARF1-206ENST00000573852 SLC22A25Q6T423 547 aa16.55■□□□□ 0.24
SCARF1-206ENST00000573852 MAML2Q8IZL2 1156 aaPredicted RBP16.55■□□□□ 0.24
SCARF1-206ENST00000573852 COMMD1Q8N668 190 aa16.55■□□□□ 0.24
SCARF1-206ENST00000573852 LRTM2Q8N967 370 aa16.55■□□□□ 0.24
SCARF1-206ENST00000573852 MSI2Q96DH6 328 aaKnown RBP16.55■□□□□ 0.24
SCARF1-206ENST00000573852 A0A087WZY1 265 aa16.55■□□□□ 0.24
SCARF1-206ENST00000573852 IGKV1-12A0A0C4DH73 117 aa16.55■□□□□ 0.24
SCARF1-206ENST00000573852 A0A1W2PPH5 198 aa16.55■□□□□ 0.24
SCARF1-206ENST00000573852 GDF9O60383 454 aa16.55■□□□□ 0.24
SCARF1-206ENST00000573852 IGKV1D-12P01611 117 aa16.55■□□□□ 0.24
SCARF1-206ENST00000573852 PCOLCEQ15113 449 aa16.55■□□□□ 0.24
SCARF1-206ENST00000573852 ZNF774Q6NX45 483 aa16.55■□□□□ 0.24
SCARF1-206ENST00000573852 NANPQ8TBE9 248 aa16.55■□□□□ 0.24
SCARF1-206ENST00000573852 SUCNR1Q9BXA5 334 aa16.55■□□□□ 0.24
SCARF1-206ENST00000573852 PROK2Q9HC23 129 aa16.55■□□□□ 0.24
SCARF1-206ENST00000573852 TERTO14746 1132 aaKnown RBP16.54■□□□□ 0.24
SCARF1-206ENST00000573852 VAMP5O95183 116 aa16.54■□□□□ 0.24
SCARF1-206ENST00000573852 AGAP20933 346 aa16.54■□□□□ 0.24
SCARF1-206ENST00000573852 NOVA1P51513 510 aaKnown RBP16.54■□□□□ 0.24
SCARF1-206ENST00000573852 IGSF11Q5DX21 431 aa16.54■□□□□ 0.24
SCARF1-206ENST00000573852 GPR157Q5UAW9 335 aa16.54■□□□□ 0.24
SCARF1-206ENST00000573852 MRPL14Q6P1L8 145 aaKnown RBP16.54■□□□□ 0.24
SCARF1-206ENST00000573852 HSD17B11Q8NBQ5 300 aa16.54■□□□□ 0.24
SCARF1-206ENST00000573852 A0A0J9YW62 118 aa16.54■□□□□ 0.24
SCARF1-206ENST00000573852 SGCEO43556 437 aa16.54■□□□□ 0.24
SCARF1-206ENST00000573852 DUSP1P28562 367 aa16.54■□□□□ 0.24
SCARF1-206ENST00000573852 RBP2P50120 134 aa16.54■□□□□ 0.24
SCARF1-206ENST00000573852 SUCLG1P53597 346 aaKnown RBP16.54■□□□□ 0.24
SCARF1-206ENST00000573852 MRPS34P82930 218 aaKnown RBP16.54■□□□□ 0.24
SCARF1-206ENST00000573852 PDCD1Q15116 288 aa16.54■□□□□ 0.24
SCARF1-206ENST00000573852 KRBOX4Q5JUW0 171 aa16.54■□□□□ 0.24
SCARF1-206ENST00000573852 FBXW12Q6X9E4 464 aa16.54■□□□□ 0.24
SCARF1-206ENST00000573852 SLC16A13Q7RTY0 426 aa16.54■□□□□ 0.24
SCARF1-206ENST00000573852 CCDC74BQ96LY2 380 aa16.54■□□□□ 0.24
SCARF1-206ENST00000573852 JSRP1Q96MG2 331 aaPredicted RBP16.54■□□□□ 0.24
SCARF1-206ENST00000573852 ANGPTL4Q9BY76 406 aa16.54■□□□□ 0.24
SCARF1-206ENST00000573852 UBE2CO00762 179 aa16.53■□□□□ 0.24
SCARF1-206ENST00000573852 TNFSF11O14788 317 aa16.53■□□□□ 0.24
SCARF1-206ENST00000573852 SYNGR3O43761 229 aa16.53■□□□□ 0.24
SCARF1-206ENST00000573852 PRH1P02810 166 aa16.53■□□□□ 0.24
SCARF1-206ENST00000573852 LIFP15018 202 aa16.53■□□□□ 0.24
SCARF1-206ENST00000573852 LMO1P25800 156 aa16.53■□□□□ 0.24
SCARF1-206ENST00000573852 ASCL4Q6XD76 172 aa16.53■□□□□ 0.24
SCARF1-206ENST00000573852 Q6ZPA2 131 aa16.53■□□□□ 0.24
SCARF1-206ENST00000573852 PPP1R3BQ86XI6 285 aa16.53■□□□□ 0.24
SCARF1-206ENST00000573852 FBXL14Q8N1E6 418 aa16.53■□□□□ 0.24
SCARF1-206ENST00000573852 ZNF561Q8N587 486 aa16.53■□□□□ 0.24
SCARF1-206ENST00000573852 LY6G6EA0A0G2JKS1 128 aa16.53■□□□□ 0.24
SCARF1-206ENST00000573852 CCDC85CA6NKD9 419 aa16.53■□□□□ 0.24
SCARF1-206ENST00000573852 S100A6P06703 90 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms