RNA–Protein interactions for RNA: ENST00000571456.1

VPS53-210, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 3

Gene VPS53, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-210ENST00000571456 KNG1P01042 644 aa17.18■□□□□ 0.34
VPS53-210ENST00000571456 WNT2P09544 360 aa17.18■□□□□ 0.34
VPS53-210ENST00000571456 FGF9P31371 208 aaPredicted RBP17.18■□□□□ 0.34
VPS53-210ENST00000571456 CD80P33681 288 aa17.18■□□□□ 0.34
VPS53-210ENST00000571456 ZP1P60852 638 aa17.18■□□□□ 0.34
VPS53-210ENST00000571456 FABP5Q01469 135 aa17.18■□□□□ 0.34
VPS53-210ENST00000571456 ESCO2Q56NI9 601 aa17.18■□□□□ 0.34
VPS53-210ENST00000571456 GLT8D1Q68CQ7 371 aa17.18■□□□□ 0.34
VPS53-210ENST00000571456 SFRP4Q6FHJ7 346 aaPredicted RBP17.18■□□□□ 0.34
VPS53-210ENST00000571456 ACP7Q6ZNF0 438 aa17.18■□□□□ 0.34
VPS53-210ENST00000571456 LINC01356Q8N9X3 169 aa17.18■□□□□ 0.34
VPS53-210ENST00000571456 OR52N4Q8NGI2 321 aa17.18■□□□□ 0.34
VPS53-210ENST00000571456 MED30Q96HR3 178 aa17.18■□□□□ 0.34
VPS53-210ENST00000571456 S100A13Q99584 98 aa17.18■□□□□ 0.34
VPS53-210ENST00000571456 NARFLQ9H6Q4 476 aa17.18■□□□□ 0.34
VPS53-210ENST00000571456 SMURF1Q9HCE7 757 aa17.18■□□□□ 0.34
VPS53-210ENST00000571456 MTCH1Q9NZJ7 389 aa17.18■□□□□ 0.34
VPS53-210ENST00000571456 STUB1Q9UNE7 303 aa17.18■□□□□ 0.34
VPS53-210ENST00000571456 GSTK1Q9Y2Q3 226 aa17.18■□□□□ 0.34
VPS53-210ENST00000571456 A0A1W2PPK0 400 aa17.17■□□□□ 0.34
VPS53-210ENST00000571456 OR2AT4A6NND4 320 aa17.17■□□□□ 0.34
VPS53-210ENST00000571456 A8MXK9 166 aa17.17■□□□□ 0.34
VPS53-210ENST00000571456 TNFRSF13BO14836 293 aaPredicted RBP17.17■□□□□ 0.34
VPS53-210ENST00000571456 WNT9BO14905 357 aa17.17■□□□□ 0.34
VPS53-210ENST00000571456 TMEM225BP0DP42 221 aa17.17■□□□□ 0.34
VPS53-210ENST00000571456 GPR176Q14439 515 aa17.17■□□□□ 0.34
VPS53-210ENST00000571456 SPIN3Q5JUX0 258 aa17.17■□□□□ 0.34
VPS53-210ENST00000571456 FAM201AQ5SY85 155 aa17.17■□□□□ 0.34
VPS53-210ENST00000571456 STUMQ69YW2 141 aa17.17■□□□□ 0.34
VPS53-210ENST00000571456 ASCL4Q6XD76 172 aa17.17■□□□□ 0.34
VPS53-210ENST00000571456 GDPGP1Q6ZNW5 385 aa17.17■□□□□ 0.34
VPS53-210ENST00000571456 SATL1Q86VE3 508 aa17.17■□□□□ 0.34
VPS53-210ENST00000571456 DEFB108BQ8NET1 73 aa17.17■□□□□ 0.34
VPS53-210ENST00000571456 IL36GQ9NZH8 169 aa17.17■□□□□ 0.34
VPS53-210ENST00000571456 GHRLQ9UBU3 117 aa17.17■□□□□ 0.34
VPS53-210ENST00000571456 GLS2Q9UI32 602 aa17.17■□□□□ 0.34
VPS53-210ENST00000571456 SSR3Q9UNL2 185 aa17.17■□□□□ 0.34
VPS53-210ENST00000571456 POLR3KQ9Y2Y1 108 aaPredicted RBP17.17■□□□□ 0.34
VPS53-210ENST00000571456 TRAV1-2A0A0B4J238 106 aa17.16■□□□□ 0.34
VPS53-210ENST00000571456 PPIAL4CA0A0B4J2A2 164 aa17.16■□□□□ 0.34
VPS53-210ENST00000571456 MAS1P04201 325 aa17.16■□□□□ 0.34
VPS53-210ENST00000571456 PTGFRP43088 359 aa17.16■□□□□ 0.34
VPS53-210ENST00000571456 MTNR1BP49286 362 aa17.16■□□□□ 0.34
VPS53-210ENST00000571456 GP2P55259 537 aaKnown RBP17.16■□□□□ 0.34
VPS53-210ENST00000571456 ELP2Q6IA86 826 aa17.16■□□□□ 0.34
VPS53-210ENST00000571456 ANGPTL6Q8NI99 470 aa17.16■□□□□ 0.34
VPS53-210ENST00000571456 TNFAIP8L1Q8WVP5 186 aa17.16■□□□□ 0.34
VPS53-210ENST00000571456 SPACA5Q96QH8 159 aa17.16■□□□□ 0.34
VPS53-210ENST00000571456 MRPS26Q9BYN8 205 aaKnown RBP17.16■□□□□ 0.34
VPS53-210ENST00000571456 SHARPINQ9H0F6 387 aa17.16■□□□□ 0.34
VPS53-210ENST00000571456 WDR13Q9H1Z4 485 aa17.16■□□□□ 0.34
VPS53-210ENST00000571456 PDCD5O14737 125 aa17.15■□□□□ 0.34
VPS53-210ENST00000571456 ADAM20O43506 726 aa17.15■□□□□ 0.34
VPS53-210ENST00000571456 ZNF205O95201 554 aa17.15■□□□□ 0.34
VPS53-210ENST00000571456 PLATP00750 562 aa17.15■□□□□ 0.34
VPS53-210ENST00000571456 IGHV4-31P0DP07 118 aa17.15■□□□□ 0.34
VPS53-210ENST00000571456 CD37P11049 281 aa17.15■□□□□ 0.34
VPS53-210ENST00000571456 GATA3P23771 443 aa17.15■□□□□ 0.34
VPS53-210ENST00000571456 MYL9P24844 172 aa17.15■□□□□ 0.34
VPS53-210ENST00000571456 PITPNBP48739 271 aa17.15■□□□□ 0.34
VPS53-210ENST00000571456 IL13RA1P78552 427 aa17.15■□□□□ 0.34
VPS53-210ENST00000571456 CD276Q5ZPR3 534 aa17.15■□□□□ 0.34
VPS53-210ENST00000571456 CRIP3Q6Q6R5 217 aa17.15■□□□□ 0.34
VPS53-210ENST00000571456 ZNF788Q6ZQV5 615 aa17.15■□□□□ 0.34
VPS53-210ENST00000571456 FAM58AQ8N1B3 248 aa17.15■□□□□ 0.34
VPS53-210ENST00000571456 JAGN1Q8N5M9 183 aa17.15■□□□□ 0.34
VPS53-210ENST00000571456 Q8NFD4 153 aa17.15■□□□□ 0.34
VPS53-210ENST00000571456 EMG1Q92979 244 aaKnown RBP17.15■□□□□ 0.34
VPS53-210ENST00000571456 SLAMF9Q96A28 289 aa17.15■□□□□ 0.34
VPS53-210ENST00000571456 SDSLQ96GA7 329 aa17.15■□□□□ 0.34
VPS53-210ENST00000571456 DMRTB1Q96MA1 342 aa17.15■□□□□ 0.34
VPS53-210ENST00000571456 SSBP3Q9BWW4 388 aaPredicted RBP17.15■□□□□ 0.34
VPS53-210ENST00000571456 METTL9Q9H1A3 318 aa17.15■□□□□ 0.34
VPS53-210ENST00000571456 CLN8Q9UBY8 286 aa17.15■□□□□ 0.34
VPS53-210ENST00000571456 TRAV20A0A0B4J274 112 aa17.14■□□□□ 0.33
VPS53-210ENST00000571456 TMPRSS2O15393 492 aa17.14■□□□□ 0.33
VPS53-210ENST00000571456 ECDO95905 644 aaPredicted RBP17.14■□□□□ 0.33
VPS53-210ENST00000571456 GYPAP02724 150 aa17.14■□□□□ 0.33
VPS53-210ENST00000571456 MSMBP08118 114 aa17.14■□□□□ 0.33
VPS53-210ENST00000571456 UBBP0CG47 229 aa17.14■□□□□ 0.33
VPS53-210ENST00000571456 PSG2P11465 335 aa17.14■□□□□ 0.33
VPS53-210ENST00000571456 CD36P16671 472 aa17.14■□□□□ 0.33
VPS53-210ENST00000571456 CALRP27797 417 aaKnown RBP17.14■□□□□ 0.33
VPS53-210ENST00000571456 DVL1P1P54792 670 aaPredicted RBP17.14■□□□□ 0.33
VPS53-210ENST00000571456 GNB2P62879 340 aa17.14■□□□□ 0.33
VPS53-210ENST00000571456 INSL4Q14641 139 aa17.14■□□□□ 0.33
VPS53-210ENST00000571456 LRRTM1Q86UE6 522 aa17.14■□□□□ 0.33
VPS53-210ENST00000571456 ZNF561Q8N587 486 aa17.14■□□□□ 0.33
VPS53-210ENST00000571456 OR5D18Q8NGL1 313 aa17.14■□□□□ 0.33
VPS53-210ENST00000571456 RFT1Q96AA3 541 aa17.14■□□□□ 0.33
VPS53-210ENST00000571456 ORAI1Q96D31 301 aa17.14■□□□□ 0.33
VPS53-210ENST00000571456 MRPS24Q96EL2 167 aaKnown RBP17.14■□□□□ 0.33
VPS53-210ENST00000571456 FAM192AQ9GZU8 254 aa17.14■□□□□ 0.33
VPS53-210ENST00000571456 HMG20AQ9NP66 347 aa17.14■□□□□ 0.33
VPS53-210ENST00000571456 ZNF222Q9UK12 451 aa17.14■□□□□ 0.33
VPS53-210ENST00000571456 IGHV3OR15-7A0A075B7D8 119 aa17.13■□□□□ 0.33
VPS53-210ENST00000571456 SIGLEC5O15389 551 aa17.13■□□□□ 0.33
VPS53-210ENST00000571456 CHRM2P08172 466 aa17.13■□□□□ 0.33
VPS53-210ENST00000571456 IL2RGP31785 369 aa17.13■□□□□ 0.33
VPS53-210ENST00000571456 CAPZA1P52907 286 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms