RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 CCDC121Q6ZUS5 278 aa10.09□□□□□ -0.79
CTDNEP1-205ENST00000570828 MKXQ8IYA7 352 aa10.09□□□□□ -0.79
CTDNEP1-205ENST00000570828 PRSS35Q8N3Z0 413 aa10.09□□□□□ -0.79
CTDNEP1-205ENST00000570828 BEND2Q8NDZ0 799 aa10.09□□□□□ -0.79
CTDNEP1-205ENST00000570828 OR4M1Q8NGD0 313 aa10.09□□□□□ -0.79
CTDNEP1-205ENST00000570828 LINC01006Q8NI28 216 aa10.09□□□□□ -0.79
CTDNEP1-205ENST00000570828 PP6455Q8WZ26 134 aa10.09□□□□□ -0.79
CTDNEP1-205ENST00000570828 C10orf35Q96D05 121 aa10.09□□□□□ -0.79
CTDNEP1-205ENST00000570828 RNFT2Q96EX2 444 aa10.09□□□□□ -0.79
CTDNEP1-205ENST00000570828 BORCS8Q96FH0 119 aa10.09□□□□□ -0.79
CTDNEP1-205ENST00000570828 HRASLS5Q96KN8 279 aa10.09□□□□□ -0.79
CTDNEP1-205ENST00000570828 CEP19Q96LK0 163 aa10.09□□□□□ -0.79
CTDNEP1-205ENST00000570828 FAM234AQ9H0X4 552 aa10.09□□□□□ -0.79
CTDNEP1-205ENST00000570828 HEXA-AS1Q9H8Q6 139 aa10.09□□□□□ -0.79
CTDNEP1-205ENST00000570828 USE1Q9NZ43 259 aa10.09□□□□□ -0.79
CTDNEP1-205ENST00000570828 DAPL1A0PJW8 107 aa10.08□□□□□ -0.8
CTDNEP1-205ENST00000570828 SNTNA6NMZ2 147 aa10.08□□□□□ -0.8
CTDNEP1-205ENST00000570828 H3BNX3 289 aa10.08□□□□□ -0.8
CTDNEP1-205ENST00000570828 TK1P04183 234 aa10.08□□□□□ -0.8
CTDNEP1-205ENST00000570828 PIPP12273 146 aaPredicted RBP10.08□□□□□ -0.8
CTDNEP1-205ENST00000570828 CCL3L1P16619 93 aa10.08□□□□□ -0.8
CTDNEP1-205ENST00000570828 COX7A1P24310 79 aa10.08□□□□□ -0.8
CTDNEP1-205ENST00000570828 TGFBR2P37173 567 aa10.08□□□□□ -0.8
CTDNEP1-205ENST00000570828 KIR3DL2P43630 455 aa10.08□□□□□ -0.8
CTDNEP1-205ENST00000570828 ALDH3A2P51648 485 aa10.08□□□□□ -0.8
CTDNEP1-205ENST00000570828 ERVFRD-1P60508 538 aa10.08□□□□□ -0.8
CTDNEP1-205ENST00000570828 ISL1P61371 349 aa10.08□□□□□ -0.8
CTDNEP1-205ENST00000570828 ERVK11-1P61568 191 aa10.08□□□□□ -0.8
CTDNEP1-205ENST00000570828 SNRPGP62308 76 aaKnown RBP10.08□□□□□ -0.8
CTDNEP1-205ENST00000570828 UBE2V2Q15819 145 aa10.08□□□□□ -0.8
CTDNEP1-205ENST00000570828 MEDAGQ5VYS4 303 aa10.08□□□□□ -0.8
CTDNEP1-205ENST00000570828 HCP5Q6MZN7 132 aa10.08□□□□□ -0.8
CTDNEP1-205ENST00000570828 Q6ZSV7 163 aa10.08□□□□□ -0.8
CTDNEP1-205ENST00000570828 SLC25A26Q70HW3 274 aa10.08□□□□□ -0.8
CTDNEP1-205ENST00000570828 ZSCAN4Q8NAM6 433 aaPredicted RBP10.08□□□□□ -0.8
CTDNEP1-205ENST00000570828 SLAMF9Q96A28 289 aa10.08□□□□□ -0.8
CTDNEP1-205ENST00000570828 CITED1Q99966 193 aa10.08□□□□□ -0.8
CTDNEP1-205ENST00000570828 IGKV1-27A0A075B6S5 117 aa10.07□□□□□ -0.8
CTDNEP1-205ENST00000570828 H3BUX3 64 aa10.07□□□□□ -0.8
CTDNEP1-205ENST00000570828 K7N7A8 449 aa10.07□□□□□ -0.8
CTDNEP1-205ENST00000570828 M0QZ24 198 aa10.07□□□□□ -0.8
CTDNEP1-205ENST00000570828 TIMM23O14925 209 aa10.07□□□□□ -0.8
CTDNEP1-205ENST00000570828 SLC16A6O15403 523 aa10.07□□□□□ -0.8
CTDNEP1-205ENST00000570828 INMTO95050 263 aa10.07□□□□□ -0.8
CTDNEP1-205ENST00000570828 CYB5AP00167 134 aa10.07□□□□□ -0.8
CTDNEP1-205ENST00000570828 CHRM2P08172 466 aa10.07□□□□□ -0.8
CTDNEP1-205ENST00000570828 OCM2P0CE71 109 aa10.07□□□□□ -0.8
CTDNEP1-205ENST00000570828 OCMP0CE72 109 aaPredicted RBP10.07□□□□□ -0.8
CTDNEP1-205ENST00000570828 ZNF20P17024 532 aa10.07□□□□□ -0.8
CTDNEP1-205ENST00000570828 RBP2P50120 134 aa10.07□□□□□ -0.8
CTDNEP1-205ENST00000570828 LGALS4P56470 323 aa10.07□□□□□ -0.8
CTDNEP1-205ENST00000570828 EDDM3BP56851 147 aa10.07□□□□□ -0.8
CTDNEP1-205ENST00000570828 PROK1P58294 105 aa10.07□□□□□ -0.8
CTDNEP1-205ENST00000570828 ACTA2P62736 377 aa10.07□□□□□ -0.8
CTDNEP1-205ENST00000570828 ACTG2P63267 376 aa10.07□□□□□ -0.8
CTDNEP1-205ENST00000570828 COL10A1Q03692 680 aa10.07□□□□□ -0.8
CTDNEP1-205ENST00000570828 ZNF273Q14593 569 aa10.07□□□□□ -0.8
CTDNEP1-205ENST00000570828 LRRC75BQ2VPJ9 315 aa10.07□□□□□ -0.8
CTDNEP1-205ENST00000570828 ZIK1Q3SY52 487 aaPredicted RBP10.07□□□□□ -0.8
CTDNEP1-205ENST00000570828 SLC25A30Q5SVS4 291 aa10.07□□□□□ -0.8
CTDNEP1-205ENST00000570828 TMEM244Q5VVB8 128 aa10.07□□□□□ -0.8
CTDNEP1-205ENST00000570828 GDPD3Q7L5L3 318 aa10.07□□□□□ -0.8
CTDNEP1-205ENST00000570828 KCTD20Q7Z5Y7 419 aa10.07□□□□□ -0.8
CTDNEP1-205ENST00000570828 Q8IYB0 196 aa10.07□□□□□ -0.8
CTDNEP1-205ENST00000570828 C10orf67Q8IYJ2 551 aa10.07□□□□□ -0.8
CTDNEP1-205ENST00000570828 RDH10Q8IZV5 341 aa10.07□□□□□ -0.8
CTDNEP1-205ENST00000570828 CBR4Q8N4T8 237 aa10.07□□□□□ -0.8
CTDNEP1-205ENST00000570828 OR2G2Q8NGZ5 317 aa10.07□□□□□ -0.8
CTDNEP1-205ENST00000570828 C17orf50Q8WW18 174 aa10.07□□□□□ -0.8
CTDNEP1-205ENST00000570828 EMG1Q92979 244 aaKnown RBP10.07□□□□□ -0.8
CTDNEP1-205ENST00000570828 UBE2FQ969M7 185 aa10.07□□□□□ -0.8
CTDNEP1-205ENST00000570828 MRPL48Q96GC5 212 aaKnown RBP10.07□□□□□ -0.8
CTDNEP1-205ENST00000570828 PPA2Q9H2U2 334 aa10.07□□□□□ -0.8
CTDNEP1-205ENST00000570828 MTCH1Q9NZJ7 389 aa10.07□□□□□ -0.8
CTDNEP1-205ENST00000570828 F8VVB4 439 aa10.06□□□□□ -0.8
CTDNEP1-205ENST00000570828 F8VWA3 439 aa10.06□□□□□ -0.8
CTDNEP1-205ENST00000570828 ZNF737O75373 536 aa10.06□□□□□ -0.8
CTDNEP1-205ENST00000570828 CLPXO76031 633 aa10.06□□□□□ -0.8
CTDNEP1-205ENST00000570828 HTR1AP08908 422 aa10.06□□□□□ -0.8
CTDNEP1-205ENST00000570828 PRKACBP22694 351 aa10.06□□□□□ -0.8
CTDNEP1-205ENST00000570828 POU3F4P49335 361 aa10.06□□□□□ -0.8
CTDNEP1-205ENST00000570828 BMXP51813 675 aa10.06□□□□□ -0.8
CTDNEP1-205ENST00000570828 ATP1B3P54709 279 aa10.06□□□□□ -0.8
CTDNEP1-205ENST00000570828 MTCP1P56278 107 aa10.06□□□□□ -0.8
CTDNEP1-205ENST00000570828 OR12D2P58182 307 aa10.06□□□□□ -0.8
CTDNEP1-205ENST00000570828 EDDM3AQ14507 147 aa10.06□□□□□ -0.8
CTDNEP1-205ENST00000570828 ZNF782Q6ZMW2 699 aaPredicted RBP10.06□□□□□ -0.8
CTDNEP1-205ENST00000570828 EGFL6Q8IUX8 553 aa10.06□□□□□ -0.8
CTDNEP1-205ENST00000570828 ENTHD1Q8IYW4 607 aa10.06□□□□□ -0.8
CTDNEP1-205ENST00000570828 OR8H2Q8N162 312 aa10.06□□□□□ -0.8
CTDNEP1-205ENST00000570828 ACBD7Q8N6N7 88 aa10.06□□□□□ -0.8
CTDNEP1-205ENST00000570828 DNAAF1Q8NEP3 725 aa10.06□□□□□ -0.8
CTDNEP1-205ENST00000570828 SPSB1Q96BD6 273 aa10.06□□□□□ -0.8
CTDNEP1-205ENST00000570828 ADAT3Q96EY9 351 aaPredicted RBP10.06□□□□□ -0.8
CTDNEP1-205ENST00000570828 MYCBPQ99417 103 aaPredicted RBP10.06□□□□□ -0.8
CTDNEP1-205ENST00000570828 SSX3Q99909 188 aa10.06□□□□□ -0.8
CTDNEP1-205ENST00000570828 C16orf95Q9H693 158 aa10.06□□□□□ -0.8
CTDNEP1-205ENST00000570828 TCF7L1Q9HCS4 588 aa10.06□□□□□ -0.8
CTDNEP1-205ENST00000570828 RAB18Q9NP72 206 aa10.06□□□□□ -0.8
CTDNEP1-205ENST00000570828 GMPPBQ9Y5P6 360 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms