RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 ZNF674Q2M3X9 581 aa13.39□□□□□ -0.27
USP43-202ENST00000570475 SLC25A47Q6Q0C1 308 aa13.39□□□□□ -0.27
USP43-202ENST00000570475 ZNF574Q6ZN55 896 aaPredicted RBP13.39□□□□□ -0.27
USP43-202ENST00000570475 ZNF441Q8N8Z8 693 aa13.39□□□□□ -0.27
USP43-202ENST00000570475 OR51H1Q8NH63 302 aa13.39□□□□□ -0.27
USP43-202ENST00000570475 CNOT1A5YKK6 2376 aaKnown RBP13.38□□□□□ -0.27
USP43-202ENST00000570475 C3orf80F5H4A9 247 aa13.38□□□□□ -0.27
USP43-202ENST00000570475 MBPP02686 304 aaPredicted RBP13.38□□□□□ -0.27
USP43-202ENST00000570475 FAM157CP0CG43 387 aa13.38□□□□□ -0.27
USP43-202ENST00000570475 SRFP11831 508 aa13.38□□□□□ -0.27
USP43-202ENST00000570475 FOSL2P15408 326 aa13.38□□□□□ -0.27
USP43-202ENST00000570475 ZNF32P17041 273 aa13.38□□□□□ -0.27
USP43-202ENST00000570475 DVL1P1P54792 670 aaPredicted RBP13.38□□□□□ -0.27
USP43-202ENST00000570475 OCSTAMPQ9BR26 566 aa13.38□□□□□ -0.27
USP43-202ENST00000570475 ZNF286AQ9HBT8 521 aa13.38□□□□□ -0.27
USP43-202ENST00000570475 CD79AP11912 226 aa13.38□□□□□ -0.27
USP43-202ENST00000570475 EDN3P14138 238 aa13.38□□□□□ -0.27
USP43-202ENST00000570475 ACKR3P25106 362 aa13.38□□□□□ -0.27
USP43-202ENST00000570475 SUMO3P55854 103 aaPredicted RBP13.38□□□□□ -0.27
USP43-202ENST00000570475 OPN5Q6U736 354 aa13.38□□□□□ -0.27
USP43-202ENST00000570475 WDSUB1Q8N9V3 476 aa13.38□□□□□ -0.27
USP43-202ENST00000570475 TAAR5O14804 337 aa13.38□□□□□ -0.27
USP43-202ENST00000570475 ATXN7O15265 892 aaPredicted RBP13.38□□□□□ -0.27
USP43-202ENST00000570475 FGF16O43320 207 aa13.38□□□□□ -0.27
USP43-202ENST00000570475 PTAFRP25105 342 aa13.38□□□□□ -0.27
USP43-202ENST00000570475 EIF1P41567 113 aaKnown RBP13.38□□□□□ -0.27
USP43-202ENST00000570475 CARD18P57730 90 aa13.38□□□□□ -0.27
USP43-202ENST00000570475 RPS19BP1Q86WX3 136 aaKnown RBP13.38□□□□□ -0.27
USP43-202ENST00000570475 TCEAL3Q969E4 200 aa13.38□□□□□ -0.27
USP43-202ENST00000570475 SGCZQ96LD1 299 aa13.38□□□□□ -0.27
USP43-202ENST00000570475 AQP10Q96PS8 301 aa13.38□□□□□ -0.27
USP43-202ENST00000570475 OSGIN2Q9Y236 505 aa13.38□□□□□ -0.27
USP43-202ENST00000570475 MTCH2Q9Y6C9 303 aa13.38□□□□□ -0.27
USP43-202ENST00000570475 NSG1A0A0A6YYJ2 146 aa13.37□□□□□ -0.27
USP43-202ENST00000570475 HSPA12AO43301 675 aa13.37□□□□□ -0.27
USP43-202ENST00000570475 HLA-GP17693 338 aa13.37□□□□□ -0.27
USP43-202ENST00000570475 NAAAQ02083 359 aa13.37□□□□□ -0.27
USP43-202ENST00000570475 CEACAM16Q2WEN9 425 aa13.37□□□□□ -0.27
USP43-202ENST00000570475 RABEPKQ7Z6M1 372 aa13.37□□□□□ -0.27
USP43-202ENST00000570475 HAS2Q92819 552 aa13.37□□□□□ -0.27
USP43-202ENST00000570475 PBDC1Q9BVG4 233 aa13.37□□□□□ -0.27
USP43-202ENST00000570475 IFT22Q9H7X7 185 aa13.37□□□□□ -0.27
USP43-202ENST00000570475 FAM86C1Q9NVL1 165 aa13.37□□□□□ -0.27
USP43-202ENST00000570475 KPTNQ9Y664 436 aa13.37□□□□□ -0.27
USP43-202ENST00000570475 EP300Q09472 2414 aaPredicted RBP13.37□□□□□ -0.27
USP43-202ENST00000570475 E5RGE8 158 aa13.37□□□□□ -0.27
USP43-202ENST00000570475 CCL4P13236 92 aa13.37□□□□□ -0.27
USP43-202ENST00000570475 THBS4P35443 961 aa13.37□□□□□ -0.27
USP43-202ENST00000570475 PPP1CCP36873 323 aaKnown RBP13.37□□□□□ -0.27
USP43-202ENST00000570475 HOXA1P49639 335 aaPredicted RBP13.37□□□□□ -0.27
USP43-202ENST00000570475 NDUFA6P56556 154 aa13.37□□□□□ -0.27
USP43-202ENST00000570475 TMEM123Q8N131 208 aa13.37□□□□□ -0.27
USP43-202ENST00000570475 SLC2A9Q9NRM0 540 aa13.37□□□□□ -0.27
USP43-202ENST00000570475 C19orf12Q9NSK7 152 aa13.37□□□□□ -0.27
USP43-202ENST00000570475 NSG2Q9Y328 171 aa13.37□□□□□ -0.27
USP43-202ENST00000570475 HDGFL3Q9Y3E1 203 aa13.37□□□□□ -0.27
USP43-202ENST00000570475 TRAV39A0A0B4J263 110 aa13.36□□□□□ -0.27
USP43-202ENST00000570475 ZNF727A8MUV8 499 aa13.36□□□□□ -0.27
USP43-202ENST00000570475 F8VVB4 439 aa13.36□□□□□ -0.27
USP43-202ENST00000570475 F8VWA3 439 aa13.36□□□□□ -0.27
USP43-202ENST00000570475 HS3ST1O14792 307 aa13.36□□□□□ -0.27
USP43-202ENST00000570475 P04436 131 aa13.36□□□□□ -0.27
USP43-202ENST00000570475 CXCL12P48061 93 aa13.36□□□□□ -0.27
USP43-202ENST00000570475 ARL6IP1Q15041 203 aa13.36□□□□□ -0.27
USP43-202ENST00000570475 MST1LQ2TV78 715 aa13.36□□□□□ -0.27
USP43-202ENST00000570475 IGSF11Q5DX21 431 aa13.36□□□□□ -0.27
USP43-202ENST00000570475 LGI3Q8N145 548 aa13.36□□□□□ -0.27
USP43-202ENST00000570475 SLC25A43Q8WUT9 341 aaPredicted RBP13.36□□□□□ -0.27
USP43-202ENST00000570475 PP6455Q8WZ26 134 aa13.36□□□□□ -0.27
USP43-202ENST00000570475 RARRES2Q99969 163 aa13.36□□□□□ -0.27
USP43-202ENST00000570475 CCDC187A0A096LP49 1063 aa13.36□□□□□ -0.27
USP43-202ENST00000570475 AQP7P3A6NL99 342 aa13.36□□□□□ -0.27
USP43-202ENST00000570475 DBX1A6NMT0 343 aa13.36□□□□□ -0.27
USP43-202ENST00000570475 RBMXL2O75526 392 aaKnown RBP13.36□□□□□ -0.27
USP43-202ENST00000570475 TUBG1P23258 451 aa13.36□□□□□ -0.27
USP43-202ENST00000570475 CNN3Q15417 329 aaKnown RBP13.36□□□□□ -0.27
USP43-202ENST00000570475 C4orf17Q53FE4 359 aa13.36□□□□□ -0.27
USP43-202ENST00000570475 WIPI1Q5MNZ9 446 aaPredicted RBP13.36□□□□□ -0.27
USP43-202ENST00000570475 OIT3Q8WWZ8 545 aa13.36□□□□□ -0.27
USP43-202ENST00000570475 RDH5Q92781 318 aa13.36□□□□□ -0.27
USP43-202ENST00000570475 SAT2Q96F10 170 aaPredicted RBP13.36□□□□□ -0.27
USP43-202ENST00000570475 C1orf147Q96MC9 270 aaPredicted RBP13.36□□□□□ -0.27
USP43-202ENST00000570475 DNAJB11Q9UBS4 358 aa13.36□□□□□ -0.27
USP43-202ENST00000570475 TRBV23-1A0A0A0MS06 115 aa13.36□□□□□ -0.27
USP43-202ENST00000570475 A0A1W2PQM1 296 aa13.36□□□□□ -0.27
USP43-202ENST00000570475 HLA-HP01893 362 aa13.36□□□□□ -0.27
USP43-202ENST00000570475 FBP1P09467 338 aa13.36□□□□□ -0.27
USP43-202ENST00000570475 GSK3AP49840 483 aa13.36□□□□□ -0.27
USP43-202ENST00000570475 SSR4P51571 173 aa13.36□□□□□ -0.27
USP43-202ENST00000570475 DHRS7BQ6IAN0 325 aaPredicted RBP13.36□□□□□ -0.27
USP43-202ENST00000570475 OR5T1Q8NG75 326 aa13.36□□□□□ -0.27
USP43-202ENST00000570475 UCK1Q9HA47 277 aa13.36□□□□□ -0.27
USP43-202ENST00000570475 FRYLO94915 3013 aa13.36□□□□□ -0.27
USP43-202ENST00000570475 ROS1P08922 2347 aa13.36□□□□□ -0.27
USP43-202ENST00000570475 A0A0J9YW62 118 aa13.35□□□□□ -0.27
USP43-202ENST00000570475 GDF1P27539 372 aa13.35□□□□□ -0.27
USP43-202ENST00000570475 RUNX1Q01196 453 aa13.35□□□□□ -0.27
USP43-202ENST00000570475 CLEC12BQ2HXU8 276 aa13.35□□□□□ -0.27
USP43-202ENST00000570475 DTX1Q86Y01 620 aa13.35□□□□□ -0.27
USP43-202ENST00000570475 NFAM1Q8NET5 270 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms