RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 FIP1L1Q6UN15 594 aaKnown RBP16.61■□□□□ 0.25
CLK3-225ENST00000569063 Q8IYB0 196 aa16.61■□□□□ 0.25
CLK3-225ENST00000569063 ZNF676Q8N7Q3 588 aa16.61■□□□□ 0.25
CLK3-225ENST00000569063 OR51A4Q8NGJ6 313 aa16.61■□□□□ 0.25
CLK3-225ENST00000569063 OR10AC1Q8NH08 325 aa16.61■□□□□ 0.25
CLK3-225ENST00000569063 SEBOXQ9HB31 216 aaPredicted RBP16.61■□□□□ 0.25
CLK3-225ENST00000569063 POM121CA8CG34 1229 aa16.6■□□□□ 0.25
CLK3-225ENST00000569063 H0YAE9 185 aa16.6■□□□□ 0.25
CLK3-225ENST00000569063 IGHV4-59P01825 116 aa16.6■□□□□ 0.25
CLK3-225ENST00000569063 CHRM2P08172 466 aa16.6■□□□□ 0.25
CLK3-225ENST00000569063 FBP1P09467 338 aa16.6■□□□□ 0.25
CLK3-225ENST00000569063 AZGP1P25311 298 aaKnown RBP16.6■□□□□ 0.25
CLK3-225ENST00000569063 RPL15P61313 204 aaKnown RBP16.6■□□□□ 0.25
CLK3-225ENST00000569063 COL10A1Q03692 680 aa16.6■□□□□ 0.25
CLK3-225ENST00000569063 ACSM1Q08AH1 577 aa16.6■□□□□ 0.25
CLK3-225ENST00000569063 LHFPL2Q6ZUX7 228 aa16.6■□□□□ 0.25
CLK3-225ENST00000569063 MKXQ8IYA7 352 aa16.6■□□□□ 0.25
CLK3-225ENST00000569063 OR13C3Q8NGS6 347 aa16.6■□□□□ 0.25
CLK3-225ENST00000569063 HAVCR2Q8TDQ0 301 aa16.6■□□□□ 0.25
CLK3-225ENST00000569063 DYRK2Q92630 601 aa16.6■□□□□ 0.25
CLK3-225ENST00000569063 TAF15Q92804 592 aaKnown RBP eCLIP16.6■□□□□ 0.25
CLK3-225ENST00000569063 JAM3Q9BX67 310 aa16.6■□□□□ 0.25
CLK3-225ENST00000569063 DPAGT1Q9H3H5 408 aa16.6■□□□□ 0.25
CLK3-225ENST00000569063 C8orf4Q9NR00 106 aa16.6■□□□□ 0.25
CLK3-225ENST00000569063 TMEM212A6NML5 194 aa16.59■□□□□ 0.25
CLK3-225ENST00000569063 ZNF737O75373 536 aa16.59■□□□□ 0.25
CLK3-225ENST00000569063 MT-ND2P03891 347 aa16.59■□□□□ 0.25
CLK3-225ENST00000569063 CRYBA1P05813 215 aa16.59■□□□□ 0.25
CLK3-225ENST00000569063 SMN1Q16637 294 aaKnown RBP16.59■□□□□ 0.25
CLK3-225ENST00000569063 ZNF691Q5VV52 312 aa16.59■□□□□ 0.25
CLK3-225ENST00000569063 HCP5Q6MZN7 132 aa16.59■□□□□ 0.25
CLK3-225ENST00000569063 SHISA2Q6UWI4 295 aa16.59■□□□□ 0.25
CLK3-225ENST00000569063 C11orf42Q8N5U0 333 aa16.59■□□□□ 0.25
CLK3-225ENST00000569063 PACRGLQ8N7B6 248 aa16.59■□□□□ 0.25
CLK3-225ENST00000569063 OR4M1Q8NGD0 313 aa16.59■□□□□ 0.25
CLK3-225ENST00000569063 SGMS2Q8NHU3 365 aa16.59■□□□□ 0.25
CLK3-225ENST00000569063 OPALINQ96PE5 141 aa16.59■□□□□ 0.25
CLK3-225ENST00000569063 FGF20Q9NP95 211 aaPredicted RBP16.59■□□□□ 0.25
CLK3-225ENST00000569063 ZNRD1Q9P1U0 126 aa16.59■□□□□ 0.25
CLK3-225ENST00000569063 SF3B6Q9Y3B4 125 aaKnown RBP16.59■□□□□ 0.25
CLK3-225ENST00000569063 MMP24Q9Y5R2 645 aa16.59■□□□□ 0.25
CLK3-225ENST00000569063 A0A1W2PRD5 423 aa16.58■□□□□ 0.24
CLK3-225ENST00000569063 A0A1W2PRF3 423 aa16.58■□□□□ 0.24
CLK3-225ENST00000569063 A0A1W2PRM7 423 aa16.58■□□□□ 0.24
CLK3-225ENST00000569063 E9PI62 339 aa16.58■□□□□ 0.24
CLK3-225ENST00000569063 INMTO95050 263 aa16.58■□□□□ 0.24
CLK3-225ENST00000569063 ZFPL1O95159 310 aa16.58■□□□□ 0.24
CLK3-225ENST00000569063 CYB5AP00167 134 aa16.58■□□□□ 0.24
CLK3-225ENST00000569063 LIMS3P0CW19 117 aa16.58■□□□□ 0.24
CLK3-225ENST00000569063 LIMS4P0CW20 117 aa16.58■□□□□ 0.24
CLK3-225ENST00000569063 SAA4P35542 130 aa16.58■□□□□ 0.24
CLK3-225ENST00000569063 GBX2P52951 348 aaPredicted RBP16.58■□□□□ 0.24
CLK3-225ENST00000569063 PDZK1IP1Q13113 114 aa16.58■□□□□ 0.24
CLK3-225ENST00000569063 LRRC36Q1X8D7 754 aa16.58■□□□□ 0.24
CLK3-225ENST00000569063 PNKDQ8N490 385 aa16.58■□□□□ 0.24
CLK3-225ENST00000569063 ASCC1Q8N9N2 400 aaKnown RBP16.58■□□□□ 0.24
CLK3-225ENST00000569063 C1RLQ9NZP8 487 aa16.58■□□□□ 0.24
CLK3-225ENST00000569063 TRBV2A0A0J9YWF9 115 aa16.57■□□□□ 0.24
CLK3-225ENST00000569063 hCG_1809904A0A1W2PP81 198 aa16.57■□□□□ 0.24
CLK3-225ENST00000569063 A0A1W2PPE2 198 aa16.57■□□□□ 0.24
CLK3-225ENST00000569063 A0A1W2PR64 198 aa16.57■□□□□ 0.24
CLK3-225ENST00000569063 A0A1W2PRV1 198 aa16.57■□□□□ 0.24
CLK3-225ENST00000569063 MEIOCA2RUB1 952 aa16.57■□□□□ 0.24
CLK3-225ENST00000569063 ALX3O95076 343 aa16.57■□□□□ 0.24
CLK3-225ENST00000569063 NDUFA7O95182 113 aa16.57■□□□□ 0.24
CLK3-225ENST00000569063 CCDC159P0C7I6 412 aa16.57■□□□□ 0.24
CLK3-225ENST00000569063 MDKP21741 143 aaPredicted RBP16.57■□□□□ 0.24
CLK3-225ENST00000569063 OMGP23515 440 aa16.57■□□□□ 0.24
CLK3-225ENST00000569063 NPBWR2P48146 333 aa16.57■□□□□ 0.24
CLK3-225ENST00000569063 MIDNQ504T8 468 aa16.57■□□□□ 0.24
CLK3-225ENST00000569063 TTC23Q5W5X9 447 aa16.57■□□□□ 0.24
CLK3-225ENST00000569063 PARP16Q8N5Y8 322 aa16.57■□□□□ 0.24
CLK3-225ENST00000569063 OR5AK2Q8NH90 309 aa16.57■□□□□ 0.24
CLK3-225ENST00000569063 EMG1Q92979 244 aaKnown RBP16.57■□□□□ 0.24
CLK3-225ENST00000569063 SNX22Q96L94 193 aa16.57■□□□□ 0.24
CLK3-225ENST00000569063 COMMD4Q9H0A8 199 aa16.57■□□□□ 0.24
CLK3-225ENST00000569063 ZCCHC4Q9H5U6 513 aa16.57■□□□□ 0.24
CLK3-225ENST00000569063 RBFOX1Q9NWB1 397 aaKnown RBP16.57■□□□□ 0.24
CLK3-225ENST00000569063 A0A1B0GUS0 222 aa16.56■□□□□ 0.24
CLK3-225ENST00000569063 CLIC3O95833 236 aa16.56■□□□□ 0.24
CLK3-225ENST00000569063 OCM2P0CE71 109 aa16.56■□□□□ 0.24
CLK3-225ENST00000569063 OCMP0CE72 109 aaPredicted RBP16.56■□□□□ 0.24
CLK3-225ENST00000569063 CCL3L1P16619 93 aa16.56■□□□□ 0.24
CLK3-225ENST00000569063 BCL3P20749 454 aa16.56■□□□□ 0.24
CLK3-225ENST00000569063 DCKP27707 260 aa16.56■□□□□ 0.24
CLK3-225ENST00000569063 POU3F4P49335 361 aa16.56■□□□□ 0.24
CLK3-225ENST00000569063 RELBQ01201 579 aa16.56■□□□□ 0.24
CLK3-225ENST00000569063 ZNF273Q14593 569 aa16.56■□□□□ 0.24
CLK3-225ENST00000569063 ZNF146Q15072 292 aa16.56■□□□□ 0.24
CLK3-225ENST00000569063 RCN1Q15293 331 aa16.56■□□□□ 0.24
CLK3-225ENST00000569063 SPIN3Q5JUX0 258 aa16.56■□□□□ 0.24
CLK3-225ENST00000569063 SERPINA12Q8IW75 414 aa16.56■□□□□ 0.24
CLK3-225ENST00000569063 OR8H2Q8N162 312 aa16.56■□□□□ 0.24
CLK3-225ENST00000569063 FAM58AQ8N1B3 248 aa16.56■□□□□ 0.24
CLK3-225ENST00000569063 OR5D14Q8NGL3 314 aa16.56■□□□□ 0.24
CLK3-225ENST00000569063 OR13C9Q8NGT0 318 aa16.56■□□□□ 0.24
CLK3-225ENST00000569063 OR4F5Q8NH21 305 aa16.56■□□□□ 0.24
CLK3-225ENST00000569063 CNIH3Q8TBE1 160 aa16.56■□□□□ 0.24
CLK3-225ENST00000569063 PDCD1LG2Q9BQ51 273 aa16.56■□□□□ 0.24
CLK3-225ENST00000569063 HEXA-AS1Q9H8Q6 139 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms