RNA–Protein interactions for RNA: ENST00000569036.2

CDH3-208, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-208ENST00000569036 OR1E2P47887 323 aa9.07□□□□□ -0.96
CDH3-208ENST00000569036 HOXA4Q00056 320 aaPredicted RBP9.07□□□□□ -0.96
CDH3-208ENST00000569036 IL18Q14116 193 aa9.07□□□□□ -0.96
CDH3-208ENST00000569036 GRK1Q15835 563 aa9.07□□□□□ -0.96
CDH3-208ENST00000569036 LRRC75BQ2VPJ9 315 aa9.07□□□□□ -0.96
CDH3-208ENST00000569036 GPR139Q6DWJ6 353 aa9.07□□□□□ -0.96
CDH3-208ENST00000569036 FAM122CQ6P4D5 195 aa9.07□□□□□ -0.96
CDH3-208ENST00000569036 ARL9Q6T311 187 aa9.07□□□□□ -0.96
CDH3-208ENST00000569036 ZNF836Q6ZNA1 936 aa9.07□□□□□ -0.96
CDH3-208ENST00000569036 LIAT1Q6ZQX7 453 aa9.07□□□□□ -0.96
CDH3-208ENST00000569036 RASSF6Q6ZTQ3 369 aa9.07□□□□□ -0.96
CDH3-208ENST00000569036 GID4Q8IVV7 300 aa9.07□□□□□ -0.96
CDH3-208ENST00000569036 MRPL41Q8IXM3 137 aaKnown RBP9.07□□□□□ -0.96
CDH3-208ENST00000569036 OR52P1PQ8NH57 321 aa9.07□□□□□ -0.96
CDH3-208ENST00000569036 LHFPL5Q8TAF8 219 aa9.07□□□□□ -0.96
CDH3-208ENST00000569036 GNPDA2Q8TDQ7 276 aa9.07□□□□□ -0.96
CDH3-208ENST00000569036 ZNF431Q8TF32 576 aaPredicted RBP9.07□□□□□ -0.96
CDH3-208ENST00000569036 ASB13Q8WXK3 278 aa9.07□□□□□ -0.96
CDH3-208ENST00000569036 IL4I1Q96RQ9 567 aa9.07□□□□□ -0.96
CDH3-208ENST00000569036 MCRIP2Q9BUT9 160 aaKnown RBP9.07□□□□□ -0.96
CDH3-208ENST00000569036 MEGF9Q9H1U4 602 aa9.07□□□□□ -0.96
CDH3-208ENST00000569036 ELOVL3Q9HB03 270 aa9.07□□□□□ -0.96
CDH3-208ENST00000569036 KRCC1Q9NPI7 259 aaPredicted RBP9.07□□□□□ -0.96
CDH3-208ENST00000569036 ONECUT1Q9UBC0 465 aa9.07□□□□□ -0.96
CDH3-208ENST00000569036 UBQLN2Q9UHD9 624 aa9.07□□□□□ -0.96
CDH3-208ENST00000569036 CLEC2DQ9UHP7 191 aa9.07□□□□□ -0.96
CDH3-208ENST00000569036 SCP2D1Q9UJQ7 156 aa9.07□□□□□ -0.96
CDH3-208ENST00000569036 HIF3AQ9Y2N7 669 aa9.07□□□□□ -0.96
CDH3-208ENST00000569036 TMA7Q9Y2S6 64 aaKnown RBP9.07□□□□□ -0.96
CDH3-208ENST00000569036 TSSC4Q9Y5U2 329 aaPredicted RBP9.07□□□□□ -0.96
CDH3-208ENST00000569036 KMT2AQ03164 3969 aa9.06□□□□□ -0.96
CDH3-208ENST00000569036 A0A1B0GW55 424 aa9.06□□□□□ -0.96
CDH3-208ENST00000569036 HMGN4O00479 90 aa9.06□□□□□ -0.96
CDH3-208ENST00000569036 FFAR1O14842 300 aa9.06□□□□□ -0.96
CDH3-208ENST00000569036 CTDSPLO15194 276 aa9.06□□□□□ -0.96
CDH3-208ENST00000569036 ADAM20O43506 726 aa9.06□□□□□ -0.96
CDH3-208ENST00000569036 OR7A10O76100 309 aa9.06□□□□□ -0.96
CDH3-208ENST00000569036 HMGN1P05114 100 aa9.06□□□□□ -0.96
CDH3-208ENST00000569036 QDPRP09417 244 aa9.06□□□□□ -0.96
CDH3-208ENST00000569036 DUX4L2P0CJ85 424 aa9.06□□□□□ -0.96
CDH3-208ENST00000569036 DUX4L3P0CJ86 424 aa9.06□□□□□ -0.96
CDH3-208ENST00000569036 DUX4L5P0CJ88 424 aa9.06□□□□□ -0.96
CDH3-208ENST00000569036 DUX4L6P0CJ89 424 aa9.06□□□□□ -0.96
CDH3-208ENST00000569036 DUX4L7P0CJ90 424 aa9.06□□□□□ -0.96
CDH3-208ENST00000569036 SRP9P49458 86 aaKnown RBP9.06□□□□□ -0.96
CDH3-208ENST00000569036 ETV1P50549 477 aa9.06□□□□□ -0.96
CDH3-208ENST00000569036 RPS25P62851 125 aaKnown RBP9.06□□□□□ -0.96
CDH3-208ENST00000569036 TSPAN31Q12999 210 aa9.06□□□□□ -0.96
CDH3-208ENST00000569036 DYRK1AQ13627 763 aa9.06□□□□□ -0.96
CDH3-208ENST00000569036 GINS1Q14691 196 aa9.06□□□□□ -0.96
CDH3-208ENST00000569036 TMEM95Q3KNT9 176 aa9.06□□□□□ -0.96
CDH3-208ENST00000569036 DUX4L9Q6RFH8 374 aaPredicted RBP9.06□□□□□ -0.96
CDH3-208ENST00000569036 C5orf46Q6UWT4 87 aa9.06□□□□□ -0.96
CDH3-208ENST00000569036 ETV3LQ6ZN32 361 aa9.06□□□□□ -0.96
CDH3-208ENST00000569036 PXKQ7Z7A4 578 aa9.06□□□□□ -0.96
CDH3-208ENST00000569036 OAFQ86UD1 273 aa9.06□□□□□ -0.96
CDH3-208ENST00000569036 NPEPL1Q8NDH3 523 aa9.06□□□□□ -0.96
CDH3-208ENST00000569036 ZNF680Q8NEM1 530 aa9.06□□□□□ -0.96
CDH3-208ENST00000569036 OR5AU1Q8NGC0 362 aa9.06□□□□□ -0.96
CDH3-208ENST00000569036 OR4M1Q8NGD0 313 aa9.06□□□□□ -0.96
CDH3-208ENST00000569036 OR8H1Q8NGG4 311 aa9.06□□□□□ -0.96
CDH3-208ENST00000569036 OR51G2Q8NGK0 314 aa9.06□□□□□ -0.96
CDH3-208ENST00000569036 OR6X1Q8NH79 312 aa9.06□□□□□ -0.96
CDH3-208ENST00000569036 CMBLQ96DG6 245 aa9.06□□□□□ -0.96
CDH3-208ENST00000569036 RNFT2Q96EX2 444 aa9.06□□□□□ -0.96
CDH3-208ENST00000569036 TMEM19Q96HH6 336 aa9.06□□□□□ -0.96
CDH3-208ENST00000569036 C4orf45Q96LM5 186 aa9.06□□□□□ -0.96
CDH3-208ENST00000569036 FNDC11Q9BVV2 318 aa9.06□□□□□ -0.96
CDH3-208ENST00000569036 GHITMQ9H3K2 345 aa9.06□□□□□ -0.96
CDH3-208ENST00000569036 FN3KQ9H479 309 aa9.06□□□□□ -0.96
CDH3-208ENST00000569036 EVA1AQ9H8M9 152 aa9.06□□□□□ -0.96
CDH3-208ENST00000569036 MTHFD2LQ9H903 347 aaPredicted RBP9.06□□□□□ -0.96
CDH3-208ENST00000569036 EDA2RQ9HAV5 297 aa9.06□□□□□ -0.96
CDH3-208ENST00000569036 IL20Q9NYY1 176 aa9.06□□□□□ -0.96
CDH3-208ENST00000569036 CALML5Q9NZT1 146 aa9.06□□□□□ -0.96
CDH3-208ENST00000569036 NLKQ9UBE8 527 aa9.06□□□□□ -0.96
CDH3-208ENST00000569036 DUX4Q9UBX2 424 aa9.06□□□□□ -0.96
CDH3-208ENST00000569036 CHST2Q9Y4C5 530 aa9.06□□□□□ -0.96
CDH3-208ENST00000569036 SESN1Q9Y6P5 492 aa9.06□□□□□ -0.96
CDH3-208ENST00000569036 MEIKINA0A087WXM9 373 aa9.05□□□□□ -0.96
CDH3-208ENST00000569036 TCRBV4S1A1TA0A5B7 111 aa9.05□□□□□ -0.96
CDH3-208ENST00000569036 NAP1L6A6NFF2 107 aa9.05□□□□□ -0.96
CDH3-208ENST00000569036 J3KTA2 159 aa9.05□□□□□ -0.96
CDH3-208ENST00000569036 GSTZ1O43708 216 aaPredicted RBP9.05□□□□□ -0.96
CDH3-208ENST00000569036 SYNGR1O43759 233 aa9.05□□□□□ -0.96
CDH3-208ENST00000569036 C1QCP02747 245 aa9.05□□□□□ -0.96
CDH3-208ENST00000569036 BGLAPP02818 100 aa9.05□□□□□ -0.96
CDH3-208ENST00000569036 RRASP10301 218 aa9.05□□□□□ -0.96
CDH3-208ENST00000569036 TNFRSF1BP20333 461 aa9.05□□□□□ -0.96
CDH3-208ENST00000569036 HTR1FP30939 366 aa9.05□□□□□ -0.96
CDH3-208ENST00000569036 HOXC5Q00444 222 aa9.05□□□□□ -0.96
CDH3-208ENST00000569036 PSG4Q00888 419 aa9.05□□□□□ -0.96
CDH3-208ENST00000569036 DHODHQ02127 395 aa9.05□□□□□ -0.96
CDH3-208ENST00000569036 SNAPC1Q16533 368 aa9.05□□□□□ -0.96
CDH3-208ENST00000569036 ZNF57Q68EA5 555 aaPredicted RBP9.05□□□□□ -0.96
CDH3-208ENST00000569036 OR5AS1Q8N127 324 aa9.05□□□□□ -0.96
CDH3-208ENST00000569036 GPR32P1Q8NGA4 272 aa9.05□□□□□ -0.96
CDH3-208ENST00000569036 C15orf40Q8WUR7 153 aa9.05□□□□□ -0.96
CDH3-208ENST00000569036 SLC38A5Q8WUX1 472 aa9.05□□□□□ -0.96
CDH3-208ENST00000569036 ERMAPQ96PL5 475 aaPredicted RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms