RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 ATP1B3P54709 279 aa24.03■■□□□ 1.44
RAB40C-211ENST00000568586 KLRD1Q13241 179 aa24.03■■□□□ 1.44
RAB40C-211ENST00000568586 KLHL22Q53GT1 634 aa24.03■■□□□ 1.44
RAB40C-211ENST00000568586 FIP1L1Q6UN15 594 aaKnown RBP24.03■■□□□ 1.44
RAB40C-211ENST00000568586 SHISA2Q6UWI4 295 aa24.03■■□□□ 1.44
RAB40C-211ENST00000568586 Q8IYB0 196 aa24.03■■□□□ 1.44
RAB40C-211ENST00000568586 FAM185AQ8N0U4 392 aa24.03■■□□□ 1.44
RAB40C-211ENST00000568586 OR51A4Q8NGJ6 313 aa24.03■■□□□ 1.44
RAB40C-211ENST00000568586 OR52I1Q8NGK6 324 aa24.03■■□□□ 1.44
RAB40C-211ENST00000568586 DYRK2Q92630 601 aa24.03■■□□□ 1.44
RAB40C-211ENST00000568586 FAM96BQ9Y3D0 163 aa24.03■■□□□ 1.44
RAB40C-211ENST00000568586 TRRAPQ9Y4A5 3859 aa24.03■■□□□ 1.44
RAB40C-211ENST00000568586 A0A1W2PPH5 198 aa24.02■■□□□ 1.44
RAB40C-211ENST00000568586 NDUFA7O95182 113 aa24.02■■□□□ 1.44
RAB40C-211ENST00000568586 IGHV4-59P01825 116 aa24.02■■□□□ 1.44
RAB40C-211ENST00000568586 CHRM2P08172 466 aa24.02■■□□□ 1.44
RAB40C-211ENST00000568586 PRB3Q04118 309 aaPredicted RBP24.02■■□□□ 1.44
RAB40C-211ENST00000568586 BATF2Q8N1L9 274 aa24.02■■□□□ 1.44
RAB40C-211ENST00000568586 SGMS2Q8NHU3 365 aa24.02■■□□□ 1.44
RAB40C-211ENST00000568586 SLAMF9Q96A28 289 aa24.02■■□□□ 1.44
RAB40C-211ENST00000568586 FGF20Q9NP95 211 aaPredicted RBP24.02■■□□□ 1.44
RAB40C-211ENST00000568586 C8orf4Q9NR00 106 aa24.02■■□□□ 1.44
RAB40C-211ENST00000568586 ZNRD1Q9P1U0 126 aa24.02■■□□□ 1.44
RAB40C-211ENST00000568586 OR14J1Q9UGF5 321 aa24.02■■□□□ 1.44
RAB40C-211ENST00000568586 A0A1B0GUS0 222 aa24.01■■□□□ 1.43
RAB40C-211ENST00000568586 ZNF20P17024 532 aa24.01■■□□□ 1.43
RAB40C-211ENST00000568586 AZGP1P25311 298 aaKnown RBP24.01■■□□□ 1.43
RAB40C-211ENST00000568586 LHFPL2Q6ZUX7 228 aa24.01■■□□□ 1.43
RAB40C-211ENST00000568586 MKXQ8IYA7 352 aa24.01■■□□□ 1.43
RAB40C-211ENST00000568586 ZNF555Q8NEP9 628 aa24.01■■□□□ 1.43
RAB40C-211ENST00000568586 HAVCR2Q8TDQ0 301 aa24.01■■□□□ 1.43
RAB40C-211ENST00000568586 TAF15Q92804 592 aaKnown RBP eCLIP24.01■■□□□ 1.43
RAB40C-211ENST00000568586 DPAGT1Q9H3H5 408 aa24.01■■□□□ 1.43
RAB40C-211ENST00000568586 C1RLQ9NZP8 487 aa24.01■■□□□ 1.43
RAB40C-211ENST00000568586 SF3B6Q9Y3B4 125 aaKnown RBP24.01■■□□□ 1.43
RAB40C-211ENST00000568586 H0YAE9 185 aa24■■□□□ 1.43
RAB40C-211ENST00000568586 ALX3O95076 343 aa24■■□□□ 1.43
RAB40C-211ENST00000568586 SAA4P35542 130 aa24■■□□□ 1.43
RAB40C-211ENST00000568586 MTCP1P56278 107 aa24■■□□□ 1.43
RAB40C-211ENST00000568586 RELBQ01201 579 aa24■■□□□ 1.43
RAB40C-211ENST00000568586 COL10A1Q03692 680 aa24■■□□□ 1.43
RAB40C-211ENST00000568586 PACRGLQ8N7B6 248 aa24■■□□□ 1.43
RAB40C-211ENST00000568586 ZNF676Q8N7Q3 588 aa24■■□□□ 1.43
RAB40C-211ENST00000568586 SLITRK2Q9H156 845 aa24■■□□□ 1.43
RAB40C-211ENST00000568586 TNFRSF19Q9NS68 423 aa24■■□□□ 1.43
RAB40C-211ENST00000568586 TRBV2A0A0J9YWF9 115 aa23.99■■□□□ 1.43
RAB40C-211ENST00000568586 TMEM212A6NML5 194 aa23.99■■□□□ 1.43
RAB40C-211ENST00000568586 E9PI62 339 aa23.99■■□□□ 1.43
RAB40C-211ENST00000568586 ZFPL1O95159 310 aa23.99■■□□□ 1.43
RAB40C-211ENST00000568586 LIMS3P0CW19 117 aa23.99■■□□□ 1.43
RAB40C-211ENST00000568586 LIMS4P0CW20 117 aa23.99■■□□□ 1.43
RAB40C-211ENST00000568586 MDKP21741 143 aaPredicted RBP23.99■■□□□ 1.43
RAB40C-211ENST00000568586 PDZK1IP1Q13113 114 aa23.99■■□□□ 1.43
RAB40C-211ENST00000568586 MIDNQ504T8 468 aa23.99■■□□□ 1.43
RAB40C-211ENST00000568586 PNKDQ8N490 385 aa23.99■■□□□ 1.43
RAB40C-211ENST00000568586 OR13C3Q8NGS6 347 aa23.99■■□□□ 1.43
RAB40C-211ENST00000568586 OPALINQ96PE5 141 aa23.99■■□□□ 1.43
RAB40C-211ENST00000568586 CRYBA1P05813 215 aa23.98■■□□□ 1.43
RAB40C-211ENST00000568586 NPBWR2P48146 333 aa23.98■■□□□ 1.43
RAB40C-211ENST00000568586 DLX6P56179 175 aa23.98■■□□□ 1.43
RAB40C-211ENST00000568586 ZNF146Q15072 292 aa23.98■■□□□ 1.43
RAB40C-211ENST00000568586 SMN1Q16637 294 aaKnown RBP23.98■■□□□ 1.43
RAB40C-211ENST00000568586 ZNF691Q5VV52 312 aa23.98■■□□□ 1.43
RAB40C-211ENST00000568586 CRIP3Q6Q6R5 217 aa23.98■■□□□ 1.43
RAB40C-211ENST00000568586 OR4M1Q8NGD0 313 aa23.98■■□□□ 1.43
RAB40C-211ENST00000568586 OR4F5Q8NH21 305 aa23.98■■□□□ 1.43
RAB40C-211ENST00000568586 AJUBAQ96IF1 538 aa23.98■■□□□ 1.43
RAB40C-211ENST00000568586 SNX22Q96L94 193 aa23.98■■□□□ 1.43
RAB40C-211ENST00000568586 MEIOCA2RUB1 952 aa23.97■■□□□ 1.43
RAB40C-211ENST00000568586 GPR137BO60478 399 aa23.97■■□□□ 1.43
RAB40C-211ENST00000568586 CCDC159P0C7I6 412 aa23.97■■□□□ 1.43
RAB40C-211ENST00000568586 TAF9Q16594 264 aa23.97■■□□□ 1.43
RAB40C-211ENST00000568586 OR8H2Q8N162 312 aa23.97■■□□□ 1.43
RAB40C-211ENST00000568586 PARP16Q8N5Y8 322 aa23.97■■□□□ 1.43
RAB40C-211ENST00000568586 ZCCHC4Q9H5U6 513 aa23.97■■□□□ 1.43
RAB40C-211ENST00000568586 HEXA-AS1Q9H8Q6 139 aa23.97■■□□□ 1.43
RAB40C-211ENST00000568586 hCG_1809904A0A1W2PP81 198 aa23.96■■□□□ 1.43
RAB40C-211ENST00000568586 A0A1W2PPE2 198 aa23.96■■□□□ 1.43
RAB40C-211ENST00000568586 A0A1W2PR64 198 aa23.96■■□□□ 1.43
RAB40C-211ENST00000568586 A0A1W2PRD5 423 aa23.96■■□□□ 1.43
RAB40C-211ENST00000568586 A0A1W2PRF3 423 aa23.96■■□□□ 1.43
RAB40C-211ENST00000568586 A0A1W2PRM7 423 aa23.96■■□□□ 1.43
RAB40C-211ENST00000568586 A0A1W2PRV1 198 aa23.96■■□□□ 1.43
RAB40C-211ENST00000568586 TMEM82A0PJX8 343 aa23.96■■□□□ 1.43
RAB40C-211ENST00000568586 C17orf98A8MV24 154 aa23.96■■□□□ 1.43
RAB40C-211ENST00000568586 CYB5AP00167 134 aa23.96■■□□□ 1.43
RAB40C-211ENST00000568586 OMGP23515 440 aa23.96■■□□□ 1.43
RAB40C-211ENST00000568586 DCKP27707 260 aa23.96■■□□□ 1.43
RAB40C-211ENST00000568586 GBX2P52951 348 aaPredicted RBP23.96■■□□□ 1.43
RAB40C-211ENST00000568586 RAG2P55895 527 aa23.96■■□□□ 1.43
RAB40C-211ENST00000568586 ZNF273Q14593 569 aa23.96■■□□□ 1.43
RAB40C-211ENST00000568586 TTC23Q5W5X9 447 aa23.96■■□□□ 1.43
RAB40C-211ENST00000568586 C17orf107Q6ZR85 190 aa23.96■■□□□ 1.43
RAB40C-211ENST00000568586 FAM58AQ8N1B3 248 aa23.96■■□□□ 1.43
RAB40C-211ENST00000568586 ASCC1Q8N9N2 400 aaKnown RBP23.96■■□□□ 1.43
RAB40C-211ENST00000568586 BEND2Q8NDZ0 799 aa23.96■■□□□ 1.43
RAB40C-211ENST00000568586 EMG1Q92979 244 aaKnown RBP23.96■■□□□ 1.43
RAB40C-211ENST00000568586 BEX1Q9HBH7 125 aa23.96■■□□□ 1.43
RAB40C-211ENST00000568586 RBFOX1Q9NWB1 397 aaKnown RBP23.96■■□□□ 1.43
RAB40C-211ENST00000568586 RBP4P02753 201 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms