RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 HOXA4Q00056 320 aaPredicted RBP10.15□□□□□ -0.78
SF3B3-208ENST00000567250 SYT6Q5T7P8 510 aaPredicted RBP10.15□□□□□ -0.78
SF3B3-208ENST00000567250 ATPAF1Q5TC12 328 aaPredicted RBP10.15□□□□□ -0.78
SF3B3-208ENST00000567250 CD276Q5ZPR3 534 aa10.15□□□□□ -0.78
SF3B3-208ENST00000567250 GLT8D1Q68CQ7 371 aa10.15□□□□□ -0.78
SF3B3-208ENST00000567250 LYPD2Q6UXB3 125 aa10.15□□□□□ -0.78
SF3B3-208ENST00000567250 ZNF788Q6ZQV5 615 aa10.15□□□□□ -0.78
SF3B3-208ENST00000567250 FAM58AQ8N1B3 248 aa10.15□□□□□ -0.78
SF3B3-208ENST00000567250 ZNF561Q8N587 486 aa10.15□□□□□ -0.78
SF3B3-208ENST00000567250 JAGN1Q8N5M9 183 aa10.15□□□□□ -0.78
SF3B3-208ENST00000567250 TEX29Q8N6K0 151 aa10.15□□□□□ -0.78
SF3B3-208ENST00000567250 OR4M2Q8NGB6 313 aa10.15□□□□□ -0.78
SF3B3-208ENST00000567250 ANGPTL6Q8NI99 470 aa10.15□□□□□ -0.78
SF3B3-208ENST00000567250 MUL1Q969V5 352 aa10.15□□□□□ -0.78
SF3B3-208ENST00000567250 FOXRED1Q96CU9 486 aaPredicted RBP10.15□□□□□ -0.78
SF3B3-208ENST00000567250 KCTD12Q96CX2 325 aaKnown RBP10.15□□□□□ -0.78
SF3B3-208ENST00000567250 ORAI1Q96D31 301 aa10.15□□□□□ -0.78
SF3B3-208ENST00000567250 ZNF488Q96MN9 340 aa10.15□□□□□ -0.78
SF3B3-208ENST00000567250 SMR3AQ99954 134 aa10.15□□□□□ -0.78
SF3B3-208ENST00000567250 ELL3Q9HB65 397 aaPredicted RBP10.15□□□□□ -0.78
SF3B3-208ENST00000567250 LPAR2Q9HBW0 351 aa10.15□□□□□ -0.78
SF3B3-208ENST00000567250 YAE1D1Q9NRH1 226 aa10.15□□□□□ -0.78
SF3B3-208ENST00000567250 SF3B6Q9Y3B4 125 aaKnown RBP10.15□□□□□ -0.78
SF3B3-208ENST00000567250 ABCA1O95477 2261 aa10.15□□□□□ -0.78
SF3B3-208ENST00000567250 TRDV1A0A1B0GX56 115 aa10.14□□□□□ -0.79
SF3B3-208ENST00000567250 DVL1O14640 695 aa10.14□□□□□ -0.79
SF3B3-208ENST00000567250 SIGLEC5O15389 551 aa10.14□□□□□ -0.79
SF3B3-208ENST00000567250 PIN1P1O15428 100 aa10.14□□□□□ -0.79
SF3B3-208ENST00000567250 ANGPTL7O43827 346 aa10.14□□□□□ -0.79
SF3B3-208ENST00000567250 INMTO95050 263 aa10.14□□□□□ -0.79
SF3B3-208ENST00000567250 PSG2P11465 335 aa10.14□□□□□ -0.79
SF3B3-208ENST00000567250 PRKACAP17612 351 aa10.14□□□□□ -0.79
SF3B3-208ENST00000567250 SRMP19623 302 aa10.14□□□□□ -0.79
SF3B3-208ENST00000567250 BCL3P20749 454 aa10.14□□□□□ -0.79
SF3B3-208ENST00000567250 HNF1AP20823 631 aa10.14□□□□□ -0.79
SF3B3-208ENST00000567250 PTGFRP43088 359 aa10.14□□□□□ -0.79
SF3B3-208ENST00000567250 SEC61A1P61619 476 aaKnown RBP10.14□□□□□ -0.79
SF3B3-208ENST00000567250 LCN2P80188 198 aa10.14□□□□□ -0.79
SF3B3-208ENST00000567250 FABP5Q01469 135 aa10.14□□□□□ -0.79
SF3B3-208ENST00000567250 GPR176Q14439 515 aa10.14□□□□□ -0.79
SF3B3-208ENST00000567250 INSL4Q14641 139 aa10.14□□□□□ -0.79
SF3B3-208ENST00000567250 RSU1Q15404 277 aa10.14□□□□□ -0.79
SF3B3-208ENST00000567250 TIMM50Q3ZCQ8 353 aa10.14□□□□□ -0.79
SF3B3-208ENST00000567250 DCAF12L2Q5VW00 463 aa10.14□□□□□ -0.79
SF3B3-208ENST00000567250 WDR25Q64LD2 544 aaPredicted RBP10.14□□□□□ -0.79
SF3B3-208ENST00000567250 CD200R1LQ6Q8B3 271 aa10.14□□□□□ -0.79
SF3B3-208ENST00000567250 BTNL3Q6UXE8 466 aa10.14□□□□□ -0.79
SF3B3-208ENST00000567250 OR5T2Q8NGG2 359 aa10.14□□□□□ -0.79
SF3B3-208ENST00000567250 ST8SIA4Q92187 359 aa10.14□□□□□ -0.79
SF3B3-208ENST00000567250 SEH1LQ96EE3 360 aa10.14□□□□□ -0.79
SF3B3-208ENST00000567250 SDSLQ96GA7 329 aa10.14□□□□□ -0.79
SF3B3-208ENST00000567250 GAFA1Q96PS6 74 aa10.14□□□□□ -0.79
SF3B3-208ENST00000567250 CCL13Q99616 98 aa10.14□□□□□ -0.79
SF3B3-208ENST00000567250 UQCC2Q9BRT2 126 aa10.14□□□□□ -0.79
SF3B3-208ENST00000567250 METTL9Q9H1A3 318 aa10.14□□□□□ -0.79
SF3B3-208ENST00000567250 RBFOX1Q9NWB1 397 aaKnown RBP10.14□□□□□ -0.79
SF3B3-208ENST00000567250 HIF1ANQ9NWT6 349 aa10.14□□□□□ -0.79
SF3B3-208ENST00000567250 TMEM160Q9NX00 188 aa10.14□□□□□ -0.79
SF3B3-208ENST00000567250 CTSZQ9UBR2 303 aa10.14□□□□□ -0.79
SF3B3-208ENST00000567250 OR14J1Q9UGF5 321 aa10.14□□□□□ -0.79
SF3B3-208ENST00000567250 ZNF222Q9UK12 451 aa10.14□□□□□ -0.79
SF3B3-208ENST00000567250 STUB1Q9UNE7 303 aa10.14□□□□□ -0.79
SF3B3-208ENST00000567250 POLR3KQ9Y2Y1 108 aaPredicted RBP10.14□□□□□ -0.79
SF3B3-208ENST00000567250 TLN2Q9Y4G6 2542 aa10.13□□□□□ -0.79
SF3B3-208ENST00000567250 IGKV1D-17A0A075B6S4 117 aa10.13□□□□□ -0.79
SF3B3-208ENST00000567250 MAGEA13PA6NCF6 341 aa10.13□□□□□ -0.79
SF3B3-208ENST00000567250 RFPL4AA6NLU0 287 aa10.13□□□□□ -0.79
SF3B3-208ENST00000567250 RFPL4AL1F8VTS6 287 aa10.13□□□□□ -0.79
SF3B3-208ENST00000567250 J3QLI3 93 aa10.13□□□□□ -0.79
SF3B3-208ENST00000567250 TNFRSF13BO14836 293 aaPredicted RBP10.13□□□□□ -0.79
SF3B3-208ENST00000567250 PHF1O43189 567 aaPredicted RBP10.13□□□□□ -0.79
SF3B3-208ENST00000567250 ENSAO43768 121 aaKnown RBP10.13□□□□□ -0.79
SF3B3-208ENST00000567250 ECDO95905 644 aaPredicted RBP10.13□□□□□ -0.79
SF3B3-208ENST00000567250 CSTBP04080 98 aaKnown RBP10.13□□□□□ -0.79
SF3B3-208ENST00000567250 CHRM2P08172 466 aa10.13□□□□□ -0.79
SF3B3-208ENST00000567250 CALRP27797 417 aaKnown RBP10.13□□□□□ -0.79
SF3B3-208ENST00000567250 OR3A4PP47883 348 aa10.13□□□□□ -0.79
SF3B3-208ENST00000567250 CAV3P56539 151 aa10.13□□□□□ -0.79
SF3B3-208ENST00000567250 FGF12P61328 243 aa10.13□□□□□ -0.79
SF3B3-208ENST00000567250 IKZF1Q13422 519 aa10.13□□□□□ -0.79
SF3B3-208ENST00000567250 FAM27D1Q5T7N8 215 aa10.13□□□□□ -0.79
SF3B3-208ENST00000567250 AWAT2Q6E213 333 aa10.13□□□□□ -0.79
SF3B3-208ENST00000567250 CRIP3Q6Q6R5 217 aa10.13□□□□□ -0.79
SF3B3-208ENST00000567250 TMEM91Q6ZNR0 172 aa10.13□□□□□ -0.79
SF3B3-208ENST00000567250 BATF2Q8N1L9 274 aa10.13□□□□□ -0.79
SF3B3-208ENST00000567250 FAM216BQ8N7L0 139 aa10.13□□□□□ -0.79
SF3B3-208ENST00000567250 TMEM185AQ8NFB2 350 aa10.13□□□□□ -0.79
SF3B3-208ENST00000567250 PPP1R35Q8TAP8 253 aa10.13□□□□□ -0.79
SF3B3-208ENST00000567250 FAM234AQ9H0X4 552 aa10.13□□□□□ -0.79
SF3B3-208ENST00000567250 GSX1Q9H4S2 264 aaPredicted RBP10.13□□□□□ -0.79
SF3B3-208ENST00000567250 HMG20AQ9NP66 347 aa10.13□□□□□ -0.79
SF3B3-208ENST00000567250 EXOSC4Q9NPD3 245 aaKnown RBP10.13□□□□□ -0.79
SF3B3-208ENST00000567250 IL36GQ9NZH8 169 aa10.13□□□□□ -0.79
SF3B3-208ENST00000567250 SLC25A10Q9UBX3 287 aaPredicted RBP10.13□□□□□ -0.79
SF3B3-208ENST00000567250 SSR3Q9UNL2 185 aa10.13□□□□□ -0.79
SF3B3-208ENST00000567250 GSTK1Q9Y2Q3 226 aa10.13□□□□□ -0.79
SF3B3-208ENST00000567250 MRPS28Q9Y2Q9 187 aaKnown RBP10.13□□□□□ -0.79
SF3B3-208ENST00000567250 MALRD1Q5VYJ5 2156 aa10.13□□□□□ -0.79
SF3B3-208ENST00000567250 HIVEP2P31629 2446 aa10.12□□□□□ -0.79
SF3B3-208ENST00000567250 IGHV2-70DA0A0C4DH43 119 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms