RNA–Protein interactions for RNA: ENST00000567212.5

UBFD1-207, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UBFD1, Length 4,727 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-207ENST00000567212 MRPL54Q6P161 138 aaKnown RBP11.85□□□□□ -0.51
UBFD1-207ENST00000567212 FAHD2BQ6P2I3 314 aaPredicted RBP11.85□□□□□ -0.51
UBFD1-207ENST00000567212 ZNF573Q86YE8 665 aa11.85□□□□□ -0.51
UBFD1-207ENST00000567212 PLXDC1Q8IUK5 500 aa11.85□□□□□ -0.51
UBFD1-207ENST00000567212 FAHD2AQ96GK7 314 aa11.85□□□□□ -0.51
UBFD1-207ENST00000567212 CCNL2Q96S94 520 aaPredicted RBP11.85□□□□□ -0.51
UBFD1-207ENST00000567212 ALX4Q9H161 411 aaPredicted RBP11.85□□□□□ -0.51
UBFD1-207ENST00000567212 MOB1AQ9H8S9 216 aa11.85□□□□□ -0.51
UBFD1-207ENST00000567212 MRPS18AQ9NVS2 196 aaKnown RBP11.85□□□□□ -0.51
UBFD1-207ENST00000567212 KLK13Q9UKR3 277 aa11.85□□□□□ -0.51
UBFD1-207ENST00000567212 XIRP1Q702N8 1843 aaKnown RBP11.84□□□□□ -0.51
UBFD1-207ENST00000567212 SHISA8B8ZZ34 492 aa11.84□□□□□ -0.51
UBFD1-207ENST00000567212 CNN1P51911 297 aaKnown RBP11.84□□□□□ -0.51
UBFD1-207ENST00000567212 LDLRAD1Q5T700 205 aa11.84□□□□□ -0.51
UBFD1-207ENST00000567212 C1QL3Q5VWW1 255 aa11.84□□□□□ -0.51
UBFD1-207ENST00000567212 CBLN3Q6UW01 205 aa11.84□□□□□ -0.51
UBFD1-207ENST00000567212 C16orf82Q7Z2V1 217 aa11.84□□□□□ -0.51
UBFD1-207ENST00000567212 OR2AE1Q8NHA4 323 aa11.84□□□□□ -0.51
UBFD1-207ENST00000567212 ZPLD1Q8TCW7 415 aa11.84□□□□□ -0.51
UBFD1-207ENST00000567212 ADAMTSL1Q8N6G6 1762 aa11.84□□□□□ -0.51
UBFD1-207ENST00000567212 WISP3O95389 354 aaPredicted RBP11.84□□□□□ -0.51
UBFD1-207ENST00000567212 SEC11BP0C7V7 166 aa11.84□□□□□ -0.51
UBFD1-207ENST00000567212 DCAF7P61962 342 aa11.84□□□□□ -0.51
UBFD1-207ENST00000567212 PPP2CBP62714 309 aa11.84□□□□□ -0.51
UBFD1-207ENST00000567212 PPP2CAP67775 309 aa11.84□□□□□ -0.51
UBFD1-207ENST00000567212 IL13RA2Q14627 380 aa11.84□□□□□ -0.51
UBFD1-207ENST00000567212 HLA-DRB5Q30154 266 aa11.84□□□□□ -0.51
UBFD1-207ENST00000567212 SPNS3Q6ZMD2 512 aa11.84□□□□□ -0.51
UBFD1-207ENST00000567212 PRSS41Q7RTY9 318 aa11.84□□□□□ -0.51
UBFD1-207ENST00000567212 ZNRF4Q8WWF5 429 aa11.84□□□□□ -0.51
UBFD1-207ENST00000567212 ANKRD10Q9NXR5 420 aa11.84□□□□□ -0.51
UBFD1-207ENST00000567212 RARRES3Q9UL19 164 aa11.84□□□□□ -0.51
UBFD1-207ENST00000567212 ATG2BQ96BY7 2078 aa11.84□□□□□ -0.51
UBFD1-207ENST00000567212 KIAA1551Q9HCM1 1747 aa11.84□□□□□ -0.51
UBFD1-207ENST00000567212 SIRPB1O00241 398 aa11.84□□□□□ -0.51
UBFD1-207ENST00000567212 CIDEAO60543 219 aa11.84□□□□□ -0.51
UBFD1-207ENST00000567212 MRPL33O75394 65 aaKnown RBP11.84□□□□□ -0.51
UBFD1-207ENST00000567212 SNRPCP09234 159 aaKnown RBP11.84□□□□□ -0.51
UBFD1-207ENST00000567212 GLB1P16278 677 aa11.84□□□□□ -0.51
UBFD1-207ENST00000567212 EWSR1Q01844 656 aaKnown RBP eCLIP11.84□□□□□ -0.51
UBFD1-207ENST00000567212 GABRA6Q16445 453 aa11.84□□□□□ -0.51
UBFD1-207ENST00000567212 NPEPL1Q8NDH3 523 aa11.84□□□□□ -0.51
UBFD1-207ENST00000567212 OR10G4Q8NGN3 311 aa11.84□□□□□ -0.51
UBFD1-207ENST00000567212 OR10G9Q8NGN4 311 aa11.84□□□□□ -0.51
UBFD1-207ENST00000567212 OR10G7Q8NGN6 311 aa11.84□□□□□ -0.51
UBFD1-207ENST00000567212 NEIL1Q96FI4 390 aaPredicted RBP11.84□□□□□ -0.51
UBFD1-207ENST00000567212 DNAJC4Q9NNZ3 241 aa11.84□□□□□ -0.51
UBFD1-207ENST00000567212 CACNG5Q9UF02 275 aa11.84□□□□□ -0.51
UBFD1-207ENST00000567212 PAPPAQ13219 1627 aa11.84□□□□□ -0.51
UBFD1-207ENST00000567212 SHANK3Q9BYB0 1731 aa11.84□□□□□ -0.51
UBFD1-207ENST00000567212 CENPVL1A0A0U1RR11 272 aa11.84□□□□□ -0.51
UBFD1-207ENST00000567212 MCM3APO60318 1980 aa11.84□□□□□ -0.51
UBFD1-207ENST00000567212 PGA3P0DJD8 388 aa11.84□□□□□ -0.51
UBFD1-207ENST00000567212 HOXB1P14653 301 aaPredicted RBP11.84□□□□□ -0.51
UBFD1-207ENST00000567212 HSD17B7P56937 341 aa11.84□□□□□ -0.51
UBFD1-207ENST00000567212 NHLH1Q02575 133 aa11.84□□□□□ -0.51
UBFD1-207ENST00000567212 ATOH7Q8N100 152 aa11.84□□□□□ -0.51
UBFD1-207ENST00000567212 OR5D13Q8NGL4 314 aa11.84□□□□□ -0.51
UBFD1-207ENST00000567212 RAB24Q969Q5 203 aa11.84□□□□□ -0.51
UBFD1-207ENST00000567212 DICER1Q9UPY3 1922 aaKnown RBP11.84□□□□□ -0.51
UBFD1-207ENST00000567212 C3orf85A0A1B0GTC6 90 aa11.83□□□□□ -0.52
UBFD1-207ENST00000567212 M0R2Z0 102 aa11.83□□□□□ -0.52
UBFD1-207ENST00000567212 OR5G3P0C626 314 aa11.83□□□□□ -0.52
UBFD1-207ENST00000567212 FAM3AP98173 230 aa11.83□□□□□ -0.52
UBFD1-207ENST00000567212 SLC38A11Q08AI6 406 aa11.83□□□□□ -0.52
UBFD1-207ENST00000567212 ADAMTSL4Q6UY14 1074 aa11.83□□□□□ -0.52
UBFD1-207ENST00000567212 LYRM4Q9HD34 91 aa11.83□□□□□ -0.52
UBFD1-207ENST00000567212 DHRS7CA6NNS2 312 aa11.83□□□□□ -0.52
UBFD1-207ENST00000567212 CDC14BO60729 498 aa11.83□□□□□ -0.52
UBFD1-207ENST00000567212 PCBD1P61457 104 aa11.83□□□□□ -0.52
UBFD1-207ENST00000567212 SLC39A11Q8N1S5 342 aa11.83□□□□□ -0.52
UBFD1-207ENST00000567212 SGMS2Q8NHU3 365 aa11.83□□□□□ -0.52
UBFD1-207ENST00000567212 TSPAN32Q96QS1 320 aa11.83□□□□□ -0.52
UBFD1-207ENST00000567212 TMEM204Q9BSN7 226 aa11.83□□□□□ -0.52
UBFD1-207ENST00000567212 HEXA-AS1Q9H8Q6 139 aa11.83□□□□□ -0.52
UBFD1-207ENST00000567212 KCNK7Q9Y2U2 307 aa11.83□□□□□ -0.52
UBFD1-207ENST00000567212 DBX1A6NMT0 343 aa11.83□□□□□ -0.52
UBFD1-207ENST00000567212 ZNF207O43670 478 aaKnown RBP11.83□□□□□ -0.52
UBFD1-207ENST00000567212 PAGE4O60829 102 aa11.83□□□□□ -0.52
UBFD1-207ENST00000567212 HERPUD1Q15011 391 aa11.83□□□□□ -0.52
UBFD1-207ENST00000567212 WDR13Q9H1Z4 485 aa11.83□□□□□ -0.52
UBFD1-207ENST00000567212 SLC45A1Q9Y2W3 748 aa11.83□□□□□ -0.52
UBFD1-207ENST00000567212 MRPS18BQ9Y676 258 aaKnown RBP11.83□□□□□ -0.52
UBFD1-207ENST00000567212 CENPFP49454 3210 aa11.83□□□□□ -0.52
UBFD1-207ENST00000567212 EP300Q09472 2414 aaPredicted RBP11.83□□□□□ -0.52
UBFD1-207ENST00000567212 KIR2DS5A0A0G2JLQ3 304 aa11.82□□□□□ -0.52
UBFD1-207ENST00000567212 A0A0G2JNG1 304 aa11.82□□□□□ -0.52
UBFD1-207ENST00000567212 MSGN1A6NI15 193 aa11.82□□□□□ -0.52
UBFD1-207ENST00000567212 SNURFLB1AK76 121 aa11.82□□□□□ -0.52
UBFD1-207ENST00000567212 B4DEV8 164 aa11.82□□□□□ -0.52
UBFD1-207ENST00000567212 KIR2DS3K7RE56 304 aa11.82□□□□□ -0.52
UBFD1-207ENST00000567212 CD99P14209 185 aa11.82□□□□□ -0.52
UBFD1-207ENST00000567212 PPICP45877 212 aa11.82□□□□□ -0.52
UBFD1-207ENST00000567212 KIR2DS5Q14953 304 aa11.82□□□□□ -0.52
UBFD1-207ENST00000567212 KIR3DX1Q9H7L2 352 aa11.82□□□□□ -0.52
UBFD1-207ENST00000567212 ZNF665Q9H7R5 613 aa11.82□□□□□ -0.52
UBFD1-207ENST00000567212 FLRT3Q9NZU0 649 aa11.82□□□□□ -0.52
UBFD1-207ENST00000567212 ERRFI1Q9UJM3 462 aaPredicted RBP11.82□□□□□ -0.52
UBFD1-207ENST00000567212 ESPL1Q14674 2120 aa11.82□□□□□ -0.52
UBFD1-207ENST00000567212 IGHV3-15A0A0B4J1V0 119 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms