RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 OR7C1O76099 320 aaPredicted RBP16.16■□□□□ 0.18
MSLN-207ENST00000566549 NGFP01138 241 aa16.16■□□□□ 0.18
MSLN-207ENST00000566549 FXYD4P59646 89 aa16.16■□□□□ 0.18
MSLN-207ENST00000566549 ASCL4Q6XD76 172 aa16.16■□□□□ 0.18
MSLN-207ENST00000566549 SUN5Q8TC36 379 aa16.16■□□□□ 0.18
MSLN-207ENST00000566549 SPSB4Q96A44 273 aa16.16■□□□□ 0.18
MSLN-207ENST00000566549 OR5AC2Q9NZP5 309 aa16.16■□□□□ 0.18
MSLN-207ENST00000566549 PRSS50Q9UI38 385 aa16.16■□□□□ 0.18
MSLN-207ENST00000566549 KLF13Q9Y2Y9 288 aaPredicted RBP16.16■□□□□ 0.18
MSLN-207ENST00000566549 CACNA1HO95180 2353 aa16.15■□□□□ 0.18
MSLN-207ENST00000566549 ARID1AO14497 2285 aa16.15■□□□□ 0.18
MSLN-207ENST00000566549 ZNF806P0C7X5 589 aa16.15■□□□□ 0.18
MSLN-207ENST00000566549 S100A10P60903 97 aa16.15■□□□□ 0.18
MSLN-207ENST00000566549 RAB1AP62820 205 aa16.15■□□□□ 0.18
MSLN-207ENST00000566549 SLC22A25Q6T423 547 aa16.15■□□□□ 0.18
MSLN-207ENST00000566549 VASH2Q86V25 355 aa16.15■□□□□ 0.18
MSLN-207ENST00000566549 MDS2Q8NDY4 140 aa16.15■□□□□ 0.18
MSLN-207ENST00000566549 BCO1Q9HAY6 547 aa16.15■□□□□ 0.18
MSLN-207ENST00000566549 HSF4Q9ULV5 492 aa16.15■□□□□ 0.18
MSLN-207ENST00000566549 TEX13DA0A0J9YY54 714 aaPredicted RBP16.15■□□□□ 0.18
MSLN-207ENST00000566549 KLRC4-KLRK1H3BQV0 150 aa16.15■□□□□ 0.18
MSLN-207ENST00000566549 GPM6AP51674 278 aa16.15■□□□□ 0.18
MSLN-207ENST00000566549 TRIP6Q15654 476 aaKnown RBP16.15■□□□□ 0.18
MSLN-207ENST00000566549 NRN1LQ496H8 165 aa16.15■□□□□ 0.18
MSLN-207ENST00000566549 PXT1Q8NFP0 134 aa16.15■□□□□ 0.18
MSLN-207ENST00000566549 ZNF442Q9H7R0 627 aa16.15■□□□□ 0.18
MSLN-207ENST00000566549 MSGN1A6NI15 193 aa16.14■□□□□ 0.17
MSLN-207ENST00000566549 IFNA2P01563 188 aa16.14■□□□□ 0.17
MSLN-207ENST00000566549 RBMXP38159 391 aaKnown RBP16.14■□□□□ 0.17
MSLN-207ENST00000566549 ARG2P78540 354 aa16.14■□□□□ 0.17
MSLN-207ENST00000566549 CYCSP99999 105 aaKnown RBP16.14■□□□□ 0.17
MSLN-207ENST00000566549 PRDX4Q13162 271 aa16.14■□□□□ 0.17
MSLN-207ENST00000566549 RAB32Q13637 225 aa16.14■□□□□ 0.17
MSLN-207ENST00000566549 SLC10A1Q14973 349 aa16.14■□□□□ 0.17
MSLN-207ENST00000566549 HIKESHIQ53FT3 197 aa16.14■□□□□ 0.17
MSLN-207ENST00000566549 RNFT1Q5M7Z0 435 aa16.14■□□□□ 0.17
MSLN-207ENST00000566549 COLCA1Q6ZS62 124 aa16.14■□□□□ 0.17
MSLN-207ENST00000566549 MRPL21Q7Z2W9 205 aaKnown RBP16.14■□□□□ 0.17
MSLN-207ENST00000566549 BOLLQ8N9W6 283 aaKnown RBP16.14■□□□□ 0.17
MSLN-207ENST00000566549 SLAMF9Q96A28 289 aa16.14■□□□□ 0.17
MSLN-207ENST00000566549 ARPC5LQ9BPX5 153 aa16.14■□□□□ 0.17
MSLN-207ENST00000566549 RASL12Q9NYN1 266 aa16.14■□□□□ 0.17
MSLN-207ENST00000566549 SESN1Q9Y6P5 492 aa16.14■□□□□ 0.17
MSLN-207ENST00000566549 A0A0B4J2A0 478 aa16.14■□□□□ 0.17
MSLN-207ENST00000566549 RPL36A-HNRNPH2H7BZ11 118 aa16.14■□□□□ 0.17
MSLN-207ENST00000566549 GLI4P10075 376 aa16.14■□□□□ 0.17
MSLN-207ENST00000566549 HAAOP46952 286 aa16.14■□□□□ 0.17
MSLN-207ENST00000566549 PMP22Q01453 160 aa16.14■□□□□ 0.17
MSLN-207ENST00000566549 ELP2Q6IA86 826 aa16.14■□□□□ 0.17
MSLN-207ENST00000566549 FGF23Q9GZV9 251 aaPredicted RBP16.14■□□□□ 0.17
MSLN-207ENST00000566549 NECAP2Q9NVZ3 263 aa16.14■□□□□ 0.17
MSLN-207ENST00000566549 SHPKQ9UHJ6 478 aa16.14■□□□□ 0.17
MSLN-207ENST00000566549 EDARQ9UNE0 448 aa16.14■□□□□ 0.17
MSLN-207ENST00000566549 STARD10Q9Y365 291 aa16.14■□□□□ 0.17
MSLN-207ENST00000566549 CFAP47Q6ZTR5 3102 aa16.13■□□□□ 0.17
MSLN-207ENST00000566549 RRP8O43159 456 aaKnown RBP16.13■□□□□ 0.17
MSLN-207ENST00000566549 RBM11P57052 281 aaKnown RBP16.13■□□□□ 0.17
MSLN-207ENST00000566549 SRSF6Q13247 344 aaKnown RBP16.13■□□□□ 0.17
MSLN-207ENST00000566549 SURF2Q15527 256 aaPredicted RBP16.13■□□□□ 0.17
MSLN-207ENST00000566549 C17orf50Q8WW18 174 aa16.13■□□□□ 0.17
MSLN-207ENST00000566549 HS3ST6Q96QI5 342 aa16.13■□□□□ 0.17
MSLN-207ENST00000566549 REPIN1Q9BWE0 567 aaKnown RBP16.13■□□□□ 0.17
MSLN-207ENST00000566549 EP300Q09472 2414 aaPredicted RBP16.13■□□□□ 0.17
MSLN-207ENST00000566549 F8VVB4 439 aa16.13■□□□□ 0.17
MSLN-207ENST00000566549 F8VWA3 439 aa16.13■□□□□ 0.17
MSLN-207ENST00000566549 PDCD6O75340 191 aa16.13■□□□□ 0.17
MSLN-207ENST00000566549 CD46P15529 392 aa16.13■□□□□ 0.17
MSLN-207ENST00000566549 BCL3P20749 454 aa16.13■□□□□ 0.17
MSLN-207ENST00000566549 MALLQ13021 153 aa16.13■□□□□ 0.17
MSLN-207ENST00000566549 SP6Q3SY56 376 aa16.13■□□□□ 0.17
MSLN-207ENST00000566549 SLC25A32Q9H2D1 315 aa16.13■□□□□ 0.17
MSLN-207ENST00000566549 ZNF724A8MTY0 619 aa16.12■□□□□ 0.17
MSLN-207ENST00000566549 DTYMKP23919 212 aa16.12■□□□□ 0.17
MSLN-207ENST00000566549 TUSC1Q2TAM9 212 aa16.12■□□□□ 0.17
MSLN-207ENST00000566549 Q6ZPA2 131 aa16.12■□□□□ 0.17
MSLN-207ENST00000566549 C5orf24Q7Z6I8 188 aa16.12■□□□□ 0.17
MSLN-207ENST00000566549 SGPP2Q8IWX5 399 aa16.12■□□□□ 0.17
MSLN-207ENST00000566549 HPSE2Q8WWQ2 592 aa16.12■□□□□ 0.17
MSLN-207ENST00000566549 IP6K3Q96PC2 410 aa16.12■□□□□ 0.17
MSLN-207ENST00000566549 MED9Q9NWA0 146 aa16.12■□□□□ 0.17
MSLN-207ENST00000566549 IL36RNQ9UBH0 155 aa16.12■□□□□ 0.17
MSLN-207ENST00000566549 C3orf80F5H4A9 247 aa16.11■□□□□ 0.17
MSLN-207ENST00000566549 HSPB6O14558 160 aa16.11■□□□□ 0.17
MSLN-207ENST00000566549 NUP62P37198 522 aaPredicted RBP16.11■□□□□ 0.17
MSLN-207ENST00000566549 PIGPP57054 158 aa16.11■□□□□ 0.17
MSLN-207ENST00000566549 SNTB1Q13884 538 aaKnown RBP16.11■□□□□ 0.17
MSLN-207ENST00000566549 DAZAP2Q15038 168 aaPredicted RBP16.11■□□□□ 0.17
MSLN-207ENST00000566549 PHLDA2Q53GA4 152 aa16.11■□□□□ 0.17
MSLN-207ENST00000566549 ZNF766Q5HY98 468 aa16.11■□□□□ 0.17
MSLN-207ENST00000566549 POC1AQ8NBT0 407 aa16.11■□□□□ 0.17
MSLN-207ENST00000566549 BVESQ8NE79 360 aa16.11■□□□□ 0.17
MSLN-207ENST00000566549 C2orf50Q96LR7 162 aa16.11■□□□□ 0.17
MSLN-207ENST00000566549 IL36GQ9NZH8 169 aa16.11■□□□□ 0.17
MSLN-207ENST00000566549 SPRR3Q9UBC9 169 aa16.11■□□□□ 0.17
MSLN-207ENST00000566549 PCNX2A6NKB5 2137 aa16.11■□□□□ 0.17
MSLN-207ENST00000566549 CTSDP07339 412 aaPredicted RBP16.11■□□□□ 0.17
MSLN-207ENST00000566549 ZP3P21754 424 aa16.11■□□□□ 0.17
MSLN-207ENST00000566549 FCGR2CP31995 323 aa16.11■□□□□ 0.17
MSLN-207ENST00000566549 RBM39Q14498 530 aaKnown RBP16.11■□□□□ 0.17
MSLN-207ENST00000566549 RNPS1Q15287 305 aaKnown RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms