RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 HGFACQ04756 655 aa12.38□□□□□ -0.43
CDH1-209ENST00000566510 CNN3Q15417 329 aaKnown RBP12.38□□□□□ -0.43
CDH1-209ENST00000566510 TGIF1Q15583 401 aa12.38□□□□□ -0.43
CDH1-209ENST00000566510 FBXW12Q6X9E4 464 aa12.38□□□□□ -0.43
CDH1-209ENST00000566510 FBXL14Q8N1E6 418 aa12.38□□□□□ -0.43
CDH1-209ENST00000566510 UBAC2Q8NBM4 344 aa12.38□□□□□ -0.43
CDH1-209ENST00000566510 OR10AD1Q8NGE0 317 aa12.38□□□□□ -0.43
CDH1-209ENST00000566510 ISOC2Q96AB3 205 aa12.38□□□□□ -0.43
CDH1-209ENST00000566510 SPSB1Q96BD6 273 aa12.38□□□□□ -0.43
CDH1-209ENST00000566510 SLC2A9Q9NRM0 540 aa12.38□□□□□ -0.43
CDH1-209ENST00000566510 COA4Q9NYJ1 87 aa12.38□□□□□ -0.43
CDH1-209ENST00000566510 CACFD1Q9UGQ2 172 aa12.38□□□□□ -0.43
CDH1-209ENST00000566510 FBXO9Q9UK97 447 aaPredicted RBP12.38□□□□□ -0.43
CDH1-209ENST00000566510 PHF1O43189 567 aaPredicted RBP12.38□□□□□ -0.43
CDH1-209ENST00000566510 NRASP01111 189 aa12.38□□□□□ -0.43
CDH1-209ENST00000566510 S100A6P06703 90 aa12.38□□□□□ -0.43
CDH1-209ENST00000566510 DAOP14920 347 aa12.38□□□□□ -0.43
CDH1-209ENST00000566510 NHLH2Q02577 135 aa12.38□□□□□ -0.43
CDH1-209ENST00000566510 TMEM187Q14656 261 aa12.38□□□□□ -0.43
CDH1-209ENST00000566510 KRBOX4Q5JUW0 171 aa12.38□□□□□ -0.43
CDH1-209ENST00000566510 FAM27BQ5VT28 67 aa12.38□□□□□ -0.43
CDH1-209ENST00000566510 MRPL14Q6P1L8 145 aaKnown RBP12.38□□□□□ -0.43
CDH1-209ENST00000566510 SKA3Q8IX90 412 aa12.38□□□□□ -0.43
CDH1-209ENST00000566510 ZIC4Q8N9L1 334 aa12.38□□□□□ -0.43
CDH1-209ENST00000566510 SLC39A7Q92504 469 aa12.38□□□□□ -0.43
CDH1-209ENST00000566510 C10orf35Q96D05 121 aa12.38□□□□□ -0.43
CDH1-209ENST00000566510 DUSP23Q9BVJ7 150 aa12.38□□□□□ -0.43
CDH1-209ENST00000566510 SRXN1Q9BYN0 137 aa12.38□□□□□ -0.43
CDH1-209ENST00000566510 SH3BGRL3Q9H299 93 aa12.38□□□□□ -0.43
CDH1-209ENST00000566510 SPACA1Q9HBV2 294 aa12.38□□□□□ -0.43
CDH1-209ENST00000566510 ST3GAL6Q9Y274 331 aa12.38□□□□□ -0.43
CDH1-209ENST00000566510 HTR5AP47898 357 aa12.37□□□□□ -0.43
CDH1-209ENST00000566510 HIST1H3AP68431 136 aa12.37□□□□□ -0.43
CDH1-209ENST00000566510 GUK1Q16774 197 aa12.37□□□□□ -0.43
CDH1-209ENST00000566510 HIST2H3PS2Q5TEC6 136 aa12.37□□□□□ -0.43
CDH1-209ENST00000566510 HIST2H3AQ71DI3 136 aa12.37□□□□□ -0.43
CDH1-209ENST00000566510 SPEM1Q8N4L4 309 aa12.37□□□□□ -0.43
CDH1-209ENST00000566510 WFDC1Q9HC57 220 aa12.37□□□□□ -0.43
CDH1-209ENST00000566510 KPTNQ9Y664 436 aa12.37□□□□□ -0.43
CDH1-209ENST00000566510 CCDC187A0A096LP49 1063 aa12.37□□□□□ -0.43
CDH1-209ENST00000566510 SNCAP37840 140 aa12.37□□□□□ -0.43
CDH1-209ENST00000566510 MEOX2P50222 304 aa12.37□□□□□ -0.43
CDH1-209ENST00000566510 SSR4P51571 173 aa12.37□□□□□ -0.43
CDH1-209ENST00000566510 YRDCQ86U90 279 aaKnown RBP12.37□□□□□ -0.43
CDH1-209ENST00000566510 OR1F12Q8NHA8 337 aa12.37□□□□□ -0.43
CDH1-209ENST00000566510 PIGCQ92535 297 aa12.37□□□□□ -0.43
CDH1-209ENST00000566510 LUZP4Q9P127 313 aa12.37□□□□□ -0.43
CDH1-209ENST00000566510 FOXD3Q9UJU5 478 aaPredicted RBP12.37□□□□□ -0.43
CDH1-209ENST00000566510 C1orf196B1AJZ1 125 aa12.36□□□□□ -0.43
CDH1-209ENST00000566510 FAM157AC9JC47 383 aa12.36□□□□□ -0.43
CDH1-209ENST00000566510 KLK3P07288 261 aaPredicted RBP12.36□□□□□ -0.43
CDH1-209ENST00000566510 ZNF32P17041 273 aa12.36□□□□□ -0.43
CDH1-209ENST00000566510 CHATP28329 748 aa12.36□□□□□ -0.43
CDH1-209ENST00000566510 EPHA8P29322 1005 aaPredicted RBP12.36□□□□□ -0.43
CDH1-209ENST00000566510 MRPS34P82930 218 aaKnown RBP12.36□□□□□ -0.43
CDH1-209ENST00000566510 AWAT1Q58HT5 328 aa12.36□□□□□ -0.43
CDH1-209ENST00000566510 OSR2Q8N2R0 312 aa12.36□□□□□ -0.43
CDH1-209ENST00000566510 CD300LFQ8TDQ1 290 aa12.36□□□□□ -0.43
CDH1-209ENST00000566510 IP6K3Q96PC2 410 aa12.36□□□□□ -0.43
CDH1-209ENST00000566510 ZNF442Q9H7R0 627 aa12.36□□□□□ -0.43
CDH1-209ENST00000566510 POMT1Q9Y6A1 747 aa12.36□□□□□ -0.43
CDH1-209ENST00000566510 IGHV1-45A0A0A0MS14 117 aa12.36□□□□□ -0.43
CDH1-209ENST00000566510 LY6G6EA0A0G2JKS1 128 aa12.36□□□□□ -0.43
CDH1-209ENST00000566510 ZNF44P15621 663 aa12.36□□□□□ -0.43
CDH1-209ENST00000566510 ITGA3P26006 1051 aa12.36□□□□□ -0.43
CDH1-209ENST00000566510 CXCL12P48061 93 aa12.36□□□□□ -0.43
CDH1-209ENST00000566510 HABP2Q14520 560 aaPredicted RBP12.36□□□□□ -0.43
CDH1-209ENST00000566510 COL19A1Q14993 1142 aa12.36□□□□□ -0.43
CDH1-209ENST00000566510 RAB35Q15286 201 aa12.36□□□□□ -0.43
CDH1-209ENST00000566510 LIAT1Q6ZQX7 453 aa12.36□□□□□ -0.43
CDH1-209ENST00000566510 SUMF1Q8NBK3 374 aa12.36□□□□□ -0.43
CDH1-209ENST00000566510 USB1Q9BQ65 265 aaKnown RBP12.36□□□□□ -0.43
CDH1-209ENST00000566510 ANGPTL4Q9BY76 406 aa12.36□□□□□ -0.43
CDH1-209ENST00000566510 PROK2Q9HC23 129 aa12.36□□□□□ -0.43
CDH1-209ENST00000566510 DECR2Q9NUI1 292 aa12.36□□□□□ -0.43
CDH1-209ENST00000566510 HSF4Q9ULV5 492 aa12.36□□□□□ -0.43
CDH1-209ENST00000566510 FBXO7Q9Y3I1 522 aa12.36□□□□□ -0.43
CDH1-209ENST00000566510 U3KQA8 63 aa12.36□□□□□ -0.43
CDH1-209ENST00000566510 IGKV1-12A0A0C4DH73 117 aa12.35□□□□□ -0.43
CDH1-209ENST00000566510 PQLC2LA1A4F0 135 aa12.35□□□□□ -0.43
CDH1-209ENST00000566510 SYNGR3O43761 229 aa12.35□□□□□ -0.43
CDH1-209ENST00000566510 GPR137BO60478 399 aa12.35□□□□□ -0.43
CDH1-209ENST00000566510 EIF3GO75821 320 aaKnown RBP eCLIP12.35□□□□□ -0.43
CDH1-209ENST00000566510 OR7C1O76099 320 aaPredicted RBP12.35□□□□□ -0.43
CDH1-209ENST00000566510 IGKV1D-12P01611 117 aa12.35□□□□□ -0.43
CDH1-209ENST00000566510 DANCRP0C864 163 aa12.35□□□□□ -0.43
CDH1-209ENST00000566510 DTYMKP23919 212 aa12.35□□□□□ -0.43
CDH1-209ENST00000566510 PTAFRP25105 342 aa12.35□□□□□ -0.43
CDH1-209ENST00000566510 DUSP1P28562 367 aa12.35□□□□□ -0.43
CDH1-209ENST00000566510 NTF4P34130 210 aa12.35□□□□□ -0.43
CDH1-209ENST00000566510 HERV-K104P61576 105 aa12.35□□□□□ -0.43
CDH1-209ENST00000566510 PLCXD3Q63HM9 321 aa12.35□□□□□ -0.43
CDH1-209ENST00000566510 FOXL2NBQ6ZUU3 175 aa12.35□□□□□ -0.43
CDH1-209ENST00000566510 C15orf54Q8N8G6 183 aa12.35□□□□□ -0.43
CDH1-209ENST00000566510 OR14L1PQ8NHC6 308 aa12.35□□□□□ -0.43
CDH1-209ENST00000566510 SYT3Q9BQG1 590 aa12.35□□□□□ -0.43
CDH1-209ENST00000566510 ZNF286AQ9HBT8 521 aa12.35□□□□□ -0.43
CDH1-209ENST00000566510 C19orf12Q9NSK7 152 aa12.35□□□□□ -0.43
CDH1-209ENST00000566510 KIAA1549Q9HCM3 1950 aa12.35□□□□□ -0.43
CDH1-209ENST00000566510 C7orf77A4D0Y5 90 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms