RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 OTX1P32242 354 aaPredicted RBP7.23□□□□□ -1.25
VPS9D1-205ENST00000565452 PRSS12P56730 875 aa7.23□□□□□ -1.25
VPS9D1-205ENST00000565452 RAB40BQ12829 278 aa7.23□□□□□ -1.25
VPS9D1-205ENST00000565452 EIF2B1Q14232 305 aaKnown RBP7.23□□□□□ -1.25
VPS9D1-205ENST00000565452 TAF13Q15543 124 aa7.23□□□□□ -1.25
VPS9D1-205ENST00000565452 SNCBQ16143 134 aa7.23□□□□□ -1.25
VPS9D1-205ENST00000565452 KRTAP27-1Q3LI81 207 aa7.23□□□□□ -1.25
VPS9D1-205ENST00000565452 PLA1AQ53H76 456 aa7.23□□□□□ -1.25
VPS9D1-205ENST00000565452 C9orf66Q5T8R8 295 aa7.23□□□□□ -1.25
VPS9D1-205ENST00000565452 DRAM2Q6UX65 266 aa7.23□□□□□ -1.25
VPS9D1-205ENST00000565452 PLEKHG7Q6ZR37 379 aa7.23□□□□□ -1.25
VPS9D1-205ENST00000565452 MRPL21Q7Z2W9 205 aaKnown RBP7.23□□□□□ -1.25
VPS9D1-205ENST00000565452 MKXQ8IYA7 352 aa7.23□□□□□ -1.25
VPS9D1-205ENST00000565452 BBS1Q8NFJ9 593 aa7.23□□□□□ -1.25
VPS9D1-205ENST00000565452 HAVCR2Q8TDQ0 301 aa7.23□□□□□ -1.25
VPS9D1-205ENST00000565452 THEM6Q8WUY1 208 aa7.23□□□□□ -1.25
VPS9D1-205ENST00000565452 LRRC29Q8WV35 223 aa7.23□□□□□ -1.25
VPS9D1-205ENST00000565452 RNF133Q8WVZ7 376 aa7.23□□□□□ -1.25
VPS9D1-205ENST00000565452 CAPSLQ8WWF8 208 aa7.23□□□□□ -1.25
VPS9D1-205ENST00000565452 DDB2Q92466 427 aa7.23□□□□□ -1.25
VPS9D1-205ENST00000565452 SLAMF6Q96DU3 332 aa7.23□□□□□ -1.25
VPS9D1-205ENST00000565452 KCNJ15Q99712 375 aa7.23□□□□□ -1.25
VPS9D1-205ENST00000565452 ABHD6Q9BV23 337 aa7.23□□□□□ -1.25
VPS9D1-205ENST00000565452 MROQ9BYG7 248 aa7.23□□□□□ -1.25
VPS9D1-205ENST00000565452 MRPL15Q9P015 296 aaKnown RBP7.23□□□□□ -1.25
VPS9D1-205ENST00000565452 SLC25A10Q9UBX3 287 aaPredicted RBP7.23□□□□□ -1.25
VPS9D1-205ENST00000565452 GGT3PA6NGU5 568 aa7.22□□□□□ -1.25
VPS9D1-205ENST00000565452 SULT1C4O75897 302 aa7.22□□□□□ -1.25
VPS9D1-205ENST00000565452 RPSAP08865 295 aaKnown RBP7.22□□□□□ -1.25
VPS9D1-205ENST00000565452 H2BFMP0C1H6 154 aa7.22□□□□□ -1.25
VPS9D1-205ENST00000565452 MYF6P23409 242 aa7.22□□□□□ -1.25
VPS9D1-205ENST00000565452 AZGP1P25311 298 aaKnown RBP7.22□□□□□ -1.25
VPS9D1-205ENST00000565452 DCKP27707 260 aa7.22□□□□□ -1.25
VPS9D1-205ENST00000565452 AQP4P55087 323 aa7.22□□□□□ -1.25
VPS9D1-205ENST00000565452 CAV3P56539 151 aa7.22□□□□□ -1.25
VPS9D1-205ENST00000565452 ACTC1P68032 377 aa7.22□□□□□ -1.25
VPS9D1-205ENST00000565452 ACTA1P68133 377 aa7.22□□□□□ -1.25
VPS9D1-205ENST00000565452 ROM1Q03395 351 aa7.22□□□□□ -1.25
VPS9D1-205ENST00000565452 MED21Q13503 144 aa7.22□□□□□ -1.25
VPS9D1-205ENST00000565452 CORO6Q6QEF8 472 aa7.22□□□□□ -1.25
VPS9D1-205ENST00000565452 IZUMO2Q6UXV1 221 aa7.22□□□□□ -1.25
VPS9D1-205ENST00000565452 ETV3LQ6ZN32 361 aa7.22□□□□□ -1.25
VPS9D1-205ENST00000565452 CFAP77Q6ZQR2 320 aa7.22□□□□□ -1.25
VPS9D1-205ENST00000565452 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.22□□□□□ -1.25
VPS9D1-205ENST00000565452 LINC00346Q8IVM7 164 aa7.22□□□□□ -1.25
VPS9D1-205ENST00000565452 SLC35F2Q8IXU6 374 aa7.22□□□□□ -1.25
VPS9D1-205ENST00000565452 ZNF679Q8IYX0 411 aa7.22□□□□□ -1.25
VPS9D1-205ENST00000565452 ACBD7Q8N6N7 88 aa7.22□□□□□ -1.25
VPS9D1-205ENST00000565452 OR5T2Q8NGG2 359 aa7.22□□□□□ -1.25
VPS9D1-205ENST00000565452 FBLIM1Q8WUP2 373 aa7.22□□□□□ -1.25
VPS9D1-205ENST00000565452 FOXRED1Q96CU9 486 aaPredicted RBP7.22□□□□□ -1.25
VPS9D1-205ENST00000565452 AKR1E2Q96JD6 320 aa7.22□□□□□ -1.25
VPS9D1-205ENST00000565452 ZNF184Q99676 751 aaPredicted RBP7.22□□□□□ -1.25
VPS9D1-205ENST00000565452 ANKRD60Q9BZ19 345 aa7.22□□□□□ -1.25
VPS9D1-205ENST00000565452 ADGRL4Q9HBW9 690 aa7.22□□□□□ -1.25
VPS9D1-205ENST00000565452 FGF20Q9NP95 211 aaPredicted RBP7.22□□□□□ -1.25
VPS9D1-205ENST00000565452 PNRC2Q9NPJ4 139 aaKnown RBP7.22□□□□□ -1.25
VPS9D1-205ENST00000565452 CENPMQ9NSP4 180 aa7.22□□□□□ -1.25
VPS9D1-205ENST00000565452 ZFP57Q9NU63 452 aa7.22□□□□□ -1.25
VPS9D1-205ENST00000565452 CNOT2Q9NZN8 540 aaKnown RBP7.22□□□□□ -1.25
VPS9D1-205ENST00000565452 DNAJC27Q9NZQ0 273 aa7.22□□□□□ -1.25
VPS9D1-205ENST00000565452 ZNF391Q9UJN7 358 aa7.22□□□□□ -1.25
VPS9D1-205ENST00000565452 EFCAB10A6NFE3 127 aa7.21□□□□□ -1.26
VPS9D1-205ENST00000565452 NUDT19A8MXV4 375 aa7.21□□□□□ -1.26
VPS9D1-205ENST00000565452 F5H5K5 113 aa7.21□□□□□ -1.26
VPS9D1-205ENST00000565452 J3QRE1 110 aa7.21□□□□□ -1.26
VPS9D1-205ENST00000565452 M0R135 149 aa7.21□□□□□ -1.26
VPS9D1-205ENST00000565452 DENRO43583 198 aaKnown RBP7.21□□□□□ -1.26
VPS9D1-205ENST00000565452 SELENOFO60613 162 aa7.21□□□□□ -1.26
VPS9D1-205ENST00000565452 WBP4O75554 376 aaKnown RBP7.21□□□□□ -1.26
VPS9D1-205ENST00000565452 ACSM4P0C7M7 580 aa7.21□□□□□ -1.26
VPS9D1-205ENST00000565452 DBTP11182 482 aaKnown RBP7.21□□□□□ -1.26
VPS9D1-205ENST00000565452 PIPP12273 146 aaPredicted RBP7.21□□□□□ -1.26
VPS9D1-205ENST00000565452 CFL1P23528 166 aaKnown RBP7.21□□□□□ -1.26
VPS9D1-205ENST00000565452 HSD11B1P28845 292 aa7.21□□□□□ -1.26
VPS9D1-205ENST00000565452 OPRL1P41146 370 aa7.21□□□□□ -1.26
VPS9D1-205ENST00000565452 CEBPDP49716 269 aaPredicted RBP7.21□□□□□ -1.26
VPS9D1-205ENST00000565452 VEGFCP49767 419 aa7.21□□□□□ -1.26
VPS9D1-205ENST00000565452 DYNLT3P51808 116 aa7.21□□□□□ -1.26
VPS9D1-205ENST00000565452 RIDAP52758 137 aaKnown RBP7.21□□□□□ -1.26
VPS9D1-205ENST00000565452 OR12D2P58182 307 aa7.21□□□□□ -1.26
VPS9D1-205ENST00000565452 MRPL28Q13084 256 aaKnown RBP7.21□□□□□ -1.26
VPS9D1-205ENST00000565452 SSX2Q16385 188 aa7.21□□□□□ -1.26
VPS9D1-205ENST00000565452 RSPO1Q2MKA7 263 aaPredicted RBP7.21□□□□□ -1.26
VPS9D1-205ENST00000565452 ZNF322Q6U7Q0 402 aaPredicted RBP7.21□□□□□ -1.26
VPS9D1-205ENST00000565452 LYPD4Q6UWN0 246 aa7.21□□□□□ -1.26
VPS9D1-205ENST00000565452 LHFPL2Q6ZUX7 228 aa7.21□□□□□ -1.26
VPS9D1-205ENST00000565452 BCDIN3DQ7Z5W3 292 aaKnown RBP7.21□□□□□ -1.26
VPS9D1-205ENST00000565452 KRT77Q7Z794 578 aa7.21□□□□□ -1.26
VPS9D1-205ENST00000565452 LHFPL4Q7Z7J7 247 aa7.21□□□□□ -1.26
VPS9D1-205ENST00000565452 C11orf53Q8IXP5 236 aa7.21□□□□□ -1.26
VPS9D1-205ENST00000565452 FAM185AQ8N0U4 392 aa7.21□□□□□ -1.26
VPS9D1-205ENST00000565452 OR8S1Q8NH09 359 aa7.21□□□□□ -1.26
VPS9D1-205ENST00000565452 RNFT2Q96EX2 444 aa7.21□□□□□ -1.26
VPS9D1-205ENST00000565452 ZNF799Q96GE5 643 aa7.21□□□□□ -1.26
VPS9D1-205ENST00000565452 COPS4Q9BT78 406 aa7.21□□□□□ -1.26
VPS9D1-205ENST00000565452 JAM3Q9BX67 310 aa7.21□□□□□ -1.26
VPS9D1-205ENST00000565452 YTHDF1Q9BYJ9 559 aaKnown RBP7.21□□□□□ -1.26
VPS9D1-205ENST00000565452 OPA3Q9H6K4 179 aa7.21□□□□□ -1.26
VPS9D1-205ENST00000565452 SCN3BQ9NY72 215 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms