RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 MSI2Q96DH6 328 aaKnown RBP21.7■■□□□ 1.06
NME3-208ENST00000565379 FUNDC2Q9BWH2 189 aa21.7■■□□□ 1.06
NME3-208ENST00000565379 TMEM165Q9HC07 324 aa21.7■■□□□ 1.06
NME3-208ENST00000565379 HES4Q9HCC6 221 aa21.7■■□□□ 1.06
NME3-208ENST00000565379 GHRLQ9UBU3 117 aa21.7■■□□□ 1.06
NME3-208ENST00000565379 ZNF780AO75290 641 aaPredicted RBP21.69■■□□□ 1.06
NME3-208ENST00000565379 NXPH2O95156 264 aa21.69■■□□□ 1.06
NME3-208ENST00000565379 EGR1P18146 543 aa21.69■■□□□ 1.06
NME3-208ENST00000565379 FIP1L1Q6UN15 594 aaKnown RBP21.69■■□□□ 1.06
NME3-208ENST00000565379 ASCL4Q6XD76 172 aa21.69■■□□□ 1.06
NME3-208ENST00000565379 OR5D18Q8NGL1 313 aa21.69■■□□□ 1.06
NME3-208ENST00000565379 GAL3ST1Q99999 423 aa21.69■■□□□ 1.06
NME3-208ENST00000565379 FAM192AQ9GZU8 254 aa21.69■■□□□ 1.06
NME3-208ENST00000565379 C3orf80F5H4A9 247 aa21.68■■□□□ 1.06
NME3-208ENST00000565379 SPRY1O43609 319 aaPredicted RBP21.68■■□□□ 1.06
NME3-208ENST00000565379 CD80P33681 288 aa21.68■■□□□ 1.06
NME3-208ENST00000565379 GPR176Q14439 515 aa21.68■■□□□ 1.06
NME3-208ENST00000565379 ACP7Q6ZNF0 438 aa21.68■■□□□ 1.06
NME3-208ENST00000565379 DCDC5Q6ZRR9 648 aa21.68■■□□□ 1.06
NME3-208ENST00000565379 ANKRD13BQ86YJ7 626 aa21.68■■□□□ 1.06
NME3-208ENST00000565379 TMEM158Q8WZ71 300 aa21.68■■□□□ 1.06
NME3-208ENST00000565379 DNTTIP1Q9H147 329 aa21.68■■□□□ 1.06
NME3-208ENST00000565379 METTL9Q9H1A3 318 aa21.68■■□□□ 1.06
NME3-208ENST00000565379 CNTD2Q9H8S5 307 aa21.68■■□□□ 1.06
NME3-208ENST00000565379 IL36GQ9NZH8 169 aa21.68■■□□□ 1.06
NME3-208ENST00000565379 NLKQ9UBE8 527 aa21.68■■□□□ 1.06
NME3-208ENST00000565379 V9GY05 133 aa21.68■■□□□ 1.06
NME3-208ENST00000565379 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP21.67■■□□□ 1.06
NME3-208ENST00000565379 UBBP0CG47 229 aa21.67■■□□□ 1.06
NME3-208ENST00000565379 C1orf100Q5SVJ3 147 aa21.67■■□□□ 1.06
NME3-208ENST00000565379 FAM201AQ5SY85 155 aa21.67■■□□□ 1.06
NME3-208ENST00000565379 SFRP4Q6FHJ7 346 aaPredicted RBP21.67■■□□□ 1.06
NME3-208ENST00000565379 RNF144BQ7Z419 303 aa21.67■■□□□ 1.06
NME3-208ENST00000565379 RAB39BQ96DA2 213 aa21.67■■□□□ 1.06
NME3-208ENST00000565379 MIOXQ9UGB7 285 aa21.67■■□□□ 1.06
NME3-208ENST00000565379 PCDHB10Q9UN67 800 aa21.67■■□□□ 1.06
NME3-208ENST00000565379 IGKV1-12A0A0C4DH73 117 aa21.66■■□□□ 1.06
NME3-208ENST00000565379 ANGPTL7O43827 346 aa21.66■■□□□ 1.06
NME3-208ENST00000565379 IGKV1D-12P01611 117 aa21.66■■□□□ 1.06
NME3-208ENST00000565379 RAB3BP20337 219 aa21.66■■□□□ 1.06
NME3-208ENST00000565379 OR3A4PP47883 348 aa21.66■■□□□ 1.06
NME3-208ENST00000565379 GZMKP49863 264 aa21.66■■□□□ 1.06
NME3-208ENST00000565379 RSU1Q15404 277 aa21.66■■□□□ 1.06
NME3-208ENST00000565379 ELP2Q6IA86 826 aa21.66■■□□□ 1.06
NME3-208ENST00000565379 DEFB108BQ8NET1 73 aa21.66■■□□□ 1.06
NME3-208ENST00000565379 OR6M1Q8NGM8 313 aa21.66■■□□□ 1.06
NME3-208ENST00000565379 TBC1D15Q8TC07 691 aa21.66■■□□□ 1.06
NME3-208ENST00000565379 TMEM246Q9BRR3 403 aa21.66■■□□□ 1.06
NME3-208ENST00000565379 CENPOQ9BU64 300 aa21.66■■□□□ 1.06
NME3-208ENST00000565379 WDR13Q9H1Z4 485 aa21.66■■□□□ 1.06
NME3-208ENST00000565379 SEBOXQ9HB31 216 aaPredicted RBP21.66■■□□□ 1.06
NME3-208ENST00000565379 CDC42EP3Q9UKI2 254 aa21.66■■□□□ 1.06
NME3-208ENST00000565379 ING4Q9UNL4 249 aa21.66■■□□□ 1.06
NME3-208ENST00000565379 MRPS28Q9Y2Q9 187 aaKnown RBP21.66■■□□□ 1.06
NME3-208ENST00000565379 AK6Q9Y3D8 172 aaKnown RBP21.66■■□□□ 1.06
NME3-208ENST00000565379 WNT9BO14905 357 aa21.65■■□□□ 1.06
NME3-208ENST00000565379 ZNF205O95201 554 aa21.65■■□□□ 1.06
NME3-208ENST00000565379 KNG1P01042 644 aa21.65■■□□□ 1.06
NME3-208ENST00000565379 FAM157CP0CG43 387 aa21.65■■□□□ 1.06
NME3-208ENST00000565379 BCL3P20749 454 aa21.65■■□□□ 1.06
NME3-208ENST00000565379 CAPZA1P52907 286 aa21.65■■□□□ 1.06
NME3-208ENST00000565379 ATPAF1Q5TC12 328 aaPredicted RBP21.65■■□□□ 1.06
NME3-208ENST00000565379 AWAT2Q6E213 333 aa21.65■■□□□ 1.06
NME3-208ENST00000565379 FAM58AQ8N1B3 248 aa21.65■■□□□ 1.06
NME3-208ENST00000565379 Q8NFD4 153 aa21.65■■□□□ 1.06
NME3-208ENST00000565379 CLDND2Q8NHS1 167 aa21.65■■□□□ 1.06
NME3-208ENST00000565379 EMG1Q92979 244 aaKnown RBP21.65■■□□□ 1.06
NME3-208ENST00000565379 ZNF488Q96MN9 340 aa21.65■■□□□ 1.06
NME3-208ENST00000565379 ELL3Q9HB65 397 aaPredicted RBP21.65■■□□□ 1.06
NME3-208ENST00000565379 KAAG1Q9UBP8 84 aa21.65■■□□□ 1.06
NME3-208ENST00000565379 GLS2Q9UI32 602 aa21.65■■□□□ 1.06
NME3-208ENST00000565379 OR2AT4A6NND4 320 aa21.64■■□□□ 1.05
NME3-208ENST00000565379 SLC17A2O00624 439 aa21.64■■□□□ 1.05
NME3-208ENST00000565379 SLC22A1O15245 554 aa21.64■■□□□ 1.05
NME3-208ENST00000565379 CSTBP04080 98 aaKnown RBP21.64■■□□□ 1.05
NME3-208ENST00000565379 CFPP27918 469 aa21.64■■□□□ 1.05
NME3-208ENST00000565379 HTR2CP28335 458 aa21.64■■□□□ 1.05
NME3-208ENST00000565379 GMFBP60983 142 aa21.64■■□□□ 1.05
NME3-208ENST00000565379 HNRNPA0Q13151 305 aaKnown RBP21.64■■□□□ 1.05
NME3-208ENST00000565379 SPIN3Q5JUX0 258 aa21.64■■□□□ 1.05
NME3-208ENST00000565379 STUMQ69YW2 141 aa21.64■■□□□ 1.05
NME3-208ENST00000565379 NLRC3Q7RTR2 1065 aa21.64■■□□□ 1.05
NME3-208ENST00000565379 PATZ1Q9HBE1 687 aaKnown RBP21.64■■□□□ 1.05
NME3-208ENST00000565379 PLGRKTQ9HBL7 147 aa21.64■■□□□ 1.05
NME3-208ENST00000565379 HMG20AQ9NP66 347 aa21.64■■□□□ 1.05
NME3-208ENST00000565379 TMEM160Q9NX00 188 aa21.64■■□□□ 1.05
NME3-208ENST00000565379 NKX6-3A6NJ46 265 aa21.63■■□□□ 1.05
NME3-208ENST00000565379 CEACAM18A8MTB9 384 aa21.63■■□□□ 1.05
NME3-208ENST00000565379 TNFRSF13BO14836 293 aaPredicted RBP21.63■■□□□ 1.05
NME3-208ENST00000565379 GABARAPO95166 117 aa21.63■■□□□ 1.05
NME3-208ENST00000565379 RBMXP38159 391 aaKnown RBP21.63■■□□□ 1.05
NME3-208ENST00000565379 NPBWR2P48146 333 aa21.63■■□□□ 1.05
NME3-208ENST00000565379 FGF12P61328 243 aa21.63■■□□□ 1.05
NME3-208ENST00000565379 GLIPR1L1Q6UWM5 242 aa21.63■■□□□ 1.05
NME3-208ENST00000565379 SLC36A1Q7Z2H8 476 aa21.63■■□□□ 1.05
NME3-208ENST00000565379 C1QL2Q7Z5L3 287 aa21.63■■□□□ 1.05
NME3-208ENST00000565379 C19orf18Q8NEA5 215 aa21.63■■□□□ 1.05
NME3-208ENST00000565379 OR4D6Q8NGJ1 314 aa21.63■■□□□ 1.05
NME3-208ENST00000565379 ANGPTL6Q8NI99 470 aa21.63■■□□□ 1.05
NME3-208ENST00000565379 MRPS24Q96EL2 167 aaKnown RBP21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms