RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 DNASE2O00115 360 aaPredicted RBP4.57□□□□□ -1.68
SMG1-211ENST00000565324 NUDT3O95989 172 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 CXorf1O96002 111 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 RBP4P02753 201 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 SLC25A1P53007 311 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 ST3GAL2Q16842 350 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 FAM209BQ5JX69 171 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 CTU1Q7Z7A3 348 aaKnown RBP4.57□□□□□ -1.68
SMG1-211ENST00000565324 TMEM183AQ8IXX5 376 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 OR10G4Q8NGN3 311 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 OR10G9Q8NGN4 311 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 OR10G7Q8NGN6 311 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 FAM131CQ96AQ9 280 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 OR2V2Q96R30 315 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 OR6C1Q96RD1 312 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 ZNF275Q9NSD4 429 aaPredicted RBP4.57□□□□□ -1.68
SMG1-211ENST00000565324 CACNA1DQ01668 2161 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 LOC107984156A0A0G2JMH3 177 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 ZNF98A6NK75 572 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 SMIM13P0DJ93 91 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 HOXD9P28356 352 aaPredicted RBP4.57□□□□□ -1.68
SMG1-211ENST00000565324 ARL17AQ8IVW1 177 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 MORN4Q8NDC4 146 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 TMEM40Q8WWA1 233 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 HIST1H4GQ99525 98 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 PSG11Q9UQ72 335 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 FUT9Q9Y231 359 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 RER1O15258 196 aa4.56□□□□□ -1.68
SMG1-211ENST00000565324 PCP4P48539 62 aa4.56□□□□□ -1.68
SMG1-211ENST00000565324 ACSM5Q6NUN0 579 aa4.56□□□□□ -1.68
SMG1-211ENST00000565324 FAM219AQ8IW50 185 aa4.56□□□□□ -1.68
SMG1-211ENST00000565324 RIMKLAQ8IXN7 391 aa4.56□□□□□ -1.68
SMG1-211ENST00000565324 OR13G1Q8NGZ3 307 aa4.56□□□□□ -1.68
SMG1-211ENST00000565324 OR1F12Q8NHA8 337 aa4.56□□□□□ -1.68
SMG1-211ENST00000565324 FGF14Q92915 247 aa4.56□□□□□ -1.68
SMG1-211ENST00000565324 MS4A6EQ96DS6 147 aa4.56□□□□□ -1.68
SMG1-211ENST00000565324 SYT11Q9BT88 431 aa4.56□□□□□ -1.68
SMG1-211ENST00000565324 MSL2Q9HCI7 577 aa4.56□□□□□ -1.68
SMG1-211ENST00000565324 FGF21Q9NSA1 209 aa4.56□□□□□ -1.68
SMG1-211ENST00000565324 TRPM3Q9HCF6 1732 aaPredicted RBP4.56□□□□□ -1.68
SMG1-211ENST00000565324 IGKV6D-21A0A0A0MT36 114 aa4.56□□□□□ -1.68
SMG1-211ENST00000565324 LINC00862A6NCI5 91 aa4.56□□□□□ -1.68
SMG1-211ENST00000565324 PFN3P60673 137 aa4.56□□□□□ -1.68
SMG1-211ENST00000565324 UBE2L3P68036 154 aaKnown RBP4.56□□□□□ -1.68
SMG1-211ENST00000565324 TWIST1Q15672 202 aa4.56□□□□□ -1.68
SMG1-211ENST00000565324 SMAD2Q15796 467 aaKnown RBP4.56□□□□□ -1.68
SMG1-211ENST00000565324 OR2I1PQ8NGU4 316 aa4.56□□□□□ -1.68
SMG1-211ENST00000565324 KLK11Q9UBX7 282 aa4.56□□□□□ -1.68
SMG1-211ENST00000565324 ADAM20O43506 726 aa4.56□□□□□ -1.68
SMG1-211ENST00000565324 GHRHP01286 108 aa4.56□□□□□ -1.68
SMG1-211ENST00000565324 GNB2P62879 340 aa4.56□□□□□ -1.68
SMG1-211ENST00000565324 YRDCQ86U90 279 aaKnown RBP4.56□□□□□ -1.68
SMG1-211ENST00000565324 SPPL3Q8TCT6 385 aa4.56□□□□□ -1.68
SMG1-211ENST00000565324 SIGLEC11Q96RL6 698 aa4.56□□□□□ -1.68
SMG1-211ENST00000565324 INSM2Q96T92 566 aaPredicted RBP4.56□□□□□ -1.68
SMG1-211ENST00000565324 NUDT16L1Q9BRJ7 211 aaKnown RBP4.56□□□□□ -1.68
SMG1-211ENST00000565324 CAMTA1Q9Y6Y1 1673 aa4.56□□□□□ -1.68
SMG1-211ENST00000565324 PPM1DO15297 605 aa4.56□□□□□ -1.68
SMG1-211ENST00000565324 SRSF10O75494 262 aaKnown RBP4.56□□□□□ -1.68
SMG1-211ENST00000565324 DHRS3O75911 302 aa4.56□□□□□ -1.68
SMG1-211ENST00000565324 ABLIM3O94929 683 aa4.56□□□□□ -1.68
SMG1-211ENST00000565324 PRDX4Q13162 271 aa4.56□□□□□ -1.68
SMG1-211ENST00000565324 CDKN3Q16667 212 aa4.56□□□□□ -1.68
SMG1-211ENST00000565324 PLPPR5Q32ZL2 321 aa4.56□□□□□ -1.68
SMG1-211ENST00000565324 SPATA45Q537H7 98 aa4.56□□□□□ -1.68
SMG1-211ENST00000565324 MORN1Q5T089 497 aa4.56□□□□□ -1.68
SMG1-211ENST00000565324 DEGS2Q6QHC5 323 aa4.56□□□□□ -1.68
SMG1-211ENST00000565324 SLC39A5Q6ZMH5 540 aa4.56□□□□□ -1.68
SMG1-211ENST00000565324 SLC52A3Q9NQ40 469 aa4.56□□□□□ -1.68
SMG1-211ENST00000565324 DAPP1Q9UN19 280 aa4.56□□□□□ -1.68
SMG1-211ENST00000565324 NDUFS8O00217 210 aa4.56□□□□□ -1.68
SMG1-211ENST00000565324 OR5AC1P0C628 307 aa4.56□□□□□ -1.68
SMG1-211ENST00000565324 SEC11BP0C7V7 166 aa4.56□□□□□ -1.68
SMG1-211ENST00000565324 COL19A1Q14993 1142 aa4.56□□□□□ -1.68
SMG1-211ENST00000565324 RTP2Q5QGT7 225 aa4.56□□□□□ -1.68
SMG1-211ENST00000565324 FAAP20Q6NZ36 180 aa4.56□□□□□ -1.68
SMG1-211ENST00000565324 ROBO4Q8WZ75 1007 aa4.56□□□□□ -1.68
SMG1-211ENST00000565324 C10orf35Q96D05 121 aa4.56□□□□□ -1.68
SMG1-211ENST00000565324 HES7Q9BYE0 225 aa4.56□□□□□ -1.68
SMG1-211ENST00000565324 PEF1Q9UBV8 284 aaKnown RBP4.56□□□□□ -1.68
SMG1-211ENST00000565324 FBXL17Q9UF56 701 aa4.56□□□□□ -1.68
SMG1-211ENST00000565324 SOX21Q9Y651 276 aaPredicted RBP4.56□□□□□ -1.68
SMG1-211ENST00000565324 HS3ST3A1Q9Y663 406 aa4.56□□□□□ -1.68
SMG1-211ENST00000565324 GSTZ1O43708 216 aaPredicted RBP4.56□□□□□ -1.68
SMG1-211ENST00000565324 PPP1R1AQ13522 171 aa4.56□□□□□ -1.68
SMG1-211ENST00000565324 COL9A3Q14050 684 aaPredicted RBP4.56□□□□□ -1.68
SMG1-211ENST00000565324 GABRA6Q16445 453 aa4.56□□□□□ -1.68
SMG1-211ENST00000565324 SLC25A35Q3KQZ1 300 aa4.56□□□□□ -1.68
SMG1-211ENST00000565324 CST9Q5W186 159 aa4.56□□□□□ -1.68
SMG1-211ENST00000565324 FANCMQ8IYD8 2048 aa4.56□□□□□ -1.68
SMG1-211ENST00000565324 WNK3Q9BYP7 1800 aa4.56□□□□□ -1.68
SMG1-211ENST00000565324 DDTP30046 118 aa4.56□□□□□ -1.68
SMG1-211ENST00000565324 PPP1CCP36873 323 aaKnown RBP4.56□□□□□ -1.68
SMG1-211ENST00000565324 EMP1P54849 157 aa4.56□□□□□ -1.68
SMG1-211ENST00000565324 ASTLQ6HA08 431 aaPredicted RBP4.56□□□□□ -1.68
SMG1-211ENST00000565324 TCTN3Q6NUS6 607 aa4.56□□□□□ -1.68
SMG1-211ENST00000565324 NKAIN4Q8IVV8 208 aa4.56□□□□□ -1.68
SMG1-211ENST00000565324 NUP37Q8NFH4 326 aa4.56□□□□□ -1.68
SMG1-211ENST00000565324 ADAMTS17Q8TE56 1095 aa4.56□□□□□ -1.68
SMG1-211ENST00000565324 RSRP1Q9BUV0 290 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms