RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 ZNF562Q6V9R5 426 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 RPS27LQ71UM5 84 aaKnown RBP2.93□□□□□ -1.94
CHD9-212ENST00000564641 P4HA3Q7Z4N8 544 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 TGIF2LXQ8IUE1 241 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 CCDC71Q8IV32 467 aaPredicted RBP2.93□□□□□ -1.94
CHD9-212ENST00000564641 PYROXD2Q8N2H3 581 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 FAM86B1Q8N7N1 296 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 B3GNT7Q8NFL0 401 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 OR2L5Q8NG80 312 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 OR10A6Q8NH74 314 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 OR6X1Q8NH79 312 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 ACOT12Q8WYK0 555 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 NAT6Q93015 286 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 NTAN1Q96AB6 310 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 ISG20Q96AZ6 181 aaKnown RBP2.93□□□□□ -1.94
CHD9-212ENST00000564641 S100PBPQ96BU1 408 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 L3HYPDHQ96EM0 354 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 C4orf36Q96KX1 117 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 CCNL2Q96S94 520 aaPredicted RBP2.93□□□□□ -1.94
CHD9-212ENST00000564641 PEBP4Q96S96 227 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 C7orf50Q9BRJ6 194 aaKnown RBP2.93□□□□□ -1.94
CHD9-212ENST00000564641 GGACTQ9BVM4 153 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 TAPBPLQ9BX59 468 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 DEFB126Q9BYW3 111 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 POLR2J2Q9GZM3 115 aaKnown RBP2.93□□□□□ -1.94
CHD9-212ENST00000564641 TOLLIPQ9H0E2 274 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 OPN3Q9H1Y3 402 aaPredicted RBP2.93□□□□□ -1.94
CHD9-212ENST00000564641 ABCG5Q9H222 651 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 RHBGQ9H310 441 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 METTL17Q9H7H0 456 aaPredicted RBP2.93□□□□□ -1.94
CHD9-212ENST00000564641 Q9HAA7 133 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 SLC25A19Q9HC21 320 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 MRPS30Q9NP92 439 aaKnown RBP2.93□□□□□ -1.94
CHD9-212ENST00000564641 TREM1Q9NP99 234 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 SMCO4Q9NRQ5 59 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 CISHQ9NSE2 258 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 TXNL4BQ9NX01 149 aaKnown RBP2.93□□□□□ -1.94
CHD9-212ENST00000564641 ZNF226Q9NYT6 803 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 VAPAQ9P0L0 249 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 IL17CQ9P0M4 197 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 METTL1Q9UBP6 276 aaKnown RBP2.93□□□□□ -1.94
CHD9-212ENST00000564641 ZNF629Q9UEG4 869 aaPredicted RBP2.93□□□□□ -1.94
CHD9-212ENST00000564641 Q9UF83 564 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 ZNF346Q9UL40 294 aaKnown RBP2.93□□□□□ -1.94
CHD9-212ENST00000564641 FZR1Q9UM11 496 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 TP53TG5Q9Y2B4 290 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 SLC9A8Q9Y2E8 581 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 NPTNQ9Y639 398 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 PTPRQQ9UMZ3 2332 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 ZFHX4Q86UP3 3567 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 BPTFQ12830 3046 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 PTPRBP23467 1997 aa2.92□□□□□ -1.94
CHD9-212ENST00000564641 PCDH15Q96QU1 1955 aa2.92□□□□□ -1.94
CHD9-212ENST00000564641 WDFY3Q8IZQ1 3526 aa2.92□□□□□ -1.94
CHD9-212ENST00000564641 MYO18BQ8IUG5 2567 aa2.92□□□□□ -1.94
CHD9-212ENST00000564641 NBEAQ8NFP9 2946 aa2.92□□□□□ -1.94
CHD9-212ENST00000564641 TMEM72A0PK05 275 aa2.92□□□□□ -1.94
CHD9-212ENST00000564641 OR6C74A6NCV1 312 aa2.92□□□□□ -1.94
CHD9-212ENST00000564641 LRIT2A6NDA9 550 aa2.92□□□□□ -1.94
CHD9-212ENST00000564641 TMEM210A6NLX4 147 aa2.92□□□□□ -1.94
CHD9-212ENST00000564641 HMSDA8MTL9 139 aa2.92□□□□□ -1.94
CHD9-212ENST00000564641 ZNF724A8MTY0 619 aa2.92□□□□□ -1.94
CHD9-212ENST00000564641 C5orf58C9J3I9 102 aa2.92□□□□□ -1.94
CHD9-212ENST00000564641 PPIAL4DF5H284 164 aa2.92□□□□□ -1.94
CHD9-212ENST00000564641 TSTD3H0UI37 97 aa2.92□□□□□ -1.94
CHD9-212ENST00000564641 J3QKU1 62 aa2.92□□□□□ -1.94
CHD9-212ENST00000564641 K7EQM0 130 aa2.92□□□□□ -1.94
CHD9-212ENST00000564641 TNFRSF11BO00300 401 aa2.92□□□□□ -1.94
CHD9-212ENST00000564641 PRKYO43930 277 aa2.92□□□□□ -1.94
CHD9-212ENST00000564641 TBL1XO60907 577 aa2.92□□□□□ -1.94
CHD9-212ENST00000564641 CLDN11O75508 207 aa2.92□□□□□ -1.94
CHD9-212ENST00000564641 MED6O75586 246 aa2.92□□□□□ -1.94
CHD9-212ENST00000564641 RHBDL1O75783 438 aa2.92□□□□□ -1.94
CHD9-212ENST00000564641 AP2A1O95782 977 aa2.92□□□□□ -1.94
CHD9-212ENST00000564641 OTCP00480 354 aa2.92□□□□□ -1.94
CHD9-212ENST00000564641 CD2P06729 351 aa2.92□□□□□ -1.94
CHD9-212ENST00000564641 ANXA4P09525 319 aaPredicted RBP2.92□□□□□ -1.94
CHD9-212ENST00000564641 GIPP09681 153 aaPredicted RBP2.92□□□□□ -1.94
CHD9-212ENST00000564641 OR4E1P0C645 316 aa2.92□□□□□ -1.94
CHD9-212ENST00000564641 CISD3P0C7P0 127 aa2.92□□□□□ -1.94
CHD9-212ENST00000564641 SLC2A1P11166 492 aa2.92□□□□□ -1.94
CHD9-212ENST00000564641 PIPP12273 146 aaPredicted RBP2.92□□□□□ -1.94
CHD9-212ENST00000564641 NR2C1P13056 603 aa2.92□□□□□ -1.94
CHD9-212ENST00000564641 ADRB3P13945 408 aa2.92□□□□□ -1.94
CHD9-212ENST00000564641 MUC1P15941 1255 aaPredicted RBP2.92□□□□□ -1.94
CHD9-212ENST00000564641 NQO2P16083 231 aa2.92□□□□□ -1.94
CHD9-212ENST00000564641 CCR1P32246 355 aa2.92□□□□□ -1.94
CHD9-212ENST00000564641 IDH2P48735 452 aaKnown RBP2.92□□□□□ -1.94
CHD9-212ENST00000564641 RGS4P49798 205 aa2.92□□□□□ -1.94
CHD9-212ENST00000564641 STK19P49842 368 aaPredicted RBP2.92□□□□□ -1.94
CHD9-212ENST00000564641 PPT1P50897 306 aa2.92□□□□□ -1.94
CHD9-212ENST00000564641 PLK1P53350 603 aa2.92□□□□□ -1.94
CHD9-212ENST00000564641 CTBP2P56545 445 aa2.92□□□□□ -1.94
CHD9-212ENST00000564641 NUTF2P61970 127 aaKnown RBP2.92□□□□□ -1.94
CHD9-212ENST00000564641 PITPNAQ00169 270 aa2.92□□□□□ -1.94
CHD9-212ENST00000564641 SEMG2Q02383 582 aa2.92□□□□□ -1.94
CHD9-212ENST00000564641 GLO1Q04760 184 aa2.92□□□□□ -1.94
CHD9-212ENST00000564641 ADIGQ0VDE8 80 aa2.92□□□□□ -1.94
CHD9-212ENST00000564641 MLLT11Q13015 90 aaPredicted RBP2.92□□□□□ -1.94
CHD9-212ENST00000564641 DOC2AQ14183 400 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 170.8 ms