RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 SHCBP1LQ9BZQ2 653 aa1.98□□□□□ -2.09
SHCBP1-202ENST00000563219 FBXL15Q9H469 300 aa1.98□□□□□ -2.09
SHCBP1-202ENST00000563219 LRRC19Q9H756 370 aa1.98□□□□□ -2.09
SHCBP1-202ENST00000563219 ABCB9Q9NP78 766 aa1.98□□□□□ -2.09
SHCBP1-202ENST00000563219 C12orf4Q9NQ89 552 aa1.98□□□□□ -2.09
SHCBP1-202ENST00000563219 NLE1Q9NVX2 485 aaPredicted RBP1.98□□□□□ -2.09
SHCBP1-202ENST00000563219 STX18Q9P2W9 335 aaKnown RBP1.98□□□□□ -2.09
SHCBP1-202ENST00000563219 SLC7A11Q9UPY5 501 aa1.98□□□□□ -2.09
SHCBP1-202ENST00000563219 ARID1AO14497 2285 aa1.98□□□□□ -2.09
SHCBP1-202ENST00000563219 ROCK1Q13464 1354 aa1.98□□□□□ -2.09
SHCBP1-202ENST00000563219 IGHV7-4-1A0A0J9YVY3 117 aa1.97□□□□□ -2.09
SHCBP1-202ENST00000563219 C7orf66A4D0T2 115 aa1.97□□□□□ -2.09
SHCBP1-202ENST00000563219 GOLGA8IPA6NC78 632 aa1.97□□□□□ -2.09
SHCBP1-202ENST00000563219 F8VP50 259 aa1.97□□□□□ -2.09
SHCBP1-202ENST00000563219 GOLGA8MH3BSY2 632 aa1.97□□□□□ -2.09
SHCBP1-202ENST00000563219 MAGEB4O15481 346 aaPredicted RBP1.97□□□□□ -2.09
SHCBP1-202ENST00000563219 SGCEO43556 437 aa1.97□□□□□ -2.09
SHCBP1-202ENST00000563219 GATCO43716 136 aaKnown RBP1.97□□□□□ -2.09
SHCBP1-202ENST00000563219 CYTH3O43739 400 aa1.97□□□□□ -2.09
SHCBP1-202ENST00000563219 PLIN3O60664 434 aa1.97□□□□□ -2.09
SHCBP1-202ENST00000563219 OR5F1O95221 314 aa1.97□□□□□ -2.09
SHCBP1-202ENST00000563219 WISP3O95389 354 aaPredicted RBP1.97□□□□□ -2.09
SHCBP1-202ENST00000563219 SNAP29O95721 258 aa1.97□□□□□ -2.09
SHCBP1-202ENST00000563219 IGKV3-11P04433 115 aa1.97□□□□□ -2.09
SHCBP1-202ENST00000563219 SEC11BP0C7V7 166 aa1.97□□□□□ -2.09
SHCBP1-202ENST00000563219 SLC35E2BP0CK96 405 aa1.97□□□□□ -2.09
SHCBP1-202ENST00000563219 HLA-GP17693 338 aa1.97□□□□□ -2.09
SHCBP1-202ENST00000563219 TAC1P20366 129 aa1.97□□□□□ -2.09
SHCBP1-202ENST00000563219 PRSS3P35030 304 aa1.97□□□□□ -2.09
SHCBP1-202ENST00000563219 PCK1P35558 622 aa1.97□□□□□ -2.09
SHCBP1-202ENST00000563219 CXCL12P48061 93 aa1.97□□□□□ -2.09
SHCBP1-202ENST00000563219 XKP51811 444 aa1.97□□□□□ -2.09
SHCBP1-202ENST00000563219 TAS2R43P59537 309 aa1.97□□□□□ -2.09
SHCBP1-202ENST00000563219 TSPAN5P62079 268 aa1.97□□□□□ -2.09
SHCBP1-202ENST00000563219 DYNLL1P63167 89 aaKnown RBP1.97□□□□□ -2.09
SHCBP1-202ENST00000563219 UBE2IP63279 158 aaKnown RBP1.97□□□□□ -2.09
SHCBP1-202ENST00000563219 CDC20Q12834 499 aa1.97□□□□□ -2.09
SHCBP1-202ENST00000563219 RAB31Q13636 194 aa1.97□□□□□ -2.09
SHCBP1-202ENST00000563219 EBI3Q14213 229 aa1.97□□□□□ -2.09
SHCBP1-202ENST00000563219 FLOT2Q14254 428 aa1.97□□□□□ -2.09
SHCBP1-202ENST00000563219 BSXQ3C1V8 233 aa1.97□□□□□ -2.09
SHCBP1-202ENST00000563219 ABCA11PQ4W5N1 156 aa1.97□□□□□ -2.09
SHCBP1-202ENST00000563219 IDNKQ5T6J7 187 aa1.97□□□□□ -2.09
SHCBP1-202ENST00000563219 KHDRBS2Q5VWX1 349 aaKnown RBP1.97□□□□□ -2.09
SHCBP1-202ENST00000563219 PTRHD1Q6GMV3 140 aaKnown RBP1.97□□□□□ -2.09
SHCBP1-202ENST00000563219 Q6ZT83 130 aa1.97□□□□□ -2.09
SHCBP1-202ENST00000563219 C10orf107Q8IVU9 208 aa1.97□□□□□ -2.09
SHCBP1-202ENST00000563219 SAXO1Q8IYX7 474 aa1.97□□□□□ -2.09
SHCBP1-202ENST00000563219 OR2Z1Q8NG97 314 aa1.97□□□□□ -2.09
SHCBP1-202ENST00000563219 OR1L1Q8NH94 360 aa1.97□□□□□ -2.09
SHCBP1-202ENST00000563219 ZNF461Q8TAF7 563 aa1.97□□□□□ -2.09
SHCBP1-202ENST00000563219 UBALD1Q8TB05 177 aa1.97□□□□□ -2.09
SHCBP1-202ENST00000563219 DYDC1Q8WWB3 177 aa1.97□□□□□ -2.09
SHCBP1-202ENST00000563219 CHMP6Q96FZ7 201 aa1.97□□□□□ -2.09
SHCBP1-202ENST00000563219 TRNT1Q96Q11 434 aaKnown RBP1.97□□□□□ -2.09
SHCBP1-202ENST00000563219 RNF5Q99942 180 aa1.97□□□□□ -2.09
SHCBP1-202ENST00000563219 PRORYQ9H606 182 aa1.97□□□□□ -2.09
SHCBP1-202ENST00000563219 MAT2BQ9NZL9 334 aa1.97□□□□□ -2.09
SHCBP1-202ENST00000563219 DNAJC27Q9NZQ0 273 aa1.97□□□□□ -2.09
SHCBP1-202ENST00000563219 PRO0628Q9UI54 55 aa1.97□□□□□ -2.09
SHCBP1-202ENST00000563219 TFR2Q9UP52 801 aa1.97□□□□□ -2.09
SHCBP1-202ENST00000563219 ACOT9Q9Y305 439 aa1.97□□□□□ -2.09
SHCBP1-202ENST00000563219 SNX24Q9Y343 169 aa1.97□□□□□ -2.09
SHCBP1-202ENST00000563219 ZNF706Q9Y5V0 76 aaPredicted RBP1.97□□□□□ -2.09
SHCBP1-202ENST00000563219 VWA8A3KMH1 1905 aa1.96□□□□□ -2.1
SHCBP1-202ENST00000563219 IGKV2D-24A0A075B6R9 120 aa1.96□□□□□ -2.1
SHCBP1-202ENST00000563219 RNASEK-C17orf49H0YIS7 233 aa1.96□□□□□ -2.1
SHCBP1-202ENST00000563219 K7EM74 188 aa1.96□□□□□ -2.1
SHCBP1-202ENST00000563219 TOR1AO14656 332 aa1.96□□□□□ -2.1
SHCBP1-202ENST00000563219 CALUO43852 315 aaPredicted RBP1.96□□□□□ -2.1
SHCBP1-202ENST00000563219 ADAP1O75689 374 aa1.96□□□□□ -2.1
SHCBP1-202ENST00000563219 FADS2O95864 444 aaKnown RBP1.96□□□□□ -2.1
SHCBP1-202ENST00000563219 CDK1P06493 297 aa1.96□□□□□ -2.1
SHCBP1-202ENST00000563219 S100A2P29034 98 aa1.96□□□□□ -2.1
SHCBP1-202ENST00000563219 GDI2P50395 445 aaKnown RBP1.96□□□□□ -2.1
SHCBP1-202ENST00000563219 RAB38P57729 211 aa1.96□□□□□ -2.1
SHCBP1-202ENST00000563219 MYL6P60660 151 aa1.96□□□□□ -2.1
SHCBP1-202ENST00000563219 CASP8Q14790 479 aa1.96□□□□□ -2.1
SHCBP1-202ENST00000563219 TMEM241Q24JQ0 296 aa1.96□□□□□ -2.1
SHCBP1-202ENST00000563219 C5orf47Q569G3 176 aa1.96□□□□□ -2.1
SHCBP1-202ENST00000563219 Q5W150 140 aa1.96□□□□□ -2.1
SHCBP1-202ENST00000563219 ZNF773Q6PK81 442 aa1.96□□□□□ -2.1
SHCBP1-202ENST00000563219 UGT2A3Q6UWM9 527 aa1.96□□□□□ -2.1
SHCBP1-202ENST00000563219 USP50Q70EL3 339 aaPredicted RBP1.96□□□□□ -2.1
SHCBP1-202ENST00000563219 CYP4Z2PQ8N1L4 340 aa1.96□□□□□ -2.1
SHCBP1-202ENST00000563219 LINC00337Q8N6G1 96 aa1.96□□□□□ -2.1
SHCBP1-202ENST00000563219 ATP6V1C2Q8NEY4 427 aa1.96□□□□□ -2.1
SHCBP1-202ENST00000563219 OR51Q1Q8NH59 317 aa1.96□□□□□ -2.1
SHCBP1-202ENST00000563219 RNASEH2CQ8TDP1 164 aaKnown RBP1.96□□□□□ -2.1
SHCBP1-202ENST00000563219 TNFRSF14Q92956 283 aa1.96□□□□□ -2.1
SHCBP1-202ENST00000563219 SLC25A46Q96AG3 418 aa1.96□□□□□ -2.1
SHCBP1-202ENST00000563219 OPTNQ96CV9 577 aa1.96□□□□□ -2.1
SHCBP1-202ENST00000563219 YIPF6Q96EC8 236 aa1.96□□□□□ -2.1
SHCBP1-202ENST00000563219 PGLYRP3Q96LB9 341 aa1.96□□□□□ -2.1
SHCBP1-202ENST00000563219 DERL3Q96Q80 235 aa1.96□□□□□ -2.1
SHCBP1-202ENST00000563219 LINC01587Q99440 93 aa1.96□□□□□ -2.1
SHCBP1-202ENST00000563219 APOL4Q9BPW4 351 aa1.96□□□□□ -2.1
SHCBP1-202ENST00000563219 TBL1XR1Q9BZK7 514 aa1.96□□□□□ -2.1
SHCBP1-202ENST00000563219 ULBP1Q9BZM6 244 aa1.96□□□□□ -2.1
SHCBP1-202ENST00000563219 POMKQ9H5K3 350 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms