RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 ZNF615Q8N8J6 731 aa8.23□□□□□ -1.09
CDH1-205ENST00000562836 OR4B1Q8NGF8 309 aa8.23□□□□□ -1.09
CDH1-205ENST00000562836 BAHD1Q8TBE0 780 aaPredicted RBP8.23□□□□□ -1.09
CDH1-205ENST00000562836 TMEM37Q8WXS4 190 aa8.23□□□□□ -1.09
CDH1-205ENST00000562836 PSMF1Q92530 271 aa8.23□□□□□ -1.09
CDH1-205ENST00000562836 GABRG3Q99928 467 aa8.23□□□□□ -1.09
CDH1-205ENST00000562836 MAP1LC3BQ9GZQ8 125 aa8.23□□□□□ -1.09
CDH1-205ENST00000562836 APMAPQ9HDC9 416 aa8.23□□□□□ -1.09
CDH1-205ENST00000562836 TICRRQ7Z2Z1 1910 aa8.23□□□□□ -1.09
CDH1-205ENST00000562836 MSGN1A6NI15 193 aa8.22□□□□□ -1.09
CDH1-205ENST00000562836 EEDO75530 441 aaKnown RBP8.22□□□□□ -1.09
CDH1-205ENST00000562836 OR2J3O76001 311 aa8.22□□□□□ -1.09
CDH1-205ENST00000562836 AGFG2O95081 481 aa8.22□□□□□ -1.09
CDH1-205ENST00000562836 GPANK1O95872 356 aa8.22□□□□□ -1.09
CDH1-205ENST00000562836 SLC25A4P12235 298 aa8.22□□□□□ -1.09
CDH1-205ENST00000562836 GPR1P46091 355 aa8.22□□□□□ -1.09
CDH1-205ENST00000562836 OR8B8Q15620 311 aa8.22□□□□□ -1.09
CDH1-205ENST00000562836 POM121L1PQ3SYA9 428 aa8.22□□□□□ -1.09
CDH1-205ENST00000562836 TMEM176BQ3YBM2 270 aaPredicted RBP8.22□□□□□ -1.09
CDH1-205ENST00000562836 CRB2Q5IJ48 1285 aa8.22□□□□□ -1.09
CDH1-205ENST00000562836 WIPI1Q5MNZ9 446 aaPredicted RBP8.22□□□□□ -1.09
CDH1-205ENST00000562836 TXNRD3NBQ6F5E7 133 aa8.22□□□□□ -1.09
CDH1-205ENST00000562836 SEC22AQ96IW7 307 aa8.22□□□□□ -1.09
CDH1-205ENST00000562836 TSPAN32Q96QS1 320 aa8.22□□□□□ -1.09
CDH1-205ENST00000562836 SPATA25Q9BR10 227 aa8.22□□□□□ -1.09
CDH1-205ENST00000562836 RTBDNQ9BSG5 229 aaPredicted RBP8.22□□□□□ -1.09
CDH1-205ENST00000562836 SNRNP25Q9BV90 132 aaKnown RBP8.22□□□□□ -1.09
CDH1-205ENST00000562836 GABARAPL3Q9BY60 117 aa8.22□□□□□ -1.09
CDH1-205ENST00000562836 PARP12Q9H0J9 701 aaKnown RBP8.22□□□□□ -1.09
CDH1-205ENST00000562836 TUBB1Q9H4B7 451 aa8.22□□□□□ -1.09
CDH1-205ENST00000562836 YIPF1Q9Y548 306 aa8.22□□□□□ -1.09
CDH1-205ENST00000562836 SNX11Q9Y5W9 270 aa8.22□□□□□ -1.09
CDH1-205ENST00000562836 FOCADQ5VW36 1801 aa8.22□□□□□ -1.09
CDH1-205ENST00000562836 GLOD5A6NK44 160 aa8.22□□□□□ -1.09
CDH1-205ENST00000562836 UBL3O95164 117 aa8.22□□□□□ -1.09
CDH1-205ENST00000562836 HPNP05981 417 aa8.22□□□□□ -1.09
CDH1-205ENST00000562836 EN2P19622 333 aaPredicted RBP8.22□□□□□ -1.09
CDH1-205ENST00000562836 GDF5P43026 501 aa8.22□□□□□ -1.09
CDH1-205ENST00000562836 FZD2Q14332 565 aa8.22□□□□□ -1.09
CDH1-205ENST00000562836 LY6G6FQ5SQ64 297 aa8.22□□□□□ -1.09
CDH1-205ENST00000562836 ZNF621Q6ZSS3 439 aa8.22□□□□□ -1.09
CDH1-205ENST00000562836 GALNT16Q8N428 558 aa8.22□□□□□ -1.09
CDH1-205ENST00000562836 OR5K2Q8NHB8 316 aa8.22□□□□□ -1.09
CDH1-205ENST00000562836 SGK2Q9HBY8 427 aa8.22□□□□□ -1.09
CDH1-205ENST00000562836 DCAF13Q9NV06 445 aaKnown RBP8.22□□□□□ -1.09
CDH1-205ENST00000562836 LAMP3Q9UQV4 416 aa8.22□□□□□ -1.09
CDH1-205ENST00000562836 GOLGB1Q14789 3259 aaKnown RBP8.22□□□□□ -1.09
CDH1-205ENST00000562836 COL5A3P25940 1745 aaPredicted RBP8.22□□□□□ -1.09
CDH1-205ENST00000562836 ZSWIM8A7E2V4 1837 aa8.22□□□□□ -1.09
CDH1-205ENST00000562836 TMEM213A2RRL7 107 aa8.22□□□□□ -1.09
CDH1-205ENST00000562836 OR4C45A6NMZ5 311 aa8.22□□□□□ -1.09
CDH1-205ENST00000562836 NKX2-8O15522 239 aa8.22□□□□□ -1.09
CDH1-205ENST00000562836 RS1O15537 224 aa8.22□□□□□ -1.09
CDH1-205ENST00000562836 EGR1P18146 543 aa8.22□□□□□ -1.09
CDH1-205ENST00000562836 NPY1RP25929 384 aa8.22□□□□□ -1.09
CDH1-205ENST00000562836 CTRLP40313 264 aa8.22□□□□□ -1.09
CDH1-205ENST00000562836 ATP1B3P54709 279 aa8.22□□□□□ -1.09
CDH1-205ENST00000562836 RPL8P62917 257 aaKnown RBP8.22□□□□□ -1.09
CDH1-205ENST00000562836 SIRPAP78324 504 aa8.22□□□□□ -1.09
CDH1-205ENST00000562836 BCL2L1Q07817 233 aa8.22□□□□□ -1.09
CDH1-205ENST00000562836 PRSS53Q2L4Q9 553 aa8.22□□□□□ -1.09
CDH1-205ENST00000562836 GATSQ8NAP1 163 aa8.22□□□□□ -1.09
CDH1-205ENST00000562836 PROKR1Q8TCW9 393 aa8.22□□□□□ -1.09
CDH1-205ENST00000562836 PYURFQ96I23 114 aa8.22□□□□□ -1.09
CDH1-205ENST00000562836 ATOH8Q96SQ7 321 aa8.22□□□□□ -1.09
CDH1-205ENST00000562836 MAGIXQ9H6Y5 334 aa8.22□□□□□ -1.09
CDH1-205ENST00000562836 AKIRIN1Q9H9L7 192 aaPredicted RBP8.22□□□□□ -1.09
CDH1-205ENST00000562836 HINT3Q9NQE9 182 aaKnown RBP8.22□□□□□ -1.09
CDH1-205ENST00000562836 DNAJC27Q9NZQ0 273 aa8.22□□□□□ -1.09
CDH1-205ENST00000562836 AK3Q9UIJ7 227 aa8.22□□□□□ -1.09
CDH1-205ENST00000562836 ZNF214Q9UL59 606 aaPredicted RBP8.22□□□□□ -1.09
CDH1-205ENST00000562836 SF3B6Q9Y3B4 125 aaKnown RBP8.22□□□□□ -1.09
CDH1-205ENST00000562836 COL24A1Q17RW2 1714 aa8.21□□□□□ -1.09
CDH1-205ENST00000562836 A0A0J9YY10 115 aa8.21□□□□□ -1.1
CDH1-205ENST00000562836 A0A1B0GX78 115 aa8.21□□□□□ -1.1
CDH1-205ENST00000562836 MEGF11A6BM72 1044 aa8.21□□□□□ -1.1
CDH1-205ENST00000562836 SHISA7A6NL88 538 aa8.21□□□□□ -1.1
CDH1-205ENST00000562836 FAM90A27PA6NNH2 459 aa8.21□□□□□ -1.1
CDH1-205ENST00000562836 C1QTNF9BB2RNN3 333 aa8.21□□□□□ -1.1
CDH1-205ENST00000562836 NRASP01111 189 aa8.21□□□□□ -1.1
CDH1-205ENST00000562836 CA3P07451 260 aa8.21□□□□□ -1.1
CDH1-205ENST00000562836 FTH1P19P0C7X4 201 aa8.21□□□□□ -1.1
CDH1-205ENST00000562836 CT45A8P0DMV1 189 aa8.21□□□□□ -1.1
CDH1-205ENST00000562836 CT45A9P0DMV2 189 aa8.21□□□□□ -1.1
CDH1-205ENST00000562836 MAOAP21397 527 aa8.21□□□□□ -1.1
CDH1-205ENST00000562836 PDE7AQ13946 482 aa8.21□□□□□ -1.1
CDH1-205ENST00000562836 IAH1Q2TAA2 248 aaPredicted RBP8.21□□□□□ -1.1
CDH1-205ENST00000562836 SLC25A52Q3SY17 297 aa8.21□□□□□ -1.1
CDH1-205ENST00000562836 OXLD1Q5BKU9 147 aa8.21□□□□□ -1.1
CDH1-205ENST00000562836 CT45A2Q5DJT8 189 aa8.21□□□□□ -1.1
CDH1-205ENST00000562836 C12orf54Q6X4T0 127 aa8.21□□□□□ -1.1
CDH1-205ENST00000562836 NR2C2APQ86WQ0 139 aa8.21□□□□□ -1.1
CDH1-205ENST00000562836 CDC20BQ86Y33 519 aa8.21□□□□□ -1.1
CDH1-205ENST00000562836 SYS1Q8N2H4 156 aa8.21□□□□□ -1.1
CDH1-205ENST00000562836 ZNF676Q8N7Q3 588 aa8.21□□□□□ -1.1
CDH1-205ENST00000562836 OR8B12Q8NGG6 310 aa8.21□□□□□ -1.1
CDH1-205ENST00000562836 OR6T1Q8NGN1 323 aa8.21□□□□□ -1.1
CDH1-205ENST00000562836 ZNF681Q96N22 645 aa8.21□□□□□ -1.1
CDH1-205ENST00000562836 SMG9Q9H0W8 520 aaKnown RBP8.21□□□□□ -1.1
CDH1-205ENST00000562836 MFSD1Q9H3U5 465 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms