RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 DUX4L7P0CJ90 424 aa11.14□□□□□ -0.63
CDH1-204ENST00000562118 PPIAL4GP0DN37 164 aa11.14□□□□□ -0.63
CDH1-204ENST00000562118 ADRA2CP18825 462 aa11.14□□□□□ -0.63
CDH1-204ENST00000562118 BDKRB2P30411 391 aa11.14□□□□□ -0.63
CDH1-204ENST00000562118 NPBWR2P48146 333 aa11.14□□□□□ -0.63
CDH1-204ENST00000562118 CAV3P56539 151 aa11.14□□□□□ -0.63
CDH1-204ENST00000562118 ARMCX4Q5H9R4 360 aa11.14□□□□□ -0.63
CDH1-204ENST00000562118 NHLRC3Q5JS37 347 aa11.14□□□□□ -0.63
CDH1-204ENST00000562118 DUX4L9Q6RFH8 374 aaPredicted RBP11.14□□□□□ -0.63
CDH1-204ENST00000562118 SLC36A1Q7Z2H8 476 aa11.14□□□□□ -0.63
CDH1-204ENST00000562118 GLCCI1Q86VQ1 547 aa11.14□□□□□ -0.63
CDH1-204ENST00000562118 CD177Q8N6Q3 437 aa11.14□□□□□ -0.63
CDH1-204ENST00000562118 NKAIN3Q8N8D7 197 aa11.14□□□□□ -0.63
CDH1-204ENST00000562118 LY6G5BQ8NDX9 201 aa11.14□□□□□ -0.63
CDH1-204ENST00000562118 C8orf46Q8TAG6 207 aa11.14□□□□□ -0.63
CDH1-204ENST00000562118 SLAMF9Q96A28 289 aa11.14□□□□□ -0.63
CDH1-204ENST00000562118 C1orf147Q96MC9 270 aaPredicted RBP11.14□□□□□ -0.63
CDH1-204ENST00000562118 SPACA5Q96QH8 159 aa11.14□□□□□ -0.63
CDH1-204ENST00000562118 HMG20AQ9NP66 347 aa11.14□□□□□ -0.63
CDH1-204ENST00000562118 HIF1ANQ9NWT6 349 aa11.14□□□□□ -0.63
CDH1-204ENST00000562118 CKLFQ9UBR5 152 aa11.14□□□□□ -0.63
CDH1-204ENST00000562118 DUX4Q9UBX2 424 aa11.14□□□□□ -0.63
CDH1-204ENST00000562118 MAB21L2Q9Y586 359 aa11.14□□□□□ -0.63
CDH1-204ENST00000562118 INSIG2Q9Y5U4 225 aa11.14□□□□□ -0.63
CDH1-204ENST00000562118 IGHV2-70DA0A0C4DH43 119 aa11.13□□□□□ -0.63
CDH1-204ENST00000562118 C22orf46C9J442 243 aa11.13□□□□□ -0.63
CDH1-204ENST00000562118 ADAM20O43506 726 aa11.13□□□□□ -0.63
CDH1-204ENST00000562118 ZNF737O75373 536 aa11.13□□□□□ -0.63
CDH1-204ENST00000562118 NXPH2O95156 264 aa11.13□□□□□ -0.63
CDH1-204ENST00000562118 SFTPBP07988 381 aa11.13□□□□□ -0.63
CDH1-204ENST00000562118 HCKP08631 526 aa11.13□□□□□ -0.63
CDH1-204ENST00000562118 HSMCR30P0CW71 290 aa11.13□□□□□ -0.63
CDH1-204ENST00000562118 BCL3P20749 454 aa11.13□□□□□ -0.63
CDH1-204ENST00000562118 CFPP27918 469 aa11.13□□□□□ -0.63
CDH1-204ENST00000562118 PPP3R1P63098 170 aa11.13□□□□□ -0.63
CDH1-204ENST00000562118 FABP5Q01469 135 aa11.13□□□□□ -0.63
CDH1-204ENST00000562118 PAX8Q06710 450 aa11.13□□□□□ -0.63
CDH1-204ENST00000562118 DGUOKQ16854 277 aa11.13□□□□□ -0.63
CDH1-204ENST00000562118 TUSC1Q2TAM9 212 aa11.13□□□□□ -0.63
CDH1-204ENST00000562118 SPIN3Q5JUX0 258 aa11.13□□□□□ -0.63
CDH1-204ENST00000562118 FAM27D1Q5T7N8 215 aa11.13□□□□□ -0.63
CDH1-204ENST00000562118 DDI2Q5TDH0 399 aa11.13□□□□□ -0.63
CDH1-204ENST00000562118 C1orf229Q6ZS94 237 aaPredicted RBP11.13□□□□□ -0.63
CDH1-204ENST00000562118 C1QL2Q7Z5L3 287 aa11.13□□□□□ -0.63
CDH1-204ENST00000562118 ZNF561Q8N587 486 aa11.13□□□□□ -0.63
CDH1-204ENST00000562118 FAM216BQ8N7L0 139 aa11.13□□□□□ -0.63
CDH1-204ENST00000562118 BOLLQ8N9W6 283 aaKnown RBP11.13□□□□□ -0.63
CDH1-204ENST00000562118 OR51T1Q8NGJ9 327 aa11.13□□□□□ -0.63
CDH1-204ENST00000562118 MUL1Q969V5 352 aa11.13□□□□□ -0.63
CDH1-204ENST00000562118 MED30Q96HR3 178 aa11.13□□□□□ -0.63
CDH1-204ENST00000562118 CCL13Q99616 98 aa11.13□□□□□ -0.63
CDH1-204ENST00000562118 UQCC2Q9BRT2 126 aa11.13□□□□□ -0.63
CDH1-204ENST00000562118 TMED9Q9BVK6 235 aa11.13□□□□□ -0.63
CDH1-204ENST00000562118 TMPRSS13Q9BYE2 586 aa11.13□□□□□ -0.63
CDH1-204ENST00000562118 FAM234AQ9H0X4 552 aa11.13□□□□□ -0.63
CDH1-204ENST00000562118 MMP26Q9NRE1 261 aa11.13□□□□□ -0.63
CDH1-204ENST00000562118 RBFOX1Q9NWB1 397 aaKnown RBP11.13□□□□□ -0.63
CDH1-204ENST00000562118 DNAJB11Q9UBS4 358 aa11.13□□□□□ -0.63
CDH1-204ENST00000562118 CLN8Q9UBY8 286 aa11.13□□□□□ -0.63
CDH1-204ENST00000562118 OPN4Q9UHM6 478 aa11.13□□□□□ -0.63
CDH1-204ENST00000562118 KCNS2Q9ULS6 477 aa11.13□□□□□ -0.63
CDH1-204ENST00000562118 KIR2DS1A0A191URI9 304 aa11.12□□□□□ -0.63
CDH1-204ENST00000562118 MEGF11A6BM72 1044 aa11.12□□□□□ -0.63
CDH1-204ENST00000562118 RFPL4AA6NLU0 287 aa11.12□□□□□ -0.63
CDH1-204ENST00000562118 RFPL4AL1F8VTS6 287 aa11.12□□□□□ -0.63
CDH1-204ENST00000562118 CCRL2O00421 344 aa11.12□□□□□ -0.63
CDH1-204ENST00000562118 DVL1O14640 695 aa11.12□□□□□ -0.63
CDH1-204ENST00000562118 TMPRSS2O15393 492 aa11.12□□□□□ -0.63
CDH1-204ENST00000562118 PHF1O43189 567 aaPredicted RBP11.12□□□□□ -0.63
CDH1-204ENST00000562118 SPRY1O43609 319 aaPredicted RBP11.12□□□□□ -0.63
CDH1-204ENST00000562118 RGS9O75916 674 aaPredicted RBP11.12□□□□□ -0.63
CDH1-204ENST00000562118 INMTO95050 263 aa11.12□□□□□ -0.63
CDH1-204ENST00000562118 ECDO95905 644 aaPredicted RBP11.12□□□□□ -0.63
CDH1-204ENST00000562118 JUNBP17275 347 aaPredicted RBP11.12□□□□□ -0.63
CDH1-204ENST00000562118 LMO1P25800 156 aa11.12□□□□□ -0.63
CDH1-204ENST00000562118 ZNF93P35789 620 aaPredicted RBP11.12□□□□□ -0.63
CDH1-204ENST00000562118 PTGFRP43088 359 aa11.12□□□□□ -0.63
CDH1-204ENST00000562118 MTNR1BP49286 362 aa11.12□□□□□ -0.63
CDH1-204ENST00000562118 BMXP51813 675 aa11.12□□□□□ -0.63
CDH1-204ENST00000562118 FGF12P61328 243 aa11.12□□□□□ -0.63
CDH1-204ENST00000562118 GNB2P62879 340 aa11.12□□□□□ -0.63
CDH1-204ENST00000562118 IL13RA1P78552 427 aa11.12□□□□□ -0.63
CDH1-204ENST00000562118 LCN2P80188 198 aa11.12□□□□□ -0.63
CDH1-204ENST00000562118 FAM58AQ8N1B3 248 aa11.12□□□□□ -0.63
CDH1-204ENST00000562118 RFT1Q96AA3 541 aa11.12□□□□□ -0.63
CDH1-204ENST00000562118 NR1H4Q96RI1 486 aaPredicted RBP11.12□□□□□ -0.63
CDH1-204ENST00000562118 IFT22Q9H7X7 185 aa11.12□□□□□ -0.63
CDH1-204ENST00000562118 SNTG1Q9NSN8 517 aa11.12□□□□□ -0.63
CDH1-204ENST00000562118 IL36RNQ9UBH0 155 aa11.12□□□□□ -0.63
CDH1-204ENST00000562118 A0A0G2JMP0 313 aa11.11□□□□□ -0.63
CDH1-204ENST00000562118 A0A0X1KG70 313 aa11.11□□□□□ -0.63
CDH1-204ENST00000562118 TRDV1A0A1B0GX56 115 aa11.11□□□□□ -0.63
CDH1-204ENST00000562118 NKX6-3A6NJ46 265 aa11.11□□□□□ -0.63
CDH1-204ENST00000562118 INAFM1C9JVW0 142 aa11.11□□□□□ -0.63
CDH1-204ENST00000562118 MAGEB3O15480 346 aa11.11□□□□□ -0.63
CDH1-204ENST00000562118 ANGPTL7O43827 346 aa11.11□□□□□ -0.63
CDH1-204ENST00000562118 CRLF1O75462 422 aa11.11□□□□□ -0.63
CDH1-204ENST00000562118 CYB5AP00167 134 aa11.11□□□□□ -0.63
CDH1-204ENST00000562118 AVPP01185 164 aa11.11□□□□□ -0.63
CDH1-204ENST00000562118 TFF1P04155 84 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms