RNA–Protein interactions for RNA: ENST00000561954.1

IFT140-205, Transcript of intraflagellar transport 140, humanhuman

TSL 3

Gene IFT140, Length 826 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-205ENST00000561954 SSX1Q16384 188 aa11.66□□□□□ -0.54
IFT140-205ENST00000561954 SYT6Q5T7P8 510 aaPredicted RBP11.66□□□□□ -0.54
IFT140-205ENST00000561954 WDR25Q64LD2 544 aaPredicted RBP11.66□□□□□ -0.54
IFT140-205ENST00000561954 LYPD2Q6UXB3 125 aa11.66□□□□□ -0.54
IFT140-205ENST00000561954 BTNL3Q6UXE8 466 aa11.66□□□□□ -0.54
IFT140-205ENST00000561954 ZNF788Q6ZQV5 615 aa11.66□□□□□ -0.54
IFT140-205ENST00000561954 FAM58AQ8N1B3 248 aa11.66□□□□□ -0.54
IFT140-205ENST00000561954 ZNF561Q8N587 486 aa11.66□□□□□ -0.54
IFT140-205ENST00000561954 FAM216BQ8N7L0 139 aa11.66□□□□□ -0.54
IFT140-205ENST00000561954 FOXRED1Q96CU9 486 aaPredicted RBP11.66□□□□□ -0.54
IFT140-205ENST00000561954 SDSLQ96GA7 329 aa11.66□□□□□ -0.54
IFT140-205ENST00000561954 CCL13Q99616 98 aa11.66□□□□□ -0.54
IFT140-205ENST00000561954 UQCC2Q9BRT2 126 aa11.66□□□□□ -0.54
IFT140-205ENST00000561954 GSX1Q9H4S2 264 aaPredicted RBP11.66□□□□□ -0.54
IFT140-205ENST00000561954 YAE1D1Q9NRH1 226 aa11.66□□□□□ -0.54
IFT140-205ENST00000561954 PCDHB16Q9NRJ7 776 aa11.66□□□□□ -0.54
IFT140-205ENST00000561954 RBFOX1Q9NWB1 397 aaKnown RBP11.66□□□□□ -0.54
IFT140-205ENST00000561954 LPAR3Q9UBY5 353 aa11.66□□□□□ -0.54
IFT140-205ENST00000561954 ZNF222Q9UK12 451 aa11.66□□□□□ -0.54
IFT140-205ENST00000561954 IGKV1D-17A0A075B6S4 117 aa11.65□□□□□ -0.54
IFT140-205ENST00000561954 KIAA1324LA8MWY0 1029 aaPredicted RBP11.65□□□□□ -0.54
IFT140-205ENST00000561954 DVL1O14640 695 aa11.65□□□□□ -0.54
IFT140-205ENST00000561954 TNFRSF13BO14836 293 aaPredicted RBP11.65□□□□□ -0.54
IFT140-205ENST00000561954 PIN1P1O15428 100 aa11.65□□□□□ -0.54
IFT140-205ENST00000561954 PHF1O43189 567 aaPredicted RBP11.65□□□□□ -0.54
IFT140-205ENST00000561954 ENSAO43768 121 aaKnown RBP11.65□□□□□ -0.54
IFT140-205ENST00000561954 ANGPTL7O43827 346 aa11.65□□□□□ -0.54
IFT140-205ENST00000561954 MAS1P04201 325 aa11.65□□□□□ -0.54
IFT140-205ENST00000561954 PRKACAP17612 351 aa11.65□□□□□ -0.54
IFT140-205ENST00000561954 BCL3P20749 454 aa11.65□□□□□ -0.54
IFT140-205ENST00000561954 PTGFRP43088 359 aa11.65□□□□□ -0.54
IFT140-205ENST00000561954 GABRA2P47869 451 aa11.65□□□□□ -0.54
IFT140-205ENST00000561954 MTNR1BP49286 362 aa11.65□□□□□ -0.54
IFT140-205ENST00000561954 INSL4Q14641 139 aa11.65□□□□□ -0.54
IFT140-205ENST00000561954 DCAF12L2Q5VW00 463 aa11.65□□□□□ -0.54
IFT140-205ENST00000561954 CD200R1LQ6Q8B3 271 aa11.65□□□□□ -0.54
IFT140-205ENST00000561954 LURAP1LQ8IV03 231 aa11.65□□□□□ -0.54
IFT140-205ENST00000561954 ST8SIA4Q92187 359 aa11.65□□□□□ -0.54
IFT140-205ENST00000561954 MUL1Q969V5 352 aa11.65□□□□□ -0.54
IFT140-205ENST00000561954 ORAI1Q96D31 301 aa11.65□□□□□ -0.54
IFT140-205ENST00000561954 SEH1LQ96EE3 360 aa11.65□□□□□ -0.54
IFT140-205ENST00000561954 GAFA1Q96PS6 74 aa11.65□□□□□ -0.54
IFT140-205ENST00000561954 SEBOXQ9HB31 216 aaPredicted RBP11.65□□□□□ -0.54
IFT140-205ENST00000561954 ELL3Q9HB65 397 aaPredicted RBP11.65□□□□□ -0.54
IFT140-205ENST00000561954 HMG20AQ9NP66 347 aa11.65□□□□□ -0.54
IFT140-205ENST00000561954 IL36GQ9NZH8 169 aa11.65□□□□□ -0.54
IFT140-205ENST00000561954 OR14J1Q9UGF5 321 aa11.65□□□□□ -0.54
IFT140-205ENST00000561954 SF3B6Q9Y3B4 125 aaKnown RBP11.65□□□□□ -0.54
IFT140-205ENST00000561954 NSD1Q96L73 2696 aaPredicted RBP11.64□□□□□ -0.55
IFT140-205ENST00000561954 LOC105371242A0A075B767 164 aa11.64□□□□□ -0.55
IFT140-205ENST00000561954 MAGEA13PA6NCF6 341 aa11.64□□□□□ -0.55
IFT140-205ENST00000561954 RFPL4AA6NLU0 287 aa11.64□□□□□ -0.55
IFT140-205ENST00000561954 RFPL4AL1F8VTS6 287 aa11.64□□□□□ -0.55
IFT140-205ENST00000561954 INMTO95050 263 aa11.64□□□□□ -0.55
IFT140-205ENST00000561954 SRMP19623 302 aa11.64□□□□□ -0.55
IFT140-205ENST00000561954 MYL9P24844 172 aa11.64□□□□□ -0.55
IFT140-205ENST00000561954 CALRP27797 417 aaKnown RBP11.64□□□□□ -0.55
IFT140-205ENST00000561954 PRDX2P32119 198 aa11.64□□□□□ -0.55
IFT140-205ENST00000561954 OR3A4PP47883 348 aa11.64□□□□□ -0.55
IFT140-205ENST00000561954 CAV3P56539 151 aa11.64□□□□□ -0.55
IFT140-205ENST00000561954 FABP5Q01469 135 aa11.64□□□□□ -0.55
IFT140-205ENST00000561954 IKZF1Q13422 519 aa11.64□□□□□ -0.55
IFT140-205ENST00000561954 GPR176Q14439 515 aa11.64□□□□□ -0.55
IFT140-205ENST00000561954 ZNF146Q15072 292 aa11.64□□□□□ -0.55
IFT140-205ENST00000561954 TIMM50Q3ZCQ8 353 aa11.64□□□□□ -0.55
IFT140-205ENST00000561954 FAM27D1Q5T7N8 215 aa11.64□□□□□ -0.55
IFT140-205ENST00000561954 GLT8D1Q68CQ7 371 aa11.64□□□□□ -0.55
IFT140-205ENST00000561954 ELP2Q6IA86 826 aa11.64□□□□□ -0.55
IFT140-205ENST00000561954 CRIP3Q6Q6R5 217 aa11.64□□□□□ -0.55
IFT140-205ENST00000561954 ZNF841Q6ZN19 808 aa11.64□□□□□ -0.55
IFT140-205ENST00000561954 TMEM91Q6ZNR0 172 aa11.64□□□□□ -0.55
IFT140-205ENST00000561954 BATF2Q8N1L9 274 aa11.64□□□□□ -0.55
IFT140-205ENST00000561954 TMEM185AQ8NFB2 350 aa11.64□□□□□ -0.55
IFT140-205ENST00000561954 OR5T2Q8NGG2 359 aa11.64□□□□□ -0.55
IFT140-205ENST00000561954 FAM234AQ9H0X4 552 aa11.64□□□□□ -0.55
IFT140-205ENST00000561954 METTL9Q9H1A3 318 aa11.64□□□□□ -0.55
IFT140-205ENST00000561954 GHRLQ9UBU3 117 aa11.64□□□□□ -0.55
IFT140-205ENST00000561954 SLC25A10Q9UBX3 287 aaPredicted RBP11.64□□□□□ -0.55
IFT140-205ENST00000561954 CDC42EP3Q9UKI2 254 aa11.64□□□□□ -0.55
IFT140-205ENST00000561954 STUB1Q9UNE7 303 aa11.64□□□□□ -0.55
IFT140-205ENST00000561954 TRBV23-1A0A0A0MS06 115 aa11.63□□□□□ -0.55
IFT140-205ENST00000561954 IGHV2-70DA0A0C4DH43 119 aa11.63□□□□□ -0.55
IFT140-205ENST00000561954 IGKV1-12A0A0C4DH73 117 aa11.63□□□□□ -0.55
IFT140-205ENST00000561954 TRDV1A0A1B0GX56 115 aa11.63□□□□□ -0.55
IFT140-205ENST00000561954 HAND1O96004 215 aa11.63□□□□□ -0.55
IFT140-205ENST00000561954 IGKV1D-12P01611 117 aa11.63□□□□□ -0.55
IFT140-205ENST00000561954 CSTBP04080 98 aaKnown RBP11.63□□□□□ -0.55
IFT140-205ENST00000561954 CHRM2P08172 466 aa11.63□□□□□ -0.55
IFT140-205ENST00000561954 UBBP0CG47 229 aa11.63□□□□□ -0.55
IFT140-205ENST00000561954 ZFP36P26651 326 aaKnown RBP11.63□□□□□ -0.55
IFT140-205ENST00000561954 NPBWR2P48146 333 aa11.63□□□□□ -0.55
IFT140-205ENST00000561954 PSMD7P51665 324 aa11.63□□□□□ -0.55
IFT140-205ENST00000561954 CAPZA1P52907 286 aa11.63□□□□□ -0.55
IFT140-205ENST00000561954 FGF12P61328 243 aa11.63□□□□□ -0.55
IFT140-205ENST00000561954 AWAT2Q6E213 333 aa11.63□□□□□ -0.55
IFT140-205ENST00000561954 LINC00596Q86U02 117 aa11.63□□□□□ -0.55
IFT140-205ENST00000561954 ASCC1Q8N9N2 400 aaKnown RBP11.63□□□□□ -0.55
IFT140-205ENST00000561954 CHST4Q8NCG5 386 aa11.63□□□□□ -0.55
IFT140-205ENST00000561954 PPP1R35Q8TAP8 253 aa11.63□□□□□ -0.55
IFT140-205ENST00000561954 TBC1D15Q8TC07 691 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms