RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 DLX6P56179 175 aa8.37□□□□□ -1.07
CLK3-205ENST00000561673 OR12D2P58182 307 aa8.37□□□□□ -1.07
CLK3-205ENST00000561673 ZNF273Q14593 569 aa8.37□□□□□ -1.07
CLK3-205ENST00000561673 ZFP1Q6P2D0 407 aa8.37□□□□□ -1.07
CLK3-205ENST00000561673 SLC25A26Q70HW3 274 aa8.37□□□□□ -1.07
CLK3-205ENST00000561673 FAM220AQ7Z4H9 259 aa8.37□□□□□ -1.07
CLK3-205ENST00000561673 KCTD20Q7Z5Y7 419 aa8.37□□□□□ -1.07
CLK3-205ENST00000561673 CBR4Q8N4T8 237 aa8.37□□□□□ -1.07
CLK3-205ENST00000561673 OR2G2Q8NGZ5 317 aa8.37□□□□□ -1.07
CLK3-205ENST00000561673 C10orf35Q96D05 121 aa8.37□□□□□ -1.07
CLK3-205ENST00000561673 ADAT3Q96EY9 351 aaPredicted RBP8.37□□□□□ -1.07
CLK3-205ENST00000561673 SSX3Q99909 188 aa8.37□□□□□ -1.07
CLK3-205ENST00000561673 MEGF9Q9H1U4 602 aa8.37□□□□□ -1.07
CLK3-205ENST00000561673 AASSQ9UDR5 926 aa8.37□□□□□ -1.07
CLK3-205ENST00000561673 IGKV1-9A0A0C4DH69 117 aa8.36□□□□□ -1.07
CLK3-205ENST00000561673 hCG_1809904A0A1W2PP81 198 aa8.36□□□□□ -1.07
CLK3-205ENST00000561673 A0A1W2PPE2 198 aa8.36□□□□□ -1.07
CLK3-205ENST00000561673 A0A1W2PR64 198 aa8.36□□□□□ -1.07
CLK3-205ENST00000561673 A0A1W2PRV1 198 aa8.36□□□□□ -1.07
CLK3-205ENST00000561673 MEX3AA1L020 520 aaKnown RBP8.36□□□□□ -1.07
CLK3-205ENST00000561673 H3BUX3 64 aa8.36□□□□□ -1.07
CLK3-205ENST00000561673 SLC16A6O15403 523 aa8.36□□□□□ -1.07
CLK3-205ENST00000561673 ZNF737O75373 536 aa8.36□□□□□ -1.07
CLK3-205ENST00000561673 ISG15P05161 165 aa8.36□□□□□ -1.07
CLK3-205ENST00000561673 CHRM2P08172 466 aa8.36□□□□□ -1.07
CLK3-205ENST00000561673 COX7A1P24310 79 aa8.36□□□□□ -1.07
CLK3-205ENST00000561673 NPBWR2P48146 333 aa8.36□□□□□ -1.07
CLK3-205ENST00000561673 RBP2P50120 134 aa8.36□□□□□ -1.07
CLK3-205ENST00000561673 BMXP51813 675 aa8.36□□□□□ -1.07
CLK3-205ENST00000561673 NANOS3P60323 173 aaKnown RBP8.36□□□□□ -1.07
CLK3-205ENST00000561673 TMEM244Q5VVB8 128 aa8.36□□□□□ -1.07
CLK3-205ENST00000561673 MEDAGQ5VYS4 303 aa8.36□□□□□ -1.07
CLK3-205ENST00000561673 ASPHD2Q6ICH7 369 aa8.36□□□□□ -1.07
CLK3-205ENST00000561673 SLC35E4Q6ICL7 350 aa8.36□□□□□ -1.07
CLK3-205ENST00000561673 FDX2Q6P4F2 183 aa8.36□□□□□ -1.07
CLK3-205ENST00000561673 ZNF782Q6ZMW2 699 aaPredicted RBP8.36□□□□□ -1.07
CLK3-205ENST00000561673 CCDC121Q6ZUS5 278 aa8.36□□□□□ -1.07
CLK3-205ENST00000561673 EGFL6Q8IUX8 553 aa8.36□□□□□ -1.07
CLK3-205ENST00000561673 ASCC1Q8N9N2 400 aaKnown RBP8.36□□□□□ -1.07
CLK3-205ENST00000561673 PPP1R35Q8TAP8 253 aa8.36□□□□□ -1.07
CLK3-205ENST00000561673 PP6455Q8WZ26 134 aa8.36□□□□□ -1.07
CLK3-205ENST00000561673 FGGYQ96C11 551 aa8.36□□□□□ -1.07
CLK3-205ENST00000561673 BORCS8Q96FH0 119 aa8.36□□□□□ -1.07
CLK3-205ENST00000561673 MBOAT4Q96T53 435 aa8.36□□□□□ -1.07
CLK3-205ENST00000561673 PPA2Q9H2U2 334 aa8.36□□□□□ -1.07
CLK3-205ENST00000561673 IL36RNQ9UBH0 155 aa8.36□□□□□ -1.07
CLK3-205ENST00000561673 EXOGQ9Y2C4 368 aaKnown RBP8.36□□□□□ -1.07
CLK3-205ENST00000561673 TMEM82A0PJX8 343 aa8.35□□□□□ -1.07
CLK3-205ENST00000561673 FAM90A8PA6NJQ4 464 aa8.35□□□□□ -1.07
CLK3-205ENST00000561673 C17orf98A8MV24 154 aa8.35□□□□□ -1.07
CLK3-205ENST00000561673 J3QLW9 94 aa8.35□□□□□ -1.07
CLK3-205ENST00000561673 ZNF19P17023 458 aa8.35□□□□□ -1.07
CLK3-205ENST00000561673 GABRB1P18505 474 aa8.35□□□□□ -1.07
CLK3-205ENST00000561673 ATF1P18846 271 aa8.35□□□□□ -1.07
CLK3-205ENST00000561673 BCL3P20749 454 aa8.35□□□□□ -1.07
CLK3-205ENST00000561673 ATP1B3P54709 279 aa8.35□□□□□ -1.07
CLK3-205ENST00000561673 MTCP1P56278 107 aa8.35□□□□□ -1.07
CLK3-205ENST00000561673 LGALS4P56470 323 aa8.35□□□□□ -1.07
CLK3-205ENST00000561673 EDDM3BP56851 147 aa8.35□□□□□ -1.07
CLK3-205ENST00000561673 ACTC1P68032 377 aa8.35□□□□□ -1.07
CLK3-205ENST00000561673 ACTA1P68133 377 aa8.35□□□□□ -1.07
CLK3-205ENST00000561673 CNN3Q15417 329 aaKnown RBP8.35□□□□□ -1.07
CLK3-205ENST00000561673 LY6EQ16553 131 aa8.35□□□□□ -1.07
CLK3-205ENST00000561673 LRRC75BQ2VPJ9 315 aa8.35□□□□□ -1.07
CLK3-205ENST00000561673 CRIP3Q6Q6R5 217 aa8.35□□□□□ -1.07
CLK3-205ENST00000561673 UTS2BQ765I0 119 aa8.35□□□□□ -1.07
CLK3-205ENST00000561673 GDPD3Q7L5L3 318 aa8.35□□□□□ -1.07
CLK3-205ENST00000561673 OR8H2Q8N162 312 aa8.35□□□□□ -1.07
CLK3-205ENST00000561673 ACBD7Q8N6N7 88 aa8.35□□□□□ -1.07
CLK3-205ENST00000561673 DNAAF1Q8NEP3 725 aa8.35□□□□□ -1.07
CLK3-205ENST00000561673 OR51A4Q8NGJ6 313 aa8.35□□□□□ -1.07
CLK3-205ENST00000561673 PIFOQ8TCI5 191 aa8.35□□□□□ -1.07
CLK3-205ENST00000561673 LGALS12Q96DT0 336 aa8.35□□□□□ -1.07
CLK3-205ENST00000561673 PELI1Q96FA3 418 aa8.35□□□□□ -1.07
CLK3-205ENST00000561673 SNX22Q96L94 193 aa8.35□□□□□ -1.07
CLK3-205ENST00000561673 TCF7L1Q9HCS4 588 aa8.35□□□□□ -1.07
CLK3-205ENST00000561673 RBFOX1Q9NWB1 397 aaKnown RBP8.35□□□□□ -1.07
CLK3-205ENST00000561673 GMPPBQ9Y5P6 360 aa8.35□□□□□ -1.07
CLK3-205ENST00000561673 A6NJY4 79 aa8.34□□□□□ -1.07
CLK3-205ENST00000561673 SNTNA6NMZ2 147 aa8.34□□□□□ -1.07
CLK3-205ENST00000561673 M0QZ24 198 aa8.34□□□□□ -1.07
CLK3-205ENST00000561673 TIMM23O14925 209 aa8.34□□□□□ -1.07
CLK3-205ENST00000561673 PSPNO60542 156 aa8.34□□□□□ -1.07
CLK3-205ENST00000561673 HAND1O96004 215 aa8.34□□□□□ -1.07
CLK3-205ENST00000561673 IGHA1P01876 353 aa8.34□□□□□ -1.07
CLK3-205ENST00000561673 HTR1AP08908 422 aa8.34□□□□□ -1.07
CLK3-205ENST00000561673 ZNF728P0DKX0 622 aa8.34□□□□□ -1.07
CLK3-205ENST00000561673 CALCBP10092 127 aa8.34□□□□□ -1.07
CLK3-205ENST00000561673 ZNF20P17024 532 aa8.34□□□□□ -1.07
CLK3-205ENST00000561673 PRKACBP22694 351 aa8.34□□□□□ -1.07
CLK3-205ENST00000561673 AZGP1P25311 298 aaKnown RBP8.34□□□□□ -1.07
CLK3-205ENST00000561673 DUSP1P28562 367 aa8.34□□□□□ -1.07
CLK3-205ENST00000561673 POU3F4P49335 361 aa8.34□□□□□ -1.07
CLK3-205ENST00000561673 CCR9P51686 369 aa8.34□□□□□ -1.07
CLK3-205ENST00000561673 PDZK1IP1Q13113 114 aa8.34□□□□□ -1.07
CLK3-205ENST00000561673 GALEQ14376 348 aa8.34□□□□□ -1.07
CLK3-205ENST00000561673 ZNF146Q15072 292 aa8.34□□□□□ -1.07
CLK3-205ENST00000561673 AANATQ16613 207 aa8.34□□□□□ -1.07
CLK3-205ENST00000561673 TCF23Q7RTU1 214 aa8.34□□□□□ -1.07
CLK3-205ENST00000561673 RNF144BQ7Z419 303 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms