RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 SFTPBP07988 381 aa6.95□□□□□ -1.3
PALB2-202ENST00000561514 RHCEP18577 417 aa6.95□□□□□ -1.3
PALB2-202ENST00000561514 OMGP23515 440 aa6.95□□□□□ -1.3
PALB2-202ENST00000561514 PAX6P26367 422 aa6.95□□□□□ -1.3
PALB2-202ENST00000561514 GGT2P36268 569 aa6.95□□□□□ -1.3
PALB2-202ENST00000561514 PROK1P58294 105 aa6.95□□□□□ -1.3
PALB2-202ENST00000561514 KRTAP10-3P60369 221 aa6.95□□□□□ -1.3
PALB2-202ENST00000561514 PDCD1Q15116 288 aa6.95□□□□□ -1.3
PALB2-202ENST00000561514 MPPED2Q15777 294 aa6.95□□□□□ -1.3
PALB2-202ENST00000561514 MEP1BQ16820 701 aa6.95□□□□□ -1.3
PALB2-202ENST00000561514 TMEM95Q3KNT9 176 aa6.95□□□□□ -1.3
PALB2-202ENST00000561514 AARDQ4LEZ3 155 aa6.95□□□□□ -1.3
PALB2-202ENST00000561514 FAM98BQ52LJ0 330 aaKnown RBP6.95□□□□□ -1.3
PALB2-202ENST00000561514 CD276Q5ZPR3 534 aa6.95□□□□□ -1.3
PALB2-202ENST00000561514 LAMTOR1Q6IAA8 161 aa6.95□□□□□ -1.3
PALB2-202ENST00000561514 SMARCD3Q6STE5 483 aa6.95□□□□□ -1.3
PALB2-202ENST00000561514 ZNF620Q6ZNG0 422 aa6.95□□□□□ -1.3
PALB2-202ENST00000561514 CYP4Z1Q86W10 505 aa6.95□□□□□ -1.3
PALB2-202ENST00000561514 OR6V1Q8N148 313 aa6.95□□□□□ -1.3
PALB2-202ENST00000561514 BHLHE23Q8NDY6 225 aa6.95□□□□□ -1.3
PALB2-202ENST00000561514 DUSP18Q8NEJ0 188 aa6.95□□□□□ -1.3
PALB2-202ENST00000561514 OR11L1Q8NGX0 322 aa6.95□□□□□ -1.3
PALB2-202ENST00000561514 FBLIM1Q8WUP2 373 aa6.95□□□□□ -1.3
PALB2-202ENST00000561514 ST8SIA2Q92186 375 aa6.95□□□□□ -1.3
PALB2-202ENST00000561514 DYRK2Q92630 601 aa6.95□□□□□ -1.3
PALB2-202ENST00000561514 Q96MT0 163 aa6.95□□□□□ -1.3
PALB2-202ENST00000561514 TSSK2Q96PF2 358 aa6.95□□□□□ -1.3
PALB2-202ENST00000561514 FYTTD1Q96QD9 318 aaKnown RBP6.95□□□□□ -1.3
PALB2-202ENST00000561514 SIRPDQ9H106 197 aa6.95□□□□□ -1.3
PALB2-202ENST00000561514 DUSP21Q9H596 190 aa6.95□□□□□ -1.3
PALB2-202ENST00000561514 TRIM36Q9NQ86 728 aa6.95□□□□□ -1.3
PALB2-202ENST00000561514 PLCXD1Q9NUJ7 323 aa6.95□□□□□ -1.3
PALB2-202ENST00000561514 SDHAF2Q9NX18 166 aa6.95□□□□□ -1.3
PALB2-202ENST00000561514 RNF7Q9UBF6 113 aa6.95□□□□□ -1.3
PALB2-202ENST00000561514 KAAG1Q9UBP8 84 aa6.95□□□□□ -1.3
PALB2-202ENST00000561514 NUFIP1Q9UHK0 495 aaKnown RBP6.95□□□□□ -1.3
PALB2-202ENST00000561514 TBC1D24Q9ULP9 559 aa6.95□□□□□ -1.3
PALB2-202ENST00000561514 OAZ3Q9UMX2 235 aa6.95□□□□□ -1.3
PALB2-202ENST00000561514 POLR1DQ9Y2S0 133 aa6.95□□□□□ -1.3
PALB2-202ENST00000561514 ORC6Q9Y5N6 252 aa6.95□□□□□ -1.3
PALB2-202ENST00000561514 UNC119BA6NIH7 251 aa6.94□□□□□ -1.3
PALB2-202ENST00000561514 CD300LBA8K4G0 201 aa6.94□□□□□ -1.3
PALB2-202ENST00000561514 M0QZ24 198 aa6.94□□□□□ -1.3
PALB2-202ENST00000561514 AIPO00170 330 aa6.94□□□□□ -1.3
PALB2-202ENST00000561514 TIMM23O14925 209 aa6.94□□□□□ -1.3
PALB2-202ENST00000561514 SLC16A6O15403 523 aa6.94□□□□□ -1.3
PALB2-202ENST00000561514 AIREO43918 545 aa6.94□□□□□ -1.3
PALB2-202ENST00000561514 NDUFS6O75380 124 aaKnown RBP6.94□□□□□ -1.3
PALB2-202ENST00000561514 LHBP01229 141 aa6.94□□□□□ -1.3
PALB2-202ENST00000561514 CLUP10909 449 aa6.94□□□□□ -1.3
PALB2-202ENST00000561514 IRF2P14316 349 aa6.94□□□□□ -1.3
PALB2-202ENST00000561514 ANOS1P23352 680 aa6.94□□□□□ -1.3
PALB2-202ENST00000561514 SLC7A2P52569 658 aa6.94□□□□□ -1.3
PALB2-202ENST00000561514 SRSF4Q08170 494 aaKnown RBP6.94□□□□□ -1.3
PALB2-202ENST00000561514 DDI2Q5TDH0 399 aa6.94□□□□□ -1.3
PALB2-202ENST00000561514 PRAMEF6Q5VXH4 476 aa6.94□□□□□ -1.3
PALB2-202ENST00000561514 NXNL2Q5VZ03 156 aa6.94□□□□□ -1.3
PALB2-202ENST00000561514 TEX36Q5VZQ5 186 aa6.94□□□□□ -1.3
PALB2-202ENST00000561514 ASPHD2Q6ICH7 369 aa6.94□□□□□ -1.3
PALB2-202ENST00000561514 LIN54Q6MZP7 749 aa6.94□□□□□ -1.3
PALB2-202ENST00000561514 METAP1DQ6UB28 335 aaPredicted RBP6.94□□□□□ -1.3
PALB2-202ENST00000561514 GDPGP1Q6ZNW5 385 aa6.94□□□□□ -1.3
PALB2-202ENST00000561514 C17orf107Q6ZR85 190 aa6.94□□□□□ -1.3
PALB2-202ENST00000561514 SHFQ7M4L6 423 aa6.94□□□□□ -1.3
PALB2-202ENST00000561514 SNX29P2Q8IUI4 249 aa6.94□□□□□ -1.3
PALB2-202ENST00000561514 OR8H2Q8N162 312 aa6.94□□□□□ -1.3
PALB2-202ENST00000561514 KIR3DL3Q8N743 410 aa6.94□□□□□ -1.3
PALB2-202ENST00000561514 SLC24A4Q8NFF2 622 aa6.94□□□□□ -1.3
PALB2-202ENST00000561514 DMBX1Q8NFW5 382 aa6.94□□□□□ -1.3
PALB2-202ENST00000561514 LINC01006Q8NI28 216 aa6.94□□□□□ -1.3
PALB2-202ENST00000561514 ZNF431Q8TF32 576 aaPredicted RBP6.94□□□□□ -1.3
PALB2-202ENST00000561514 GATAD2BQ8WXI9 593 aa6.94□□□□□ -1.3
PALB2-202ENST00000561514 RFKQ969G6 155 aa6.94□□□□□ -1.3
PALB2-202ENST00000561514 CMTM3Q96MX0 182 aa6.94□□□□□ -1.3
PALB2-202ENST00000561514 ERMAPQ96PL5 475 aaPredicted RBP6.94□□□□□ -1.3
PALB2-202ENST00000561514 DDOQ99489 341 aa6.94□□□□□ -1.3
PALB2-202ENST00000561514 SSX3Q99909 188 aa6.94□□□□□ -1.3
PALB2-202ENST00000561514 ATF6BQ99941 703 aa6.94□□□□□ -1.3
PALB2-202ENST00000561514 RBM4BQ9BQ04 359 aaKnown RBP6.94□□□□□ -1.3
PALB2-202ENST00000561514 METTL9Q9H1A3 318 aa6.94□□□□□ -1.3
PALB2-202ENST00000561514 MIXL1Q9H2W2 232 aa6.94□□□□□ -1.3
PALB2-202ENST00000561514 WDR76Q9H967 626 aa6.94□□□□□ -1.3
PALB2-202ENST00000561514 FN3KRPQ9HA64 309 aa6.94□□□□□ -1.3
PALB2-202ENST00000561514 SMURF1Q9HCE7 757 aa6.94□□□□□ -1.3
PALB2-202ENST00000561514 IL1RAPQ9NPH3 570 aa6.94□□□□□ -1.3
PALB2-202ENST00000561514 MRPL22Q9NWU5 206 aaKnown RBP6.94□□□□□ -1.3
PALB2-202ENST00000561514 MRPL15Q9P015 296 aaKnown RBP6.94□□□□□ -1.3
PALB2-202ENST00000561514 SCP2D1Q9UJQ7 156 aa6.94□□□□□ -1.3
PALB2-202ENST00000561514 TRAV38-1A0A0B4J264 116 aa6.93□□□□□ -1.3
PALB2-202ENST00000561514 IGHV1-69DA0A0B4J2H0 117 aa6.93□□□□□ -1.3
PALB2-202ENST00000561514 IGHV3-64DA0A0J9YX35 117 aa6.93□□□□□ -1.3
PALB2-202ENST00000561514 OOEPA6NGQ2 149 aa6.93□□□□□ -1.3
PALB2-202ENST00000561514 SLC22A31A6NKX4 558 aa6.93□□□□□ -1.3
PALB2-202ENST00000561514 M0R135 149 aa6.93□□□□□ -1.3
PALB2-202ENST00000561514 DNASE2O00115 360 aaPredicted RBP6.93□□□□□ -1.3
PALB2-202ENST00000561514 RGS10O43665 173 aa6.93□□□□□ -1.3
PALB2-202ENST00000561514 GPR137BO60478 399 aa6.93□□□□□ -1.3
PALB2-202ENST00000561514 TOX4O94842 621 aa6.93□□□□□ -1.3
PALB2-202ENST00000561514 IGHV1-69P01742 117 aa6.93□□□□□ -1.3
PALB2-202ENST00000561514 HLA-DQB1P01920 261 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms