RNA–Protein interactions for RNA: ENST00000560540.5

SHF-207, Transcript of Src homology 2 domain containing F, humanhuman

TSL 5 BASIC

Gene SHF, Length 2,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-207ENST00000560540 FBXO9Q9UK97 447 aaPredicted RBP21.41■■□□□ 1.02
SHF-207ENST00000560540 KCNIP3Q9Y2W7 256 aa21.41■■□□□ 1.02
SHF-207ENST00000560540 ID4P47928 161 aa21.4■■□□□ 1.02
SHF-207ENST00000560540 TRIP6Q15654 476 aaKnown RBP21.4■■□□□ 1.02
SHF-207ENST00000560540 RNF212Q495C1 297 aa21.4■■□□□ 1.02
SHF-207ENST00000560540 ZFP82Q8N141 532 aa21.4■■□□□ 1.02
SHF-207ENST00000560540 LRTM2Q8N967 370 aa21.4■■□□□ 1.02
SHF-207ENST00000560540 AGBL5Q8NDL9 886 aa21.4■■□□□ 1.02
SHF-207ENST00000560540 HDHD3Q9BSH5 251 aaPredicted RBP21.4■■□□□ 1.02
SHF-207ENST00000560540 NAA60Q9H7X0 242 aa21.4■■□□□ 1.02
SHF-207ENST00000560540 RARRES3Q9UL19 164 aa21.4■■□□□ 1.02
SHF-207ENST00000560540 CHCHD2Q9Y6H1 151 aaPredicted RBP21.4■■□□□ 1.02
SHF-207ENST00000560540 CNOT1A5YKK6 2376 aaKnown RBP21.4■■□□□ 1.02
SHF-207ENST00000560540 TSPAN15O95858 294 aa21.4■■□□□ 1.02
SHF-207ENST00000560540 TMEM225BP0DP42 221 aa21.4■■□□□ 1.02
SHF-207ENST00000560540 PTAFRP25105 342 aa21.4■■□□□ 1.02
SHF-207ENST00000560540 SUCLG1P53597 346 aaKnown RBP21.4■■□□□ 1.02
SHF-207ENST00000560540 SPTSSAQ969W0 71 aa21.4■■□□□ 1.02
SHF-207ENST00000560540 DEFB126Q9BYW3 111 aa21.4■■□□□ 1.02
SHF-207ENST00000560540 SMIM3Q9BZL3 60 aa21.4■■□□□ 1.02
SHF-207ENST00000560540 METTL9Q9H1A3 318 aa21.4■■□□□ 1.02
SHF-207ENST00000560540 TP53I11O14683 189 aa21.39■■□□□ 1.01
SHF-207ENST00000560540 VAMP5O95183 116 aa21.39■■□□□ 1.01
SHF-207ENST00000560540 CYC1P08574 325 aa21.39■■□□□ 1.01
SHF-207ENST00000560540 SNCAP37840 140 aa21.39■■□□□ 1.01
SHF-207ENST00000560540 PIGPP57054 158 aa21.39■■□□□ 1.01
SHF-207ENST00000560540 TMEM187Q14656 261 aa21.39■■□□□ 1.01
SHF-207ENST00000560540 DHRS13Q6UX07 377 aa21.39■■□□□ 1.01
SHF-207ENST00000560540 TMEM123Q8N131 208 aa21.39■■□□□ 1.01
SHF-207ENST00000560540 ERGIC1Q969X5 290 aa21.39■■□□□ 1.01
SHF-207ENST00000560540 KIAA1549Q9HCM3 1950 aa21.39■■□□□ 1.01
SHF-207ENST00000560540 PTPRZ1P23471 2315 aaPredicted RBP21.39■■□□□ 1.01
SHF-207ENST00000560540 BORCS7-ASMTA0A0B4J1R7 106 aa21.38■■□□□ 1.01
SHF-207ENST00000560540 PROB1E7EW31 1015 aa21.38■■□□□ 1.01
SHF-207ENST00000560540 DHHO43323 396 aa21.38■■□□□ 1.01
SHF-207ENST00000560540 EIF1BO60739 113 aaKnown RBP21.38■■□□□ 1.01
SHF-207ENST00000560540 MBPP02686 304 aaPredicted RBP21.38■■□□□ 1.01
SHF-207ENST00000560540 DANCRP0C864 163 aa21.38■■□□□ 1.01
SHF-207ENST00000560540 SECTM1Q8WVN6 248 aa21.38■■□□□ 1.01
SHF-207ENST00000560540 C14orf79Q96F83 325 aa21.38■■□□□ 1.01
SHF-207ENST00000560540 GINS3Q9BRX5 216 aa21.38■■□□□ 1.01
SHF-207ENST00000560540 SUCNR1Q9BXA5 334 aa21.38■■□□□ 1.01
SHF-207ENST00000560540 TUBA4BQ9H853 241 aa21.38■■□□□ 1.01
SHF-207ENST00000560540 GPR137BO60478 399 aa21.38■■□□□ 1.01
SHF-207ENST00000560540 SCGB1D2O95969 90 aa21.38■■□□□ 1.01
SHF-207ENST00000560540 CD63P08962 238 aa21.38■■□□□ 1.01
SHF-207ENST00000560540 ZNF728P0DKX0 622 aa21.38■■□□□ 1.01
SHF-207ENST00000560540 HGFACQ04756 655 aa21.38■■□□□ 1.01
SHF-207ENST00000560540 GPR157Q5UAW9 335 aa21.38■■□□□ 1.01
SHF-207ENST00000560540 PPP1R3BQ86XI6 285 aa21.38■■□□□ 1.01
SHF-207ENST00000560540 HIST1H2BAQ96A08 127 aa21.38■■□□□ 1.01
SHF-207ENST00000560540 LIME1Q9H400 295 aa21.38■■□□□ 1.01
SHF-207ENST00000560540 AK3Q9UIJ7 227 aa21.38■■□□□ 1.01
SHF-207ENST00000560540 EML6Q6ZMW3 1958 aa21.38■■□□□ 1.01
SHF-207ENST00000560540 CEP250Q9BV73 2442 aa21.37■■□□□ 1.01
SHF-207ENST00000560540 C1orf196B1AJZ1 125 aa21.37■■□□□ 1.01
SHF-207ENST00000560540 PPT1P50897 306 aa21.37■■□□□ 1.01
SHF-207ENST00000560540 MTCP1P56278 107 aa21.37■■□□□ 1.01
SHF-207ENST00000560540 LRRC18Q8N456 261 aa21.37■■□□□ 1.01
SHF-207ENST00000560540 INTS12Q96CB8 462 aaKnown RBP21.37■■□□□ 1.01
SHF-207ENST00000560540 CLCC1Q96S66 551 aa21.37■■□□□ 1.01
SHF-207ENST00000560540 SCRT1Q9BWW7 348 aa21.37■■□□□ 1.01
SHF-207ENST00000560540 LUZP4Q9P127 313 aa21.37■■□□□ 1.01
SHF-207ENST00000560540 KNTC1P50748 2209 aa21.37■■□□□ 1.01
SHF-207ENST00000560540 PRSS44E7EML9 344 aa21.36■■□□□ 1.01
SHF-207ENST00000560540 NPIPA2E9PIF3 369 aa21.36■■□□□ 1.01
SHF-207ENST00000560540 NPIPA3F8WFD2 350 aa21.36■■□□□ 1.01
SHF-207ENST00000560540 H7C1Q1 480 aa21.36■■□□□ 1.01
SHF-207ENST00000560540 P2RY1P47900 373 aa21.36■■□□□ 1.01
SHF-207ENST00000560540 MIDNQ504T8 468 aa21.36■■□□□ 1.01
SHF-207ENST00000560540 PRAMEF20Q5VT98 475 aa21.36■■□□□ 1.01
SHF-207ENST00000560540 SLC39A7Q92504 469 aa21.36■■□□□ 1.01
SHF-207ENST00000560540 ZNF385AQ96PM9 386 aaKnown RBP21.36■■□□□ 1.01
SHF-207ENST00000560540 GPR173Q9NS66 373 aa21.36■■□□□ 1.01
SHF-207ENST00000560540 PLEK2Q9NYT0 353 aa21.36■■□□□ 1.01
SHF-207ENST00000560540 MT-ND4LP03901 98 aa21.36■■□□□ 1.01
SHF-207ENST00000560540 RAB5CP51148 216 aa21.36■■□□□ 1.01
SHF-207ENST00000560540 SNAI3Q3KNW1 292 aa21.36■■□□□ 1.01
SHF-207ENST00000560540 CDCP2Q5VXM1 449 aa21.36■■□□□ 1.01
SHF-207ENST00000560540 LCN10Q6JVE6 187 aa21.36■■□□□ 1.01
SHF-207ENST00000560540 SGK3Q96BR1 496 aa21.36■■□□□ 1.01
SHF-207ENST00000560540 FOXD3Q9UJU5 478 aaPredicted RBP21.36■■□□□ 1.01
SHF-207ENST00000560540 DBHP09172 617 aa21.35■■□□□ 1.01
SHF-207ENST00000560540 OR5AC1P0C628 307 aa21.35■■□□□ 1.01
SHF-207ENST00000560540 IL13RA2Q14627 380 aa21.35■■□□□ 1.01
SHF-207ENST00000560540 RSU1Q15404 277 aa21.35■■□□□ 1.01
SHF-207ENST00000560540 CNN3Q15417 329 aaKnown RBP21.35■■□□□ 1.01
SHF-207ENST00000560540 ABCA11PQ4W5N1 156 aa21.35■■□□□ 1.01
SHF-207ENST00000560540 RTN4IP1Q8WWV3 396 aaPredicted RBP21.35■■□□□ 1.01
SHF-207ENST00000560540 C18orf12Q96KH6 178 aa21.35■■□□□ 1.01
SHF-207ENST00000560540 NAA11Q9BSU3 229 aaPredicted RBP21.35■■□□□ 1.01
SHF-207ENST00000560540 FAAP24Q9BTP7 215 aa21.35■■□□□ 1.01
SHF-207ENST00000560540 RPS10P5Q9NQ39 176 aa21.35■■□□□ 1.01
SHF-207ENST00000560540 STRAPQ9Y3F4 350 aaKnown RBP21.35■■□□□ 1.01
SHF-207ENST00000560540 SPAARA0A1B0GVQ0 90 aa21.35■■□□□ 1.01
SHF-207ENST00000560540 ZNF850A8MQ14 1090 aa21.35■■□□□ 1.01
SHF-207ENST00000560540 EIF3GO75821 320 aaKnown RBP eCLIP21.35■■□□□ 1.01
SHF-207ENST00000560540 FGF5P12034 268 aa21.35■■□□□ 1.01
SHF-207ENST00000560540 CRYGSP22914 178 aa21.35■■□□□ 1.01
SHF-207ENST00000560540 CHATP28329 748 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms