RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 SUPT4H1P63272 117 aaKnown RBP8.39□□□□□ -1.07
RTF1-206ENST00000560447 TRIP6Q15654 476 aaKnown RBP8.39□□□□□ -1.07
RTF1-206ENST00000560447 SIGIRRQ6IA17 410 aa8.39□□□□□ -1.07
RTF1-206ENST00000560447 PRSS54Q6PEW0 395 aa8.39□□□□□ -1.07
RTF1-206ENST00000560447 SGPP2Q8IWX5 399 aa8.39□□□□□ -1.07
RTF1-206ENST00000560447 TUSC5Q8IXB3 177 aa8.39□□□□□ -1.07
RTF1-206ENST00000560447 MKXQ8IYA7 352 aa8.39□□□□□ -1.07
RTF1-206ENST00000560447 FAM185AQ8N0U4 392 aa8.39□□□□□ -1.07
RTF1-206ENST00000560447 CPEB3Q8NE35 698 aaKnown RBP8.39□□□□□ -1.07
RTF1-206ENST00000560447 OR5A2Q8NGI9 324 aa8.39□□□□□ -1.07
RTF1-206ENST00000560447 OR10K1Q8NGX5 313 aa8.39□□□□□ -1.07
RTF1-206ENST00000560447 FGFBP3Q8TAT2 258 aa8.39□□□□□ -1.07
RTF1-206ENST00000560447 CASTOR1Q8WTX7 329 aa8.39□□□□□ -1.07
RTF1-206ENST00000560447 GALNT14Q96FL9 552 aa8.39□□□□□ -1.07
RTF1-206ENST00000560447 POM121L2Q96KW2 1035 aa8.39□□□□□ -1.07
RTF1-206ENST00000560447 ARPC5LQ9BPX5 153 aa8.39□□□□□ -1.07
RTF1-206ENST00000560447 SLX1AQ9BQ83 275 aa8.39□□□□□ -1.07
RTF1-206ENST00000560447 SUCNR1Q9BXA5 334 aa8.39□□□□□ -1.07
RTF1-206ENST00000560447 SPACA1Q9HBV2 294 aa8.39□□□□□ -1.07
RTF1-206ENST00000560447 RDH8Q9NYR8 311 aa8.39□□□□□ -1.07
RTF1-206ENST00000560447 IL17BQ9UHF5 180 aa8.39□□□□□ -1.07
RTF1-206ENST00000560447 KCNIP3Q9Y2W7 256 aa8.39□□□□□ -1.07
RTF1-206ENST00000560447 MFSD2BA6NFX1 497 aa8.38□□□□□ -1.07
RTF1-206ENST00000560447 CRYM-AS1A6NIL9 109 aa8.38□□□□□ -1.07
RTF1-206ENST00000560447 OR5B21A6NL26 309 aa8.38□□□□□ -1.07
RTF1-206ENST00000560447 FAM166BA8MTA8 275 aa8.38□□□□□ -1.07
RTF1-206ENST00000560447 CDRT15L2A8MXV6 281 aa8.38□□□□□ -1.07
RTF1-206ENST00000560447 F8VVB4 439 aa8.38□□□□□ -1.07
RTF1-206ENST00000560447 F8VWA3 439 aa8.38□□□□□ -1.07
RTF1-206ENST00000560447 TAAR5O14804 337 aa8.38□□□□□ -1.07
RTF1-206ENST00000560447 CNOT4O95628 575 aaKnown RBP8.38□□□□□ -1.07
RTF1-206ENST00000560447 IFNA2P01563 188 aa8.38□□□□□ -1.07
RTF1-206ENST00000560447 OR5H8P0DN80 308 aa8.38□□□□□ -1.07
RTF1-206ENST00000560447 PGAM2P15259 253 aa8.38□□□□□ -1.07
RTF1-206ENST00000560447 GLP1RP43220 463 aa8.38□□□□□ -1.07
RTF1-206ENST00000560447 SRPXP78539 464 aa8.38□□□□□ -1.07
RTF1-206ENST00000560447 IL15RAQ13261 267 aa8.38□□□□□ -1.07
RTF1-206ENST00000560447 CEACAM21Q3KPI0 293 aa8.38□□□□□ -1.07
RTF1-206ENST00000560447 LINC00696Q6ZRV3 163 aa8.38□□□□□ -1.07
RTF1-206ENST00000560447 KCTD9Q7L273 389 aa8.38□□□□□ -1.07
RTF1-206ENST00000560447 MRPL21Q7Z2W9 205 aaKnown RBP8.38□□□□□ -1.07
RTF1-206ENST00000560447 C6orf201Q7Z4U5 140 aa8.38□□□□□ -1.07
RTF1-206ENST00000560447 ZDHHC23Q8IYP9 409 aa8.38□□□□□ -1.07
RTF1-206ENST00000560447 LRTM2Q8N967 370 aa8.38□□□□□ -1.07
RTF1-206ENST00000560447 CCDC71LQ8N9Z2 235 aa8.38□□□□□ -1.07
RTF1-206ENST00000560447 OR10AD1Q8NGE0 317 aa8.38□□□□□ -1.07
RTF1-206ENST00000560447 OR51F2Q8NH61 342 aa8.38□□□□□ -1.07
RTF1-206ENST00000560447 FNDC9Q8TBE3 224 aa8.38□□□□□ -1.07
RTF1-206ENST00000560447 PIGCQ92535 297 aa8.38□□□□□ -1.07
RTF1-206ENST00000560447 WBP1Q96G27 269 aa8.38□□□□□ -1.07
RTF1-206ENST00000560447 BOD1Q96IK1 185 aa8.38□□□□□ -1.07
RTF1-206ENST00000560447 AQP10Q96PS8 301 aa8.38□□□□□ -1.07
RTF1-206ENST00000560447 SYT3Q9BQG1 590 aa8.38□□□□□ -1.07
RTF1-206ENST00000560447 REG4Q9BYZ8 158 aa8.38□□□□□ -1.07
RTF1-206ENST00000560447 RIMS4Q9H426 269 aaPredicted RBP8.38□□□□□ -1.07
RTF1-206ENST00000560447 CALHM2Q9HA72 323 aa8.38□□□□□ -1.07
RTF1-206ENST00000560447 C12orf4Q9NQ89 552 aa8.38□□□□□ -1.07
RTF1-206ENST00000560447 ZNF701Q9NV72 531 aaPredicted RBP8.38□□□□□ -1.07
RTF1-206ENST00000560447 GLS2Q9UI32 602 aa8.38□□□□□ -1.07
RTF1-206ENST00000560447 ZNF230Q9UIE0 474 aaPredicted RBP8.38□□□□□ -1.07
RTF1-206ENST00000560447 AK3Q9UIJ7 227 aa8.38□□□□□ -1.07
RTF1-206ENST00000560447 ST3GAL6Q9Y274 331 aa8.38□□□□□ -1.07
RTF1-206ENST00000560447 LOC100509620A0A075B734 347 aa8.37□□□□□ -1.07
RTF1-206ENST00000560447 TRGV5A0A0B4J1U4 118 aa8.37□□□□□ -1.07
RTF1-206ENST00000560447 IGKV1-12A0A0C4DH73 117 aa8.37□□□□□ -1.07
RTF1-206ENST00000560447 A8MXK9 166 aa8.37□□□□□ -1.07
RTF1-206ENST00000560447 FAM25EA8MYX2 175 aa8.37□□□□□ -1.07
RTF1-206ENST00000560447 EEF1E1-BLOC1S5C9J1V9 151 aa8.37□□□□□ -1.07
RTF1-206ENST00000560447 CCSO14618 274 aa8.37□□□□□ -1.07
RTF1-206ENST00000560447 SPRY1O43609 319 aaPredicted RBP8.37□□□□□ -1.07
RTF1-206ENST00000560447 ANGPTL7O43827 346 aa8.37□□□□□ -1.07
RTF1-206ENST00000560447 CRYZL1O95825 349 aa8.37□□□□□ -1.07
RTF1-206ENST00000560447 IFNA21P01568 189 aa8.37□□□□□ -1.07
RTF1-206ENST00000560447 IGKV1D-12P01611 117 aa8.37□□□□□ -1.07
RTF1-206ENST00000560447 IGHG3P01860 377 aa8.37□□□□□ -1.07
RTF1-206ENST00000560447 FGF2P09038 288 aa8.37□□□□□ -1.07
RTF1-206ENST00000560447 CELA3AP09093 270 aa8.37□□□□□ -1.07
RTF1-206ENST00000560447 CTXN2P0C2S0 81 aa8.37□□□□□ -1.07
RTF1-206ENST00000560447 PATE4P0C8F1 98 aa8.37□□□□□ -1.07
RTF1-206ENST00000560447 LIPCP11150 499 aa8.37□□□□□ -1.07
RTF1-206ENST00000560447 TPT1P13693 172 aaKnown RBP8.37□□□□□ -1.07
RTF1-206ENST00000560447 APLNRP35414 380 aa8.37□□□□□ -1.07
RTF1-206ENST00000560447 FGF12P61328 243 aa8.37□□□□□ -1.07
RTF1-206ENST00000560447 RAB1AP62820 205 aa8.37□□□□□ -1.07
RTF1-206ENST00000560447 SRYQ05066 204 aa8.37□□□□□ -1.07
RTF1-206ENST00000560447 PRDX4Q13162 271 aa8.37□□□□□ -1.07
RTF1-206ENST00000560447 IL13RA2Q14627 380 aa8.37□□□□□ -1.07
RTF1-206ENST00000560447 TAF9Q16594 264 aa8.37□□□□□ -1.07
RTF1-206ENST00000560447 PAN3Q58A45 887 aaKnown RBP8.37□□□□□ -1.07
RTF1-206ENST00000560447 ZNF766Q5HY98 468 aa8.37□□□□□ -1.07
RTF1-206ENST00000560447 NKAPLQ5M9Q1 402 aa8.37□□□□□ -1.07
RTF1-206ENST00000560447 FBXW9Q5XUX1 488 aa8.37□□□□□ -1.07
RTF1-206ENST00000560447 IGFL2Q6UWQ7 119 aa8.37□□□□□ -1.07
RTF1-206ENST00000560447 ALKAL2Q6UX46 152 aa8.37□□□□□ -1.07
RTF1-206ENST00000560447 NUFIP2Q7Z417 695 aaKnown RBP8.37□□□□□ -1.07
RTF1-206ENST00000560447 RTN4RL2Q86UN3 420 aa8.37□□□□□ -1.07
RTF1-206ENST00000560447 SLC38A6Q8IZM9 456 aa8.37□□□□□ -1.07
RTF1-206ENST00000560447 FBXL14Q8N1E6 418 aa8.37□□□□□ -1.07
RTF1-206ENST00000560447 ZNF611Q8N823 705 aa8.37□□□□□ -1.07
RTF1-206ENST00000560447 POC1AQ8NBT0 407 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms