RNA–Protein interactions for RNA: ENST00000559974.5

RABGGTA-212, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,963 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-212ENST00000559974 AK3Q9UIJ7 227 aa12.5□□□□□ -0.41
RABGGTA-212ENST00000559974 LIPGQ9Y5X9 500 aa12.5□□□□□ -0.41
RABGGTA-212ENST00000559974 CHATP28329 748 aa12.5□□□□□ -0.41
RABGGTA-212ENST00000559974 ECI1P42126 302 aa12.5□□□□□ -0.41
RABGGTA-212ENST00000559974 ARPC4P59998 168 aa12.5□□□□□ -0.41
RABGGTA-212ENST00000559974 SUPT4H1P63272 117 aaKnown RBP12.5□□□□□ -0.41
RABGGTA-212ENST00000559974 SLC9A3R2Q15599 337 aa12.5□□□□□ -0.41
RABGGTA-212ENST00000559974 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.5□□□□□ -0.41
RABGGTA-212ENST00000559974 MCEMP1Q8IX19 187 aa12.5□□□□□ -0.41
RABGGTA-212ENST00000559974 THAP6Q8TBB0 222 aa12.5□□□□□ -0.41
RABGGTA-212ENST00000559974 NMES1Q9C002 83 aa12.5□□□□□ -0.41
RABGGTA-212ENST00000559974 ANXA10Q9UJ72 324 aa12.5□□□□□ -0.41
RABGGTA-212ENST00000559974 C13orf42A0A1B0GVH6 325 aa12.49□□□□□ -0.41
RABGGTA-212ENST00000559974 MSTNO14793 375 aa12.49□□□□□ -0.41
RABGGTA-212ENST00000559974 GEMIN2O14893 280 aaKnown RBP12.49□□□□□ -0.41
RABGGTA-212ENST00000559974 SPDEFO95238 335 aa12.49□□□□□ -0.41
RABGGTA-212ENST00000559974 CRHP06850 196 aa12.49□□□□□ -0.41
RABGGTA-212ENST00000559974 NMBP08949 121 aa12.49□□□□□ -0.41
RABGGTA-212ENST00000559974 CCNOP22674 350 aa12.49□□□□□ -0.41
RABGGTA-212ENST00000559974 DTYMKP23919 212 aa12.49□□□□□ -0.41
RABGGTA-212ENST00000559974 UBA52P62987 128 aaKnown RBP12.49□□□□□ -0.41
RABGGTA-212ENST00000559974 AANATQ16613 207 aa12.49□□□□□ -0.41
RABGGTA-212ENST00000559974 PIGYQ3MUY2 71 aa12.49□□□□□ -0.41
RABGGTA-212ENST00000559974 ACOT7LQ6ZUV0 252 aa12.49□□□□□ -0.41
RABGGTA-212ENST00000559974 NAXEQ8NCW5 288 aa12.49□□□□□ -0.41
RABGGTA-212ENST00000559974 COQ8AQ8NI60 647 aa12.49□□□□□ -0.41
RABGGTA-212ENST00000559974 CMSS1Q9BQ75 279 aaKnown RBP12.49□□□□□ -0.41
RABGGTA-212ENST00000559974 REPIN1Q9BWE0 567 aaKnown RBP12.49□□□□□ -0.41
RABGGTA-212ENST00000559974 RAB18Q9NP72 206 aa12.49□□□□□ -0.41
RABGGTA-212ENST00000559974 PCDHB16Q9NRJ7 776 aa12.49□□□□□ -0.41
RABGGTA-212ENST00000559974 ZNF581Q9P0T4 197 aa12.49□□□□□ -0.41
RABGGTA-212ENST00000559974 KCNMB2Q9Y691 235 aa12.49□□□□□ -0.41
RABGGTA-212ENST00000559974 MED12LQ86YW9 2145 aa12.49□□□□□ -0.41
RABGGTA-212ENST00000559974 KANTRA0A1W2PQU2 76 aa12.49□□□□□ -0.41
RABGGTA-212ENST00000559974 C5orf49A4QMS7 147 aa12.49□□□□□ -0.41
RABGGTA-212ENST00000559974 RNF222A6NCQ9 220 aa12.49□□□□□ -0.41
RABGGTA-212ENST00000559974 ZNF503-AS2A6NEH8 195 aa12.49□□□□□ -0.41
RABGGTA-212ENST00000559974 ZNF850A8MQ14 1090 aa12.49□□□□□ -0.41
RABGGTA-212ENST00000559974 I3L521 148 aa12.49□□□□□ -0.41
RABGGTA-212ENST00000559974 PDGFAP04085 211 aa12.49□□□□□ -0.41
RABGGTA-212ENST00000559974 SFTPBP07988 381 aa12.49□□□□□ -0.41
RABGGTA-212ENST00000559974 GLRA1P23415 457 aa12.49□□□□□ -0.41
RABGGTA-212ENST00000559974 CCL11P51671 97 aa12.49□□□□□ -0.41
RABGGTA-212ENST00000559974 ARG2P78540 354 aa12.49□□□□□ -0.41
RABGGTA-212ENST00000559974 CYCSP99999 105 aaKnown RBP12.49□□□□□ -0.41
RABGGTA-212ENST00000559974 ATXN7L3Q14CW9 347 aaPredicted RBP12.49□□□□□ -0.41
RABGGTA-212ENST00000559974 NUFIP2Q7Z417 695 aaKnown RBP12.49□□□□□ -0.41
RABGGTA-212ENST00000559974 CCDC28AQ8IWP9 274 aa12.49□□□□□ -0.41
RABGGTA-212ENST00000559974 FBXL14Q8N1E6 418 aa12.49□□□□□ -0.41
RABGGTA-212ENST00000559974 OR10AD1Q8NGE0 317 aa12.49□□□□□ -0.41
RABGGTA-212ENST00000559974 OR51F2Q8NH61 342 aa12.49□□□□□ -0.41
RABGGTA-212ENST00000559974 VRK1Q99986 396 aaPredicted RBP12.49□□□□□ -0.41
RABGGTA-212ENST00000559974 SULT4A1Q9BR01 284 aa12.49□□□□□ -0.41
RABGGTA-212ENST00000559974 LDAHQ9H6V9 325 aa12.49□□□□□ -0.41
RABGGTA-212ENST00000559974 CHMP1AQ9HD42 196 aaPredicted RBP12.49□□□□□ -0.41
RABGGTA-212ENST00000559974 C14orf166Q9Y224 244 aaKnown RBP12.49□□□□□ -0.41
RABGGTA-212ENST00000559974 ST3GAL6Q9Y274 331 aa12.49□□□□□ -0.41
RABGGTA-212ENST00000559974 BCL2L11O43521 198 aa12.48□□□□□ -0.41
RABGGTA-212ENST00000559974 FCGR3AP08637 254 aa12.48□□□□□ -0.41
RABGGTA-212ENST00000559974 CD79AP11912 226 aa12.48□□□□□ -0.41
RABGGTA-212ENST00000559974 CCL2P13500 99 aa12.48□□□□□ -0.41
RABGGTA-212ENST00000559974 PGAM2P15259 253 aa12.48□□□□□ -0.41
RABGGTA-212ENST00000559974 RPS2P15880 293 aaKnown RBP12.48□□□□□ -0.41
RABGGTA-212ENST00000559974 PSMB6P28072 239 aa12.48□□□□□ -0.41
RABGGTA-212ENST00000559974 ARR3P36575 388 aa12.48□□□□□ -0.41
RABGGTA-212ENST00000559974 ANKRD55Q3KP44 614 aa12.48□□□□□ -0.41
RABGGTA-212ENST00000559974 ZNF766Q5HY98 468 aa12.48□□□□□ -0.41
RABGGTA-212ENST00000559974 CALHM1Q8IU99 346 aa12.48□□□□□ -0.41
RABGGTA-212ENST00000559974 FDCSPQ8NFU4 85 aa12.48□□□□□ -0.41
RABGGTA-212ENST00000559974 OR56B2PQ8NGI1 322 aa12.48□□□□□ -0.41
RABGGTA-212ENST00000559974 OR5M9Q8NGP3 310 aa12.48□□□□□ -0.41
RABGGTA-212ENST00000559974 ST8SIA2Q92186 375 aa12.48□□□□□ -0.41
RABGGTA-212ENST00000559974 APOBEC3DQ96AK3 386 aaPredicted RBP12.48□□□□□ -0.41
RABGGTA-212ENST00000559974 ZNF2Q9BSG1 426 aaPredicted RBP12.48□□□□□ -0.41
RABGGTA-212ENST00000559974 DEFB127Q9H1M4 99 aa12.48□□□□□ -0.41
RABGGTA-212ENST00000559974 MED9Q9NWA0 146 aa12.48□□□□□ -0.41
RABGGTA-212ENST00000559974 MBD2Q9UBB5 411 aa12.48□□□□□ -0.41
RABGGTA-212ENST00000559974 GPR160Q9UJ42 338 aa12.48□□□□□ -0.41
RABGGTA-212ENST00000559974 SMG1Q96Q15 3661 aaKnown RBP12.48□□□□□ -0.41
RABGGTA-212ENST00000559974 hCG_1807616A0A1W2PRN6 198 aa12.47□□□□□ -0.41
RABGGTA-212ENST00000559974 RLN2P04090 185 aa12.47□□□□□ -0.41
RABGGTA-212ENST00000559974 RRADP55042 308 aa12.47□□□□□ -0.41
RABGGTA-212ENST00000559974 RAB1AP62820 205 aa12.47□□□□□ -0.41
RABGGTA-212ENST00000559974 MALLQ13021 153 aa12.47□□□□□ -0.41
RABGGTA-212ENST00000559974 RGS7BPQ6MZT1 257 aaPredicted RBP12.47□□□□□ -0.41
RABGGTA-212ENST00000559974 ZNF611Q8N823 705 aa12.47□□□□□ -0.41
RABGGTA-212ENST00000559974 TMEM178AQ8NBL3 297 aa12.47□□□□□ -0.41
RABGGTA-212ENST00000559974 WBP1Q96G27 269 aa12.47□□□□□ -0.41
RABGGTA-212ENST00000559974 CXorf58Q96LI9 332 aa12.47□□□□□ -0.41
RABGGTA-212ENST00000559974 PAPOLGQ9BWT3 736 aaKnown RBP12.47□□□□□ -0.41
RABGGTA-212ENST00000559974 CSAG2Q9Y5P2 127 aa12.47□□□□□ -0.41
RABGGTA-212ENST00000559974 POM121CA8CG34 1229 aa12.47□□□□□ -0.41
RABGGTA-212ENST00000559974 K7EM74 188 aa12.47□□□□□ -0.41
RABGGTA-212ENST00000559974 K7ENP7 123 aa12.47□□□□□ -0.41
RABGGTA-212ENST00000559974 ADAP1O75689 374 aa12.47□□□□□ -0.41
RABGGTA-212ENST00000559974 RBM11P57052 281 aaKnown RBP12.47□□□□□ -0.41
RABGGTA-212ENST00000559974 SOX8P57073 446 aa12.47□□□□□ -0.41
RABGGTA-212ENST00000559974 INO80CQ6PI98 192 aaPredicted RBP12.47□□□□□ -0.41
RABGGTA-212ENST00000559974 SLC25A26Q70HW3 274 aa12.47□□□□□ -0.41
RABGGTA-212ENST00000559974 MRPL21Q7Z2W9 205 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms