RNA–Protein interactions for RNA: ENST00000559849.5

CHRNB4-204, Transcript of cholinergic receptor nicotinic beta 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNB4, Length 2,080 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4-204ENST00000559849 SLC25A26Q70HW3 274 aa11.34□□□□□ -0.59
CHRNB4-204ENST00000559849 BTN2A1Q7KYR7 527 aa11.34□□□□□ -0.59
CHRNB4-204ENST00000559849 C1QL2Q7Z5L3 287 aa11.34□□□□□ -0.59
CHRNB4-204ENST00000559849 PNLDC1Q8NA58 520 aaKnown RBP11.34□□□□□ -0.59
CHRNB4-204ENST00000559849 ST8SIA4Q92187 359 aa11.34□□□□□ -0.59
CHRNB4-204ENST00000559849 RGP1Q92546 391 aaPredicted RBP11.34□□□□□ -0.59
CHRNB4-204ENST00000559849 TMEM106AQ96A25 262 aa11.34□□□□□ -0.59
CHRNB4-204ENST00000559849 CEP19Q96LK0 163 aa11.34□□□□□ -0.59
CHRNB4-204ENST00000559849 DUSP21Q9H596 190 aa11.34□□□□□ -0.59
CHRNB4-204ENST00000559849 A0A1B0GW55 424 aa11.33□□□□□ -0.6
CHRNB4-204ENST00000559849 RFPL4AA6NLU0 287 aa11.33□□□□□ -0.6
CHRNB4-204ENST00000559849 C22orf46C9J442 243 aa11.33□□□□□ -0.6
CHRNB4-204ENST00000559849 RFPL4AL1F8VTS6 287 aa11.33□□□□□ -0.6
CHRNB4-204ENST00000559849 FCN3O75636 299 aa11.33□□□□□ -0.6
CHRNB4-204ENST00000559849 PLATP00750 562 aa11.33□□□□□ -0.6
CHRNB4-204ENST00000559849 DUX4L2P0CJ85 424 aa11.33□□□□□ -0.6
CHRNB4-204ENST00000559849 DUX4L3P0CJ86 424 aa11.33□□□□□ -0.6
CHRNB4-204ENST00000559849 DUX4L4P0CJ87 422 aa11.33□□□□□ -0.6
CHRNB4-204ENST00000559849 DUX4L5P0CJ88 424 aa11.33□□□□□ -0.6
CHRNB4-204ENST00000559849 DUX4L6P0CJ89 424 aa11.33□□□□□ -0.6
CHRNB4-204ENST00000559849 DUX4L7P0CJ90 424 aa11.33□□□□□ -0.6
CHRNB4-204ENST00000559849 ADRA2CP18825 462 aa11.33□□□□□ -0.6
CHRNB4-204ENST00000559849 SOX2P48431 317 aa11.33□□□□□ -0.6
CHRNB4-204ENST00000559849 YIF1BQ5BJH7 314 aa11.33□□□□□ -0.6
CHRNB4-204ENST00000559849 DUX4L9Q6RFH8 374 aaPredicted RBP11.33□□□□□ -0.6
CHRNB4-204ENST00000559849 SDSLQ96GA7 329 aa11.33□□□□□ -0.6
CHRNB4-204ENST00000559849 GAFA1Q96PS6 74 aa11.33□□□□□ -0.6
CHRNB4-204ENST00000559849 ARPC5LQ9BPX5 153 aa11.33□□□□□ -0.6
CHRNB4-204ENST00000559849 MND1Q9BWT6 205 aa11.33□□□□□ -0.6
CHRNB4-204ENST00000559849 PAK1IP1Q9NWT1 392 aaPredicted RBP11.33□□□□□ -0.6
CHRNB4-204ENST00000559849 DUX4Q9UBX2 424 aa11.33□□□□□ -0.6
CHRNB4-204ENST00000559849 ZNF222Q9UK12 451 aa11.33□□□□□ -0.6
CHRNB4-204ENST00000559849 CELP19835 753 aa11.32□□□□□ -0.6
CHRNB4-204ENST00000559849 RAB3AP20336 220 aa11.32□□□□□ -0.6
CHRNB4-204ENST00000559849 PRDX2P32119 198 aa11.32□□□□□ -0.6
CHRNB4-204ENST00000559849 GABARAPL2P60520 117 aa11.32□□□□□ -0.6
CHRNB4-204ENST00000559849 BDH1Q02338 343 aa11.32□□□□□ -0.6
CHRNB4-204ENST00000559849 PDZK1IP1Q13113 114 aa11.32□□□□□ -0.6
CHRNB4-204ENST00000559849 ZNF773Q6PK81 442 aa11.32□□□□□ -0.6
CHRNB4-204ENST00000559849 Q8IYB0 196 aa11.32□□□□□ -0.6
CHRNB4-204ENST00000559849 ZFP41Q8N8Y5 198 aa11.32□□□□□ -0.6
CHRNB4-204ENST00000559849 SLAMF9Q96A28 289 aa11.32□□□□□ -0.6
CHRNB4-204ENST00000559849 PGLYRP3Q96LB9 341 aa11.32□□□□□ -0.6
CHRNB4-204ENST00000559849 DMRTB1Q96MA1 342 aa11.32□□□□□ -0.6
CHRNB4-204ENST00000559849 SLC25A10Q9UBX3 287 aaPredicted RBP11.32□□□□□ -0.6
CHRNB4-204ENST00000559849 MAB21L2Q9Y586 359 aa11.32□□□□□ -0.6
CHRNB4-204ENST00000559849 MAGEB3O15480 346 aa11.32□□□□□ -0.6
CHRNB4-204ENST00000559849 INMTO95050 263 aa11.32□□□□□ -0.6
CHRNB4-204ENST00000559849 CD1AP06126 327 aa11.32□□□□□ -0.6
CHRNB4-204ENST00000559849 HCKP08631 526 aa11.32□□□□□ -0.6
CHRNB4-204ENST00000559849 ALDH3B2P48448 385 aa11.32□□□□□ -0.6
CHRNB4-204ENST00000559849 POU3F4P49335 361 aa11.32□□□□□ -0.6
CHRNB4-204ENST00000559849 CAV3P56539 151 aa11.32□□□□□ -0.6
CHRNB4-204ENST00000559849 ACSM1Q08AH1 577 aa11.32□□□□□ -0.6
CHRNB4-204ENST00000559849 SPHARQ15513 63 aa11.32□□□□□ -0.6
CHRNB4-204ENST00000559849 DGUOKQ16854 277 aa11.32□□□□□ -0.6
CHRNB4-204ENST00000559849 ARMCX4Q5H9R4 360 aa11.32□□□□□ -0.6
CHRNB4-204ENST00000559849 ZNF529Q6P280 563 aa11.32□□□□□ -0.6
CHRNB4-204ENST00000559849 BATF2Q8N1L9 274 aa11.32□□□□□ -0.6
CHRNB4-204ENST00000559849 ZNRF1Q8ND25 227 aa11.32□□□□□ -0.6
CHRNB4-204ENST00000559849 CNTD2Q9H8S5 307 aa11.32□□□□□ -0.6
CHRNB4-204ENST00000559849 RPUSD1Q9UJJ7 312 aaKnown RBP11.32□□□□□ -0.6
CHRNB4-204ENST00000559849 F8VVB4 439 aa11.31□□□□□ -0.6
CHRNB4-204ENST00000559849 F8VWA3 439 aa11.31□□□□□ -0.6
CHRNB4-204ENST00000559849 RGS10O43665 173 aa11.31□□□□□ -0.6
CHRNB4-204ENST00000559849 KNG1P01042 644 aa11.31□□□□□ -0.6
CHRNB4-204ENST00000559849 TFF1P04155 84 aa11.31□□□□□ -0.6
CHRNB4-204ENST00000559849 KISS1Q15726 138 aa11.31□□□□□ -0.6
CHRNB4-204ENST00000559849 Q499Y3 187 aa11.31□□□□□ -0.6
CHRNB4-204ENST00000559849 THOC7Q6I9Y2 204 aaKnown RBP11.31□□□□□ -0.6
CHRNB4-204ENST00000559849 ZNF561Q8N587 486 aa11.31□□□□□ -0.6
CHRNB4-204ENST00000559849 CD177Q8N6Q3 437 aa11.31□□□□□ -0.6
CHRNB4-204ENST00000559849 SGCDQ92629 289 aa11.31□□□□□ -0.6
CHRNB4-204ENST00000559849 CPNE2Q96FN4 548 aaPredicted RBP11.31□□□□□ -0.6
CHRNB4-204ENST00000559849 SPACA5Q96QH8 159 aa11.31□□□□□ -0.6
CHRNB4-204ENST00000559849 TRBV5-5A0A0J9YX44 114 aa11.31□□□□□ -0.6
CHRNB4-204ENST00000559849 PNMA8CA0A1B0GUJ8 204 aa11.31□□□□□ -0.6
CHRNB4-204ENST00000559849 ZNF879B4DU55 563 aa11.31□□□□□ -0.6
CHRNB4-204ENST00000559849 SPRY1O43609 319 aaPredicted RBP11.31□□□□□ -0.6
CHRNB4-204ENST00000559849 FSHBP01225 129 aa11.31□□□□□ -0.6
CHRNB4-204ENST00000559849 SELLP14151 372 aa11.31□□□□□ -0.6
CHRNB4-204ENST00000559849 NDUFB7P17568 137 aa11.31□□□□□ -0.6
CHRNB4-204ENST00000559849 EPHA1P21709 976 aa11.31□□□□□ -0.6
CHRNB4-204ENST00000559849 RPS11P62280 158 aaKnown RBP eCLIP11.31□□□□□ -0.6
CHRNB4-204ENST00000559849 FGFRL1Q8N441 504 aa11.31□□□□□ -0.6
CHRNB4-204ENST00000559849 RFT1Q96AA3 541 aa11.31□□□□□ -0.6
CHRNB4-204ENST00000559849 UPRTQ96BW1 309 aa11.31□□□□□ -0.6
CHRNB4-204ENST00000559849 DCTN5Q9BTE1 182 aa11.31□□□□□ -0.6
CHRNB4-204ENST00000559849 OR14J1Q9UGF5 321 aa11.31□□□□□ -0.6
CHRNB4-204ENST00000559849 NAT1P18440 290 aa11.3□□□□□ -0.6
CHRNB4-204ENST00000559849 NPBWR2P48146 333 aa11.3□□□□□ -0.6
CHRNB4-204ENST00000559849 FGF12P61328 243 aa11.3□□□□□ -0.6
CHRNB4-204ENST00000559849 IRF3Q14653 427 aa11.3□□□□□ -0.6
CHRNB4-204ENST00000559849 MED22Q15528 200 aa11.3□□□□□ -0.6
CHRNB4-204ENST00000559849 ASPHD2Q6ICH7 369 aa11.3□□□□□ -0.6
CHRNB4-204ENST00000559849 FIP1L1Q6UN15 594 aaKnown RBP11.3□□□□□ -0.6
CHRNB4-204ENST00000559849 Q6ZNX1 250 aa11.3□□□□□ -0.6
CHRNB4-204ENST00000559849 SAXO1Q8IYX7 474 aa11.3□□□□□ -0.6
CHRNB4-204ENST00000559849 FAM58AQ8N1B3 248 aa11.3□□□□□ -0.6
CHRNB4-204ENST00000559849 ZSCAN4Q8NAM6 433 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms