RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 SLC25A16P16260 332 aa12.38□□□□□ -0.43
SNRPA1-207ENST00000559309 BCL3P20749 454 aa12.38□□□□□ -0.43
SNRPA1-207ENST00000559309 CPT2P23786 658 aa12.38□□□□□ -0.43
SNRPA1-207ENST00000559309 MDH2P40926 338 aaKnown RBP12.38□□□□□ -0.43
SNRPA1-207ENST00000559309 POU3F4P49335 361 aa12.38□□□□□ -0.43
SNRPA1-207ENST00000559309 SPCS2Q15005 226 aa12.38□□□□□ -0.43
SNRPA1-207ENST00000559309 FOXB2Q5VYV0 432 aa12.38□□□□□ -0.43
SNRPA1-207ENST00000559309 SFXN4Q6P4A7 337 aa12.38□□□□□ -0.43
SNRPA1-207ENST00000559309 CLEC2AQ6UVW9 174 aa12.38□□□□□ -0.43
SNRPA1-207ENST00000559309 PNLDC1Q8NA58 520 aaKnown RBP12.38□□□□□ -0.43
SNRPA1-207ENST00000559309 SEH1LQ96EE3 360 aa12.38□□□□□ -0.43
SNRPA1-207ENST00000559309 POM121Q96HA1 1249 aa12.38□□□□□ -0.43
SNRPA1-207ENST00000559309 C1orf159Q96HA4 380 aa12.38□□□□□ -0.43
SNRPA1-207ENST00000559309 BARHL1Q9BZE3 327 aa12.38□□□□□ -0.43
SNRPA1-207ENST00000559309 BPESC1Q9GZL8 116 aa12.38□□□□□ -0.43
SNRPA1-207ENST00000559309 DNTTIP1Q9H147 329 aa12.38□□□□□ -0.43
SNRPA1-207ENST00000559309 SMURF1Q9HCE7 757 aa12.38□□□□□ -0.43
SNRPA1-207ENST00000559309 RBFOX1Q9NWB1 397 aaKnown RBP12.38□□□□□ -0.43
SNRPA1-207ENST00000559309 STEAP1Q9UHE8 339 aa12.38□□□□□ -0.43
SNRPA1-207ENST00000559309 MRPS28Q9Y2Q9 187 aaKnown RBP12.38□□□□□ -0.43
SNRPA1-207ENST00000559309 DPPA5A6NC42 116 aa12.37□□□□□ -0.43
SNRPA1-207ENST00000559309 TRAPPC2LH3BP13 241 aa12.37□□□□□ -0.43
SNRPA1-207ENST00000559309 FCN3O75636 299 aa12.37□□□□□ -0.43
SNRPA1-207ENST00000559309 BPNT1O95861 308 aa12.37□□□□□ -0.43
SNRPA1-207ENST00000559309 KNG1P01042 644 aa12.37□□□□□ -0.43
SNRPA1-207ENST00000559309 TMEM225BP0DP42 221 aa12.37□□□□□ -0.43
SNRPA1-207ENST00000559309 IRF2P14316 349 aa12.37□□□□□ -0.43
SNRPA1-207ENST00000559309 GLRA1P23415 457 aa12.37□□□□□ -0.43
SNRPA1-207ENST00000559309 LMO1P25800 156 aa12.37□□□□□ -0.43
SNRPA1-207ENST00000559309 CD80P33681 288 aa12.37□□□□□ -0.43
SNRPA1-207ENST00000559309 GPR6P46095 362 aaPredicted RBP12.37□□□□□ -0.43
SNRPA1-207ENST00000559309 BMXP51813 675 aa12.37□□□□□ -0.43
SNRPA1-207ENST00000559309 SCAND1P57086 179 aa12.37□□□□□ -0.43
SNRPA1-207ENST00000559309 FGF12P61328 243 aa12.37□□□□□ -0.43
SNRPA1-207ENST00000559309 LMO4P61968 165 aa12.37□□□□□ -0.43
SNRPA1-207ENST00000559309 UNC119Q13432 240 aa12.37□□□□□ -0.43
SNRPA1-207ENST00000559309 GLIPR1L1Q6UWM5 242 aa12.37□□□□□ -0.43
SNRPA1-207ENST00000559309 ZNF788Q6ZQV5 615 aa12.37□□□□□ -0.43
SNRPA1-207ENST00000559309 USP43Q70EL4 1123 aa12.37□□□□□ -0.43
SNRPA1-207ENST00000559309 FAM58AQ8N1B3 248 aa12.37□□□□□ -0.43
SNRPA1-207ENST00000559309 NDNFQ8TB73 568 aa12.37□□□□□ -0.43
SNRPA1-207ENST00000559309 DYNC2LI1Q8TCX1 351 aa12.37□□□□□ -0.43
SNRPA1-207ENST00000559309 RAB1CQ92928 201 aa12.37□□□□□ -0.43
SNRPA1-207ENST00000559309 MRPS24Q96EL2 167 aaKnown RBP12.37□□□□□ -0.43
SNRPA1-207ENST00000559309 SDSLQ96GA7 329 aa12.37□□□□□ -0.43
SNRPA1-207ENST00000559309 GPER1Q99527 375 aa12.37□□□□□ -0.43
SNRPA1-207ENST00000559309 TMEM246Q9BRR3 403 aa12.37□□□□□ -0.43
SNRPA1-207ENST00000559309 PIMREGQ9BSJ6 248 aa12.37□□□□□ -0.43
SNRPA1-207ENST00000559309 IFT22Q9H7X7 185 aa12.37□□□□□ -0.43
SNRPA1-207ENST00000559309 NDUFA13Q9P0J0 144 aa12.37□□□□□ -0.43
SNRPA1-207ENST00000559309 IL36RNQ9UBH0 155 aa12.37□□□□□ -0.43
SNRPA1-207ENST00000559309 YLPM1P49750 1951 aaKnown RBP12.37□□□□□ -0.43
SNRPA1-207ENST00000559309 TRAV38-1A0A0B4J264 116 aa12.36□□□□□ -0.43
SNRPA1-207ENST00000559309 A0A1W2PP11 408 aa12.36□□□□□ -0.43
SNRPA1-207ENST00000559309 hCG_1807616A0A1W2PRN6 198 aa12.36□□□□□ -0.43
SNRPA1-207ENST00000559309 FOXI3A8MTJ6 420 aaPredicted RBP12.36□□□□□ -0.43
SNRPA1-207ENST00000559309 NDUFA2O43678 99 aa12.36□□□□□ -0.43
SNRPA1-207ENST00000559309 CYB5AP00167 134 aa12.36□□□□□ -0.43
SNRPA1-207ENST00000559309 PLATP00750 562 aa12.36□□□□□ -0.43
SNRPA1-207ENST00000559309 PSG2P11465 335 aa12.36□□□□□ -0.43
SNRPA1-207ENST00000559309 ART1P52961 327 aa12.36□□□□□ -0.43
SNRPA1-207ENST00000559309 CAV3P56539 151 aa12.36□□□□□ -0.43
SNRPA1-207ENST00000559309 DYNC1I2Q13409 638 aaKnown RBP12.36□□□□□ -0.43
SNRPA1-207ENST00000559309 GPR176Q14439 515 aa12.36□□□□□ -0.43
SNRPA1-207ENST00000559309 IL13RA2Q14627 380 aa12.36□□□□□ -0.43
SNRPA1-207ENST00000559309 SMIM21Q3B7S5 101 aa12.36□□□□□ -0.43
SNRPA1-207ENST00000559309 SPIN3Q5JUX0 258 aa12.36□□□□□ -0.43
SNRPA1-207ENST00000559309 Q6P435 159 aa12.36□□□□□ -0.43
SNRPA1-207ENST00000559309 ZNF841Q6ZN19 808 aa12.36□□□□□ -0.43
SNRPA1-207ENST00000559309 DCDC5Q6ZRR9 648 aa12.36□□□□□ -0.43
SNRPA1-207ENST00000559309 OR2W3Q7Z3T1 314 aa12.36□□□□□ -0.43
SNRPA1-207ENST00000559309 CROCCP3Q8IVE0 287 aa12.36□□□□□ -0.43
SNRPA1-207ENST00000559309 MUC20Q8N307 709 aaPredicted RBP12.36□□□□□ -0.43
SNRPA1-207ENST00000559309 TMEM104Q8NE00 496 aa12.36□□□□□ -0.43
SNRPA1-207ENST00000559309 WFDC11Q8NEX6 87 aa12.36□□□□□ -0.43
SNRPA1-207ENST00000559309 PTX4Q96A99 478 aa12.36□□□□□ -0.43
SNRPA1-207ENST00000559309 TM2D1Q9BX74 207 aa12.36□□□□□ -0.43
SNRPA1-207ENST00000559309 METTL9Q9H1A3 318 aa12.36□□□□□ -0.43
SNRPA1-207ENST00000559309 DCSTAMPQ9H295 470 aa12.36□□□□□ -0.43
SNRPA1-207ENST00000559309 NLKQ9UBE8 527 aa12.36□□□□□ -0.43
SNRPA1-207ENST00000559309 CR1P17927 2039 aa12.36□□□□□ -0.43
SNRPA1-207ENST00000559309 ABCA2Q9BZC7 2435 aa12.36□□□□□ -0.43
SNRPA1-207ENST00000559309 IGHV4-61A0A0C4DH41 118 aa12.35□□□□□ -0.43
SNRPA1-207ENST00000559309 OR2AT4A6NND4 320 aa12.35□□□□□ -0.43
SNRPA1-207ENST00000559309 PPIHO43447 177 aaKnown RBP12.35□□□□□ -0.43
SNRPA1-207ENST00000559309 NXPH2O95156 264 aa12.35□□□□□ -0.43
SNRPA1-207ENST00000559309 SLC2A2P11168 524 aaPredicted RBP12.35□□□□□ -0.43
SNRPA1-207ENST00000559309 CAPZA1P52907 286 aa12.35□□□□□ -0.43
SNRPA1-207ENST00000559309 MXD1Q05195 221 aa12.35□□□□□ -0.43
SNRPA1-207ENST00000559309 LOXL1Q08397 574 aaPredicted RBP12.35□□□□□ -0.43
SNRPA1-207ENST00000559309 RAB11BQ15907 218 aa12.35□□□□□ -0.43
SNRPA1-207ENST00000559309 MICBQ29980 383 aa12.35□□□□□ -0.43
SNRPA1-207ENST00000559309 AVPI1Q5T686 147 aa12.35□□□□□ -0.43
SNRPA1-207ENST00000559309 AWAT2Q6E213 333 aa12.35□□□□□ -0.43
SNRPA1-207ENST00000559309 BIVMQ86UB2 503 aa12.35□□□□□ -0.43
SNRPA1-207ENST00000559309 FAM89BQ8N5H3 189 aa12.35□□□□□ -0.43
SNRPA1-207ENST00000559309 CD177Q8N6Q3 437 aa12.35□□□□□ -0.43
SNRPA1-207ENST00000559309 C19orf18Q8NEA5 215 aa12.35□□□□□ -0.43
SNRPA1-207ENST00000559309 FAM3DQ96BQ1 224 aa12.35□□□□□ -0.43
SNRPA1-207ENST00000559309 TIMD4Q96H15 378 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms