RNA–Protein interactions for RNA: ENST00000558731.1

CSPG4P5-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 5, humanhuman

BASIC

Gene CSPG4P5, Length 3,730 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5-201ENST00000558731 C13orf42A0A1B0GVH6 325 aa9.34□□□□□ -0.91
CSPG4P5-201ENST00000558731 SFTPBP07988 381 aa9.34□□□□□ -0.91
CSPG4P5-201ENST00000558731 CHRM2P08172 466 aa9.34□□□□□ -0.91
CSPG4P5-201ENST00000558731 NFYAP23511 347 aaPredicted RBP9.34□□□□□ -0.91
CSPG4P5-201ENST00000558731 NPBWR2P48146 333 aa9.34□□□□□ -0.91
CSPG4P5-201ENST00000558731 SCAND1P57086 179 aa9.34□□□□□ -0.91
CSPG4P5-201ENST00000558731 RTP5Q14D33 572 aa9.34□□□□□ -0.91
CSPG4P5-201ENST00000558731 METTL11BQ5VVY1 283 aa9.34□□□□□ -0.91
CSPG4P5-201ENST00000558731 MYPOPQ86VE0 399 aaPredicted RBP9.34□□□□□ -0.91
CSPG4P5-201ENST00000558731 SPACA3Q8IXA5 215 aa9.34□□□□□ -0.91
CSPG4P5-201ENST00000558731 C17orf78Q8N4C9 275 aa9.34□□□□□ -0.91
CSPG4P5-201ENST00000558731 STEAP2Q8NFT2 490 aa9.34□□□□□ -0.91
CSPG4P5-201ENST00000558731 CMSS1Q9BQ75 279 aaKnown RBP9.34□□□□□ -0.91
CSPG4P5-201ENST00000558731 TMPRSS13Q9BYE2 586 aa9.34□□□□□ -0.91
CSPG4P5-201ENST00000558731 UFSP2Q9NUQ7 469 aa9.34□□□□□ -0.91
CSPG4P5-201ENST00000558731 PRR13Q9NZ81 148 aa9.34□□□□□ -0.91
CSPG4P5-201ENST00000558731 V9GYS6 101 aa9.34□□□□□ -0.91
CSPG4P5-201ENST00000558731 IGKV1-27A0A075B6S5 117 aa9.34□□□□□ -0.91
CSPG4P5-201ENST00000558731 CD300LBA8K4G0 201 aa9.34□□□□□ -0.91
CSPG4P5-201ENST00000558731 TMEM14DPA8MWL7 114 aa9.34□□□□□ -0.91
CSPG4P5-201ENST00000558731 RRP8O43159 456 aaKnown RBP9.34□□□□□ -0.91
CSPG4P5-201ENST00000558731 LILRA1O75019 489 aa9.34□□□□□ -0.91
CSPG4P5-201ENST00000558731 NDUFB6O95139 128 aa9.34□□□□□ -0.91
CSPG4P5-201ENST00000558731 HLA-AP01891 365 aaKnown RBP9.34□□□□□ -0.91
CSPG4P5-201ENST00000558731 TMEM50BP56557 158 aa9.34□□□□□ -0.91
CSPG4P5-201ENST00000558731 HIST1H3AP68431 136 aa9.34□□□□□ -0.91
CSPG4P5-201ENST00000558731 IGSF11Q5DX21 431 aa9.34□□□□□ -0.91
CSPG4P5-201ENST00000558731 HIST2H3PS2Q5TEC6 136 aa9.34□□□□□ -0.91
CSPG4P5-201ENST00000558731 HIST2H3AQ71DI3 136 aa9.34□□□□□ -0.91
CSPG4P5-201ENST00000558731 LINC00518Q8N0U6 118 aa9.34□□□□□ -0.91
CSPG4P5-201ENST00000558731 RELL2Q8NC24 303 aaPredicted RBP9.34□□□□□ -0.91
CSPG4P5-201ENST00000558731 OR10AD1Q8NGE0 317 aa9.34□□□□□ -0.91
CSPG4P5-201ENST00000558731 LILRB1Q8NHL6 650 aaPredicted RBP9.34□□□□□ -0.91
CSPG4P5-201ENST00000558731 MARCH1Q8TCQ1 289 aa9.34□□□□□ -0.91
CSPG4P5-201ENST00000558731 LINC00470Q9BZP3 86 aa9.34□□□□□ -0.91
CSPG4P5-201ENST00000558731 FAM117AQ9C073 453 aa9.34□□□□□ -0.91
CSPG4P5-201ENST00000558731 ZMAT5Q9UDW3 170 aaKnown RBP9.34□□□□□ -0.91
CSPG4P5-201ENST00000558731 hCG_38984A0A1B0GV85 526 aa9.34□□□□□ -0.91
CSPG4P5-201ENST00000558731 HS3ST1O14792 307 aa9.34□□□□□ -0.91
CSPG4P5-201ENST00000558731 WDR1O75083 606 aa9.34□□□□□ -0.91
CSPG4P5-201ENST00000558731 CTSSP25774 331 aa9.34□□□□□ -0.91
CSPG4P5-201ENST00000558731 ZNF83P51522 516 aa9.34□□□□□ -0.91
CSPG4P5-201ENST00000558731 ZNF133P52736 654 aaPredicted RBP9.34□□□□□ -0.91
CSPG4P5-201ENST00000558731 IKZF1Q13422 519 aa9.34□□□□□ -0.91
CSPG4P5-201ENST00000558731 ZDHHC23Q8IYP9 409 aa9.34□□□□□ -0.91
CSPG4P5-201ENST00000558731 STPG2Q8N412 459 aa9.34□□□□□ -0.91
CSPG4P5-201ENST00000558731 UBALD1Q8TB05 177 aa9.34□□□□□ -0.91
CSPG4P5-201ENST00000558731 SPSB1Q96BD6 273 aa9.34□□□□□ -0.91
CSPG4P5-201ENST00000558731 CPNE2Q96FN4 548 aaPredicted RBP9.34□□□□□ -0.91
CSPG4P5-201ENST00000558731 SEC22AQ96IW7 307 aa9.34□□□□□ -0.91
CSPG4P5-201ENST00000558731 ZNF175Q9Y473 711 aa9.34□□□□□ -0.91
CSPG4P5-201ENST00000558731 MEIKINA0A087WXM9 373 aa9.33□□□□□ -0.92
CSPG4P5-201ENST00000558731 LOC390937A0A1W2PQ73 354 aa9.33□□□□□ -0.92
CSPG4P5-201ENST00000558731 RAB6AP20340 208 aa9.33□□□□□ -0.92
CSPG4P5-201ENST00000558731 CCL1P22362 96 aa9.33□□□□□ -0.92
CSPG4P5-201ENST00000558731 NHLH1Q02575 133 aa9.33□□□□□ -0.92
CSPG4P5-201ENST00000558731 SLC9A3R2Q15599 337 aa9.33□□□□□ -0.92
CSPG4P5-201ENST00000558731 FAM219AQ8IW50 185 aa9.33□□□□□ -0.92
CSPG4P5-201ENST00000558731 RDH5Q92781 318 aa9.33□□□□□ -0.92
CSPG4P5-201ENST00000558731 GLS2Q9UI32 602 aa9.33□□□□□ -0.92
CSPG4P5-201ENST00000558731 EDARQ9UNE0 448 aa9.33□□□□□ -0.92
CSPG4P5-201ENST00000558731 WIPF3A6NGB9 483 aa9.33□□□□□ -0.92
CSPG4P5-201ENST00000558731 UBBP0CG47 229 aa9.33□□□□□ -0.92
CSPG4P5-201ENST00000558731 ZNF44P15621 663 aa9.33□□□□□ -0.92
CSPG4P5-201ENST00000558731 RPS27AP62979 156 aaKnown RBP9.33□□□□□ -0.92
CSPG4P5-201ENST00000558731 TMEM88Q6PEY1 159 aa9.33□□□□□ -0.92
CSPG4P5-201ENST00000558731 TFAP2EQ6VUC0 442 aa9.33□□□□□ -0.92
CSPG4P5-201ENST00000558731 LHFPL2Q6ZUX7 228 aa9.33□□□□□ -0.92
CSPG4P5-201ENST00000558731 LRRC46Q96FV0 321 aa9.33□□□□□ -0.92
CSPG4P5-201ENST00000558731 IL36RNQ9UBH0 155 aa9.33□□□□□ -0.92
CSPG4P5-201ENST00000558731 OR14J1Q9UGF5 321 aa9.33□□□□□ -0.92
CSPG4P5-201ENST00000558731 TRAPPC2LH3BP13 241 aa9.33□□□□□ -0.92
CSPG4P5-201ENST00000558731 B3GALNT1O75752 331 aa9.33□□□□□ -0.92
CSPG4P5-201ENST00000558731 VSIG10L2P0DP72 767 aa9.33□□□□□ -0.92
CSPG4P5-201ENST00000558731 PRF1P14222 555 aa9.33□□□□□ -0.92
CSPG4P5-201ENST00000558731 FUT6P51993 359 aa9.33□□□□□ -0.92
CSPG4P5-201ENST00000558731 FOXRED2Q8IWF2 684 aa9.33□□□□□ -0.92
CSPG4P5-201ENST00000558731 OR10Z1Q8NGY1 313 aa9.33□□□□□ -0.92
CSPG4P5-201ENST00000558731 C7orf66A4D0T2 115 aa9.32□□□□□ -0.92
CSPG4P5-201ENST00000558731 FIGNL2A6NMB9 653 aa9.32□□□□□ -0.92
CSPG4P5-201ENST00000558731 TMEM127O75204 238 aa9.32□□□□□ -0.92
CSPG4P5-201ENST00000558731 CBX5P45973 191 aa9.32□□□□□ -0.92
CSPG4P5-201ENST00000558731 ACSF3Q4G176 576 aaPredicted RBP9.32□□□□□ -0.92
CSPG4P5-201ENST00000558731 MUC20Q8N307 709 aaPredicted RBP9.32□□□□□ -0.92
CSPG4P5-201ENST00000558731 OR5L1Q8NGL2 311 aa9.32□□□□□ -0.92
CSPG4P5-201ENST00000558731 WDR89Q96FK6 387 aaPredicted RBP9.32□□□□□ -0.92
CSPG4P5-201ENST00000558731 TSNAXQ99598 290 aaKnown RBP9.32□□□□□ -0.92
CSPG4P5-201ENST00000558731 USB1Q9BQ65 265 aaKnown RBP9.32□□□□□ -0.92
CSPG4P5-201ENST00000558731 CA10Q9NS85 328 aa9.32□□□□□ -0.92
CSPG4P5-201ENST00000558731 TINAGQ9UJW2 476 aa9.32□□□□□ -0.92
CSPG4P5-201ENST00000558731 CACNA1BQ00975 2339 aa9.32□□□□□ -0.92
CSPG4P5-201ENST00000558731 C5orf51A6NDU8 294 aa9.32□□□□□ -0.92
CSPG4P5-201ENST00000558731 ZNF98A6NK75 572 aa9.32□□□□□ -0.92
CSPG4P5-201ENST00000558731 M0R1B8 84 aa9.32□□□□□ -0.92
CSPG4P5-201ENST00000558731 LDLRAD4O15165 306 aa9.32□□□□□ -0.92
CSPG4P5-201ENST00000558731 SCGNO76038 276 aa9.32□□□□□ -0.92
CSPG4P5-201ENST00000558731 ZNF35P13682 527 aa9.32□□□□□ -0.92
CSPG4P5-201ENST00000558731 BCL3P20749 454 aa9.32□□□□□ -0.92
CSPG4P5-201ENST00000558731 WNT5AP41221 380 aa9.32□□□□□ -0.92
CSPG4P5-201ENST00000558731 IL13RA1P78552 427 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms