RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 IFNGP01579 166 aa3.5□□□□□ -1.85
SPG11-211ENST00000558561 GYPAP02724 150 aa3.5□□□□□ -1.85
SPG11-211ENST00000558561 LYNP07948 512 aa3.5□□□□□ -1.85
SPG11-211ENST00000558561 H2BFMP0C1H6 154 aa3.5□□□□□ -1.85
SPG11-211ENST00000558561 CALCBP10092 127 aa3.5□□□□□ -1.85
SPG11-211ENST00000558561 ZNF3P17036 446 aa3.5□□□□□ -1.85
SPG11-211ENST00000558561 PAX6P26367 422 aa3.5□□□□□ -1.85
SPG11-211ENST00000558561 HOXD3P31249 432 aaPredicted RBP3.5□□□□□ -1.85
SPG11-211ENST00000558561 NANOS2P60321 138 aaKnown RBP3.5□□□□□ -1.85
SPG11-211ENST00000558561 KRTAP10-11P60412 298 aa3.5□□□□□ -1.85
SPG11-211ENST00000558561 CXCR4P61073 352 aa3.5□□□□□ -1.85
SPG11-211ENST00000558561 RPS23P62266 143 aaKnown RBP3.5□□□□□ -1.85
SPG11-211ENST00000558561 ESRRGP62508 458 aa3.5□□□□□ -1.85
SPG11-211ENST00000558561 PAX2Q02962 417 aa3.5□□□□□ -1.85
SPG11-211ENST00000558561 OR8G1Q15617 311 aa3.5□□□□□ -1.85
SPG11-211ENST00000558561 HFEQ30201 348 aa3.5□□□□□ -1.85
SPG11-211ENST00000558561 KRTAP24-1Q3LI83 254 aa3.5□□□□□ -1.85
SPG11-211ENST00000558561 TP53I3Q53FA7 332 aa3.5□□□□□ -1.85
SPG11-211ENST00000558561 ESCO2Q56NI9 601 aa3.5□□□□□ -1.85
SPG11-211ENST00000558561 ZNF684Q5T5D7 378 aa3.5□□□□□ -1.85
SPG11-211ENST00000558561 LAIR2Q6ISS4 152 aa3.5□□□□□ -1.85
SPG11-211ENST00000558561 RPL13AP3Q6NVV1 102 aa3.5□□□□□ -1.85
SPG11-211ENST00000558561 DRAM2Q6UX65 266 aa3.5□□□□□ -1.85
SPG11-211ENST00000558561 PGAP1Q75T13 922 aa3.5□□□□□ -1.85
SPG11-211ENST00000558561 LHFPL3Q86UP9 236 aa3.5□□□□□ -1.85
SPG11-211ENST00000558561 NOXA1Q86UR1 476 aa3.5□□□□□ -1.85
SPG11-211ENST00000558561 PHC2Q8IXK0 858 aa3.5□□□□□ -1.85
SPG11-211ENST00000558561 SLC35F2Q8IXU6 374 aa3.5□□□□□ -1.85
SPG11-211ENST00000558561 PARP8Q8N3A8 854 aa3.5□□□□□ -1.85
SPG11-211ENST00000558561 PRSS35Q8N3Z0 413 aa3.5□□□□□ -1.85
SPG11-211ENST00000558561 GCSAMQ8N6F7 178 aa3.5□□□□□ -1.85
SPG11-211ENST00000558561 OR13G1Q8NGZ3 307 aa3.5□□□□□ -1.85
SPG11-211ENST00000558561 OR10AC1Q8NH08 325 aa3.5□□□□□ -1.85
SPG11-211ENST00000558561 OR51E1Q8TCB6 317 aa3.5□□□□□ -1.85
SPG11-211ENST00000558561 APH1BQ8WW43 257 aa3.5□□□□□ -1.85
SPG11-211ENST00000558561 SPRYD4Q8WW59 207 aaPredicted RBP3.5□□□□□ -1.85
SPG11-211ENST00000558561 TMEM186Q96B77 213 aa3.5□□□□□ -1.85
SPG11-211ENST00000558561 ORAI1Q96D31 301 aa3.5□□□□□ -1.85
SPG11-211ENST00000558561 REEP6Q96HR9 211 aa3.5□□□□□ -1.85
SPG11-211ENST00000558561 PGAM5Q96HS1 289 aa3.5□□□□□ -1.85
SPG11-211ENST00000558561 OR8B4Q96RC9 309 aa3.5□□□□□ -1.85
SPG11-211ENST00000558561 NKX3-1Q99801 234 aaPredicted RBP3.5□□□□□ -1.85
SPG11-211ENST00000558561 BEX2Q9BXY8 128 aa3.5□□□□□ -1.85
SPG11-211ENST00000558561 PBOV1Q9GZY1 135 aa3.5□□□□□ -1.85
SPG11-211ENST00000558561 GABARAPL1Q9H0R8 117 aa3.5□□□□□ -1.85
SPG11-211ENST00000558561 MMADHCQ9H3L0 296 aaPredicted RBP3.5□□□□□ -1.85
SPG11-211ENST00000558561 ZNF665Q9H7R5 613 aa3.5□□□□□ -1.85
SPG11-211ENST00000558561 NIPAL2Q9H841 368 aa3.5□□□□□ -1.85
SPG11-211ENST00000558561 ISG20L2Q9H9L3 353 aaKnown RBP3.5□□□□□ -1.85
SPG11-211ENST00000558561 ZNF556Q9HAH1 456 aa3.5□□□□□ -1.85
SPG11-211ENST00000558561 PATZ1Q9HBE1 687 aaKnown RBP3.5□□□□□ -1.85
SPG11-211ENST00000558561 FAM118AQ9NWS6 357 aa3.5□□□□□ -1.85
SPG11-211ENST00000558561 C1orf123Q9NWV4 160 aa3.5□□□□□ -1.85
SPG11-211ENST00000558561 FAM206AQ9NX38 181 aa3.5□□□□□ -1.85
SPG11-211ENST00000558561 CTSZQ9UBR2 303 aa3.5□□□□□ -1.85
SPG11-211ENST00000558561 IL19Q9UHD0 177 aa3.5□□□□□ -1.85
SPG11-211ENST00000558561 PPP1R3CQ9UQK1 317 aa3.5□□□□□ -1.85
SPG11-211ENST00000558561 ATRQ13535 2644 aa3.5□□□□□ -1.85
SPG11-211ENST00000558561 IGKV1-27A0A075B6S5 117 aa3.49□□□□□ -1.85
SPG11-211ENST00000558561 MDFIC2A0A1B0GVS7 189 aa3.49□□□□□ -1.85
SPG11-211ENST00000558561 TMEM269A0A1B0GVZ9 245 aa3.49□□□□□ -1.85
SPG11-211ENST00000558561 CEACAM18A8MTB9 384 aa3.49□□□□□ -1.85
SPG11-211ENST00000558561 CLDN25C9JDP6 229 aa3.49□□□□□ -1.85
SPG11-211ENST00000558561 ZNF878C9JN71 531 aa3.49□□□□□ -1.85
SPG11-211ENST00000558561 F5H0A9 414 aaPredicted RBP3.49□□□□□ -1.85
SPG11-211ENST00000558561 J3KRW8 73 aa3.49□□□□□ -1.85
SPG11-211ENST00000558561 J3QRE1 110 aa3.49□□□□□ -1.85
SPG11-211ENST00000558561 LDLRAD4O15165 306 aa3.49□□□□□ -1.85
SPG11-211ENST00000558561 AKR7A2O43488 359 aa3.49□□□□□ -1.85
SPG11-211ENST00000558561 SYNGR1O43759 233 aa3.49□□□□□ -1.85
SPG11-211ENST00000558561 WBP4O75554 376 aaKnown RBP3.49□□□□□ -1.85
SPG11-211ENST00000558561 CIB2O75838 187 aa3.49□□□□□ -1.85
SPG11-211ENST00000558561 LHBP01229 141 aa3.49□□□□□ -1.85
SPG11-211ENST00000558561 IGLV3-1P01715 115 aa3.49□□□□□ -1.85
SPG11-211ENST00000558561 TTRP02766 147 aa3.49□□□□□ -1.85
SPG11-211ENST00000558561 MSMBP08118 114 aa3.49□□□□□ -1.85
SPG11-211ENST00000558561 IGHV4-38-2P0DP08 117 aa3.49□□□□□ -1.85
SPG11-211ENST00000558561 NR2C1P13056 603 aa3.49□□□□□ -1.85
SPG11-211ENST00000558561 CD200P41217 278 aa3.49□□□□□ -1.85
SPG11-211ENST00000558561 KIR3DL2P43630 455 aa3.49□□□□□ -1.85
SPG11-211ENST00000558561 CEBPDP49716 269 aaPredicted RBP3.49□□□□□ -1.85
SPG11-211ENST00000558561 GTF2A1P52655 376 aaPredicted RBP3.49□□□□□ -1.85
SPG11-211ENST00000558561 OR12D2P58182 307 aa3.49□□□□□ -1.85
SPG11-211ENST00000558561 ECH1Q13011 328 aa3.49□□□□□ -1.85
SPG11-211ENST00000558561 ZNF154Q13106 437 aa3.49□□□□□ -1.85
SPG11-211ENST00000558561 PRDX4Q13162 271 aa3.49□□□□□ -1.85
SPG11-211ENST00000558561 MOGQ16653 247 aa3.49□□□□□ -1.85
SPG11-211ENST00000558561 PCGF3Q3KNV8 242 aa3.49□□□□□ -1.85
SPG11-211ENST00000558561 CHRFAM7AQ494W8 412 aa3.49□□□□□ -1.85
SPG11-211ENST00000558561 LIPNQ5VXI9 398 aa3.49□□□□□ -1.85
SPG11-211ENST00000558561 HIST2H2BDQ6DRA6 164 aa3.49□□□□□ -1.85
SPG11-211ENST00000558561 XAF1Q6GPH4 301 aa3.49□□□□□ -1.85
SPG11-211ENST00000558561 FAM166AQ6J272 317 aa3.49□□□□□ -1.85
SPG11-211ENST00000558561 ARL9Q6T311 187 aa3.49□□□□□ -1.85
SPG11-211ENST00000558561 ZNF322Q6U7Q0 402 aaPredicted RBP3.49□□□□□ -1.85
SPG11-211ENST00000558561 MRPL21Q7Z2W9 205 aaKnown RBP3.49□□□□□ -1.85
SPG11-211ENST00000558561 KRT77Q7Z794 578 aa3.49□□□□□ -1.85
SPG11-211ENST00000558561 ANGPTL5Q86XS5 388 aa3.49□□□□□ -1.85
SPG11-211ENST00000558561 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.49□□□□□ -1.85
SPG11-211ENST00000558561 PDZD9Q8IXQ8 264 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms