RNA–Protein interactions for RNA: ENST00000557958.1

LDLR-206, Transcript of low density lipoprotein receptor, humanhuman

TSL 2

Gene LDLR, Length 1,881 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-206ENST00000557958 FAHD2BQ6P2I3 314 aaPredicted RBP14.46□□□□□ -0.09
LDLR-206ENST00000557958 C6orf201Q7Z4U5 140 aa14.46□□□□□ -0.09
LDLR-206ENST00000557958 ZNF573Q86YE8 665 aa14.46□□□□□ -0.09
LDLR-206ENST00000557958 DOLPP1Q86YN1 238 aa14.46□□□□□ -0.09
LDLR-206ENST00000557958 NAXEQ8NCW5 288 aa14.46□□□□□ -0.09
LDLR-206ENST00000557958 OR13C8Q8NGS7 320 aa14.46□□□□□ -0.09
LDLR-206ENST00000557958 HPSE2Q8WWQ2 592 aa14.46□□□□□ -0.09
LDLR-206ENST00000557958 EMG1Q92979 244 aaKnown RBP14.46□□□□□ -0.09
LDLR-206ENST00000557958 STARD4Q96DR4 205 aa14.46□□□□□ -0.09
LDLR-206ENST00000557958 FAHD2AQ96GK7 314 aa14.46□□□□□ -0.09
LDLR-206ENST00000557958 ST6GALNAC5Q9BVH7 336 aa14.46□□□□□ -0.09
LDLR-206ENST00000557958 CHST6Q9GZX3 395 aa14.46□□□□□ -0.09
LDLR-206ENST00000557958 TUBG2Q9NRH3 451 aa14.46□□□□□ -0.09
LDLR-206ENST00000557958 ZNF701Q9NV72 531 aaPredicted RBP14.46□□□□□ -0.09
LDLR-206ENST00000557958 DSPP15924 2871 aaKnown RBP14.46□□□□□ -0.09
LDLR-206ENST00000557958 ZNF732B4DXR9 585 aa14.46□□□□□ -0.1
LDLR-206ENST00000557958 TOXO94900 526 aa14.46□□□□□ -0.1
LDLR-206ENST00000557958 GIPP09681 153 aaPredicted RBP14.46□□□□□ -0.1
LDLR-206ENST00000557958 OR4E1P0C645 316 aa14.46□□□□□ -0.1
LDLR-206ENST00000557958 TIMP3P35625 211 aa14.46□□□□□ -0.1
LDLR-206ENST00000557958 GNG3P63215 75 aa14.46□□□□□ -0.1
LDLR-206ENST00000557958 RBPJQ06330 500 aa14.46□□□□□ -0.1
LDLR-206ENST00000557958 CHRFAM7AQ494W8 412 aa14.46□□□□□ -0.1
LDLR-206ENST00000557958 ELP2Q6IA86 826 aa14.46□□□□□ -0.1
LDLR-206ENST00000557958 RTN4RL2Q86UN3 420 aa14.46□□□□□ -0.1
LDLR-206ENST00000557958 CALHM1Q8IU99 346 aa14.46□□□□□ -0.1
LDLR-206ENST00000557958 BHLHE23Q8NDY6 225 aa14.46□□□□□ -0.1
LDLR-206ENST00000557958 Q8NFD4 153 aa14.46□□□□□ -0.1
LDLR-206ENST00000557958 ASB13Q8WXK3 278 aa14.46□□□□□ -0.1
LDLR-206ENST00000557958 OR5P3Q8WZ94 311 aa14.46□□□□□ -0.1
LDLR-206ENST00000557958 OR51B6Q9H340 312 aa14.46□□□□□ -0.1
LDLR-206ENST00000557958 AMDHD2Q9Y303 409 aa14.46□□□□□ -0.1
LDLR-206ENST00000557958 HSPB11Q9Y547 144 aa14.46□□□□□ -0.1
LDLR-206ENST00000557958 A0A1W2PR80 420 aa14.45□□□□□ -0.1
LDLR-206ENST00000557958 TRAPPC2LH3BP13 241 aa14.45□□□□□ -0.1
LDLR-206ENST00000557958 PDCD6O75340 191 aa14.45□□□□□ -0.1
LDLR-206ENST00000557958 CGAP01215 116 aa14.45□□□□□ -0.1
LDLR-206ENST00000557958 IGKV3-15P01624 115 aa14.45□□□□□ -0.1
LDLR-206ENST00000557958 SFTPBP07988 381 aa14.45□□□□□ -0.1
LDLR-206ENST00000557958 RAC2P15153 192 aa14.45□□□□□ -0.1
LDLR-206ENST00000557958 DTYMKP23919 212 aa14.45□□□□□ -0.1
LDLR-206ENST00000557958 CHATP28329 748 aa14.45□□□□□ -0.1
LDLR-206ENST00000557958 PMELP40967 661 aa14.45□□□□□ -0.1
LDLR-206ENST00000557958 TAS2R31P59538 309 aa14.45□□□□□ -0.1
LDLR-206ENST00000557958 IKZF1Q13422 519 aa14.45□□□□□ -0.1
LDLR-206ENST00000557958 SEZ6L2Q6UXD5 910 aa14.45□□□□□ -0.1
LDLR-206ENST00000557958 CXorf67Q86X51 503 aaPredicted RBP14.45□□□□□ -0.1
LDLR-206ENST00000557958 TERB2Q8NHR7 220 aa14.45□□□□□ -0.1
LDLR-206ENST00000557958 PLK3Q9H4B4 646 aa14.45□□□□□ -0.1
LDLR-206ENST00000557958 DLL4Q9NR61 685 aa14.45□□□□□ -0.1
LDLR-206ENST00000557958 GTF3C1Q12789 2109 aa14.45□□□□□ -0.1
LDLR-206ENST00000557958 GEMIN2O14893 280 aaKnown RBP14.44□□□□□ -0.1
LDLR-206ENST00000557958 CELA3BP08861 270 aa14.44□□□□□ -0.1
LDLR-206ENST00000557958 IL32P24001 234 aa14.44□□□□□ -0.1
LDLR-206ENST00000557958 RAP2BP61225 183 aa14.44□□□□□ -0.1
LDLR-206ENST00000557958 PIGYQ3MUY2 71 aa14.44□□□□□ -0.1
LDLR-206ENST00000557958 BHLHA15Q7RTS1 189 aaPredicted RBP14.44□□□□□ -0.1
LDLR-206ENST00000557958 C1orf174Q8IYL3 243 aa14.44□□□□□ -0.1
LDLR-206ENST00000557958 ZNF610Q8N9Z0 462 aa14.44□□□□□ -0.1
LDLR-206ENST00000557958 OR5AP2Q8NGF4 316 aa14.44□□□□□ -0.1
LDLR-206ENST00000557958 OR52B4Q8NGK2 314 aa14.44□□□□□ -0.1
LDLR-206ENST00000557958 CMSS1Q9BQ75 279 aaKnown RBP14.44□□□□□ -0.1
LDLR-206ENST00000557958 RTL8AQ9BWD3 113 aa14.44□□□□□ -0.1
LDLR-206ENST00000557958 SNAPC5O75971 98 aa14.44□□□□□ -0.1
LDLR-206ENST00000557958 FUT3P21217 361 aa14.44□□□□□ -0.1
LDLR-206ENST00000557958 UCP2P55851 309 aa14.44□□□□□ -0.1
LDLR-206ENST00000557958 P2RX3P56373 397 aa14.44□□□□□ -0.1
LDLR-206ENST00000557958 ARPC4P59998 168 aa14.44□□□□□ -0.1
LDLR-206ENST00000557958 NHLRC3Q5JS37 347 aa14.44□□□□□ -0.1
LDLR-206ENST00000557958 SIGIRRQ6IA17 410 aa14.44□□□□□ -0.1
LDLR-206ENST00000557958 OR2T2Q6IF00 324 aa14.44□□□□□ -0.1
LDLR-206ENST00000557958 SLC25A42Q86VD7 318 aa14.44□□□□□ -0.1
LDLR-206ENST00000557958 MUC20Q8N307 709 aaPredicted RBP14.44□□□□□ -0.1
LDLR-206ENST00000557958 FAM169BQ8N8A8 192 aa14.44□□□□□ -0.1
LDLR-206ENST00000557958 OR10AD1Q8NGE0 317 aa14.44□□□□□ -0.1
LDLR-206ENST00000557958 CNTNAP3BQ96NU0 1288 aa14.44□□□□□ -0.1
LDLR-206ENST00000557958 MICU1Q9BPX6 476 aa14.44□□□□□ -0.1
LDLR-206ENST00000557958 SFXN3Q9BWM7 321 aa14.44□□□□□ -0.1
LDLR-206ENST00000557958 CNTNAP3Q9BZ76 1288 aa14.44□□□□□ -0.1
LDLR-206ENST00000557958 OPN3Q9H1Y3 402 aaPredicted RBP14.44□□□□□ -0.1
LDLR-206ENST00000557958 PPA2Q9H2U2 334 aa14.44□□□□□ -0.1
LDLR-206ENST00000557958 RHOFQ9HBH0 211 aa14.44□□□□□ -0.1
LDLR-206ENST00000557958 SMLR1H3BR10 107 aa14.43□□□□□ -0.1
LDLR-206ENST00000557958 DNASE1P24855 282 aa14.43□□□□□ -0.1
LDLR-206ENST00000557958 ECI1P42126 302 aa14.43□□□□□ -0.1
LDLR-206ENST00000557958 UBE2MP61081 183 aaKnown RBP14.43□□□□□ -0.1
LDLR-206ENST00000557958 FGF12P61328 243 aa14.43□□□□□ -0.1
LDLR-206ENST00000557958 TSC22D1Q15714 1073 aa14.43□□□□□ -0.1
LDLR-206ENST00000557958 MPPED2Q15777 294 aa14.43□□□□□ -0.1
LDLR-206ENST00000557958 SPATA46Q5T0L3 261 aa14.43□□□□□ -0.1
LDLR-206ENST00000557958 C11orf88Q6PI97 169 aa14.43□□□□□ -0.1
LDLR-206ENST00000557958 LINC00596Q86U02 117 aa14.43□□□□□ -0.1
LDLR-206ENST00000557958 WDR31Q8NA23 367 aa14.43□□□□□ -0.1
LDLR-206ENST00000557958 OR2AK2Q8NG84 335 aa14.43□□□□□ -0.1
LDLR-206ENST00000557958 OR1J1Q8NGS3 322 aa14.43□□□□□ -0.1
LDLR-206ENST00000557958 OR2T35Q8NGX2 323 aa14.43□□□□□ -0.1
LDLR-206ENST00000557958 FAAP24Q9BTP7 215 aa14.43□□□□□ -0.1
LDLR-206ENST00000557958 PKIBQ9C010 78 aa14.43□□□□□ -0.1
LDLR-206ENST00000557958 EHFQ9NZC4 300 aa14.43□□□□□ -0.1
LDLR-206ENST00000557958 VSIG4Q9Y279 399 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 180.6 ms